RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 UQCR11O14957 56 aa6.3□□□□□ -1.4
VPS11-207ENST00000620429 ACYP2P14621 99 aa6.29□□□□□ -1.4
VPS11-207ENST00000620429 ZNF861PO60384 105 aa6.28□□□□□ -1.4
VPS11-207ENST00000620429 DNAH9Q9NYC9 4486 aa6.27□□□□□ -1.41
VPS11-207ENST00000620429 DNAH10Q8IVF4 4471 aa6.27□□□□□ -1.41
VPS11-207ENST00000620429 SRRM2Q9UQ35 2752 aaKnown RBP6.25□□□□□ -1.41
VPS11-207ENST00000620429 KMT2CQ8NEZ4 4911 aaKnown RBP6.24□□□□□ -1.41
VPS11-207ENST00000620429 C8orf17Q9NRJ1 99 aa6.24□□□□□ -1.41
VPS11-207ENST00000620429 DYNC2H1Q8NCM8 4307 aaKnown RBP6.24□□□□□ -1.41
VPS11-207ENST00000620429 A0A096LNI7 61 aa6.24□□□□□ -1.41
VPS11-207ENST00000620429 TENM2Q9NT68 2774 aa6.23□□□□□ -1.41
VPS11-207ENST00000620429 SPRR1BP22528 89 aa6.22□□□□□ -1.41
VPS11-207ENST00000620429 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
VPS11-207ENST00000620429 DMAC1Q96GE9 116 aa6.21□□□□□ -1.42
VPS11-207ENST00000620429 KRTAP1-5Q9BYS1 174 aa6.21□□□□□ -1.42
VPS11-207ENST00000620429 CSMD3Q7Z407 3707 aa6.21□□□□□ -1.42
VPS11-207ENST00000620429 RYR3Q15413 4870 aa6.21□□□□□ -1.42
VPS11-207ENST00000620429 DNAH7Q8WXX0 4024 aa6.2□□□□□ -1.42
VPS11-207ENST00000620429 Q96NJ1 140 aa6.2□□□□□ -1.42
VPS11-207ENST00000620429 MRPL34Q9BQ48 92 aaKnown RBP6.19□□□□□ -1.42
VPS11-207ENST00000620429 PLECQ15149 4684 aaKnown RBP6.17□□□□□ -1.42
VPS11-207ENST00000620429 KRTAP11-1Q8IUC1 163 aa6.17□□□□□ -1.42
VPS11-207ENST00000620429 KRTAP13-3Q3SY46 172 aa6.16□□□□□ -1.42
VPS11-207ENST00000620429 A0A1B0GVX0 72 aa6.16□□□□□ -1.42
VPS11-207ENST00000620429 CHTF8P0CG12 524 aa6.16□□□□□ -1.42
VPS11-207ENST00000620429 NOTCH2NLQ7Z3S9 236 aa6.15□□□□□ -1.43
VPS11-207ENST00000620429 BIRC6Q9NR09 4857 aa6.14□□□□□ -1.43
VPS11-207ENST00000620429 P0C880 135 aa6.13□□□□□ -1.43
VPS11-207ENST00000620429 APLNQ9ULZ1 77 aa6.13□□□□□ -1.43
VPS11-207ENST00000620429 UBE2DNLQ8IWF7 75 aa6.13□□□□□ -1.43
VPS11-207ENST00000620429 RYR2Q92736 4967 aa6.12□□□□□ -1.43
VPS11-207ENST00000620429 IGLV5-52A0A0A0MRZ9 124 aa6.11□□□□□ -1.43
VPS11-207ENST00000620429 IGLV7-43P04211 117 aa6.11□□□□□ -1.43
VPS11-207ENST00000620429 Q5W150 140 aa6.11□□□□□ -1.43
VPS11-207ENST00000620429 A8MUU9 505 aa6.1□□□□□ -1.43
VPS11-207ENST00000620429 STARD9Q9P2P6 4700 aa6.09□□□□□ -1.43
VPS11-207ENST00000620429 SACSQ9NZJ4 4579 aa6.09□□□□□ -1.43
VPS11-207ENST00000620429 IGLV9-49A0A0B4J1Y8 123 aa6.09□□□□□ -1.43
VPS11-207ENST00000620429 A0A0A0MQY5 61 aa6.08□□□□□ -1.44
VPS11-207ENST00000620429 CDK2AP2O75956 126 aa6.06□□□□□ -1.44
VPS11-207ENST00000620429 C14orf177Q52M58 125 aa6.06□□□□□ -1.44
VPS11-207ENST00000620429 LINC00483Q53H64 154 aa6.06□□□□□ -1.44
VPS11-207ENST00000620429 VPS13DQ5THJ4 4388 aa6.04□□□□□ -1.44
VPS11-207ENST00000620429 NUPR2A6NF83 97 aa6.04□□□□□ -1.44
VPS11-207ENST00000620429 LINC00304Q8N9R0 145 aa6.04□□□□□ -1.44
VPS11-207ENST00000620429 KRTAP13-1Q8IUC0 172 aa6.03□□□□□ -1.44
VPS11-207ENST00000620429 NBDYA0A0U1RRE5 68 aa6.03□□□□□ -1.44
VPS11-207ENST00000620429 PANO1I0J062 215 aa6.03□□□□□ -1.44
VPS11-207ENST00000620429 DNAH2Q9P225 4427 aa6.01□□□□□ -1.45
VPS11-207ENST00000620429 KMT2AQ03164 3969 aa6.01□□□□□ -1.45
