RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 Q6ZR54 194 aa5.89□□□□□ -1.47
TNFAIP3-210ENST00000620204 PLAC8Q9NZF1 115 aa5.89□□□□□ -1.47
TNFAIP3-210ENST00000620204 ANK2Q01484 3957 aa5.88□□□□□ -1.47
TNFAIP3-210ENST00000620204 IGKV2D-30A0A075B6S6 120 aa5.87□□□□□ -1.47
TNFAIP3-210ENST00000620204 IGKV2-30P06310 120 aa5.87□□□□□ -1.47
TNFAIP3-210ENST00000620204 RTL8CO15255 209 aa5.87□□□□□ -1.47
TNFAIP3-210ENST00000620204 PLA2G1BP04054 148 aaKnown RBP5.86□□□□□ -1.47
TNFAIP3-210ENST00000620204 KRTAP1-5Q9BYS1 174 aa5.86□□□□□ -1.47
TNFAIP3-210ENST00000620204 SPRR1BP22528 89 aa5.85□□□□□ -1.47
TNFAIP3-210ENST00000620204 Q96NJ1 140 aa5.84□□□□□ -1.47
TNFAIP3-210ENST00000620204 LY6G6CO95867 125 aa5.84□□□□□ -1.48
TNFAIP3-210ENST00000620204 PANO1I0J062 215 aa5.83□□□□□ -1.48
TNFAIP3