VPS11-207ENST00000620429 Q6ZRN7 208 aaPredicted RBP6□□□□□ -1.45
VPS11-207ENST00000620429 EPPK1P58107 5090 aaKnown RBP5.97□□□□□ -1.45
VPS11-207ENST00000620429 LY6G6CO95867 125 aa5.97□□□□□ -1.45
VPS11-207ENST00000620429 IGKV2-30P06310 120 aa5.96□□□□□ -1.46
VPS11-207ENST00000620429 ANAPC11Q9NYG5 84 aa5.96□□□□□ -1.46
VPS11-207ENST00000620429 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.96□□□□□ -1.46
VPS11-207ENST00000620429 H0YAA0 97 aa5.94□□□□□ -1.46
VPS11-207ENST00000620429 FAM229AH3BQW9 127 aa5.94□□□□□ -1.46
VPS11-207ENST00000620429 SPINK6Q6UWN8 80 aa5.94□□□□□ -1.46
VPS11-207ENST00000620429 HECTD4Q9Y4D8 3996 aa5.94□□□□□ -1.46
VPS11-207ENST00000620429 KRTAP17-1Q9BYP8 105 aa5.93□□□□□ -1.46
VPS11-207ENST00000620429 SPACA4Q8TDM5 124 aa5.93□□□□□ -1.46
VPS11-207ENST00000620429 A0A087WTM6 91 aa5.91□□□□□ -1.46
VPS11-207ENST00000620429 DNAH17Q9UFH2 4485 aa5.91□□□□□ -1.46
VPS11-207ENST00000620429 Q6ZSA8 131 aa5.91□□□□□ -1.46
VPS11-207ENST00000620429 DNAH6Q9C0G6 4158 aa5.91□□□□□ -1.46
VPS11-207ENST00000620429 KRTAP16-1A8MUX0 517 aa5.9□□□□□ -1.46
VPS11-207ENST00000620429 C20orf166-AS1Q96NR2 134 aa5.9□□□□□ -1.46
VPS11-207ENST00000620429 PSORS1C2Q9UIG4 136 aa5.9□□□□□ -1.46
VPS11-207ENST00000620429 HERC2O95714 4834 aa5.89□□□□□ -1.47
VPS11-207ENST00000620429 DNAH8Q96JB1 4490 aa5.88□□□□□ -1.47
VPS11-207ENST00000620429 FRAS1Q86XX4 4008 aa5.88□□□□□ -1.47
VPS11-207ENST00000620429 IGKV2D-30A0A075B6S6 120 aa5.87□□□□□ -1.47
VPS11-207ENST00000620429 NDUFAF8A1L188 74 aa5.87□□□□□ -1.47
VPS11-207ENST00000620429 HYDINQ4G0P3 5121 aa5.87□□□□□ -1.47
VPS11-207ENST00000620429 CIRBP-AS1Q8TBR5 109 aa5.85□□□□□ -1.47
VPS11-207ENST00000620429 SPINT4Q6UDR6 99 aa5.83□□□□□ -1.48
VPS11-207ENST00000620429 SSBP3-AS1Q7Z2R9 100 aa5.83□□□□□ -1.48
VPS11-207ENST00000620429 CRIPTQ9P021 101 aa5.83□□□□□ -1.48
VPS11-207ENST00000620429 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
VPS11-207ENST00000620429 DNAH11Q96DT5 4516 aa5.82□□□□□ -1.48
VPS11-207ENST00000620429 DNAH5Q8TE73 4624 aa5.81□□□□□ -1.48
VPS11-207ENST00000620429 A0A1B0GVY2 172 aa5.81□□□□□ -1.48
VPS11-207ENST00000620429 A0A1B0GU33 70 aa5.8□□□□□ -1.48
VPS11-207ENST00000620429 K7ERS5 55 aa5.79□□□□□ -1.48
VPS11-207ENST00000620429 KRTAP10-2P60368 255 aa5.78□□□□□ -1.48
VPS11-207ENST00000620429 SPINK1P00995 79 aa5.77□□□□□ -1.49
VPS11-207ENST00000620429 H1FX-AS1Q4G0G2 97 aa5.77□□□□□ -1.49
VPS11-207ENST00000620429 FAT2Q9NYQ8 4349 aa5.76□□□□□ -1.49
VPS11-207ENST00000620429 FLG2Q5D862 2391 aaPredicted RBP5.75□□□□□ -1.49
VPS11-207ENST00000620429 PKD1P98161 4303 aa5.74□□□□□ -1.49
VPS11-207ENST00000620429 LRP1BQ9NZR2 4599 aa5.74□□□□□ -1.49
VPS11-207ENST00000620429 TYMSOSQ8TAI1 123 aa5.73□□□□□ -1.49
VPS11-207ENST00000620429 TPRXLQ17RH7 258 aa5.71□□□□□ -1.49
VPS11-207ENST00000620429 DYNC1H1Q14204 4646 aaKnown RBP5.71□□□□□ -1.5
VPS11-207ENST00000620429 KRTAP10-1P60331 282 aa5.69□□□□□ -1.5
VPS11-207ENST00000620429 PCLOQ9Y6V0 5065 aa5.66□□□□□ -1.5
VPS11-207ENST00000620429 Q8N1X5 172 aa5.66□□□□□ -1.5
VPS11-207ENST00000620429 KRTAP13-2Q52LG2 175 aa5.65□□□□□ -1.5
VPS11-207ENST00000620429 LUZP6Q538Z0 58 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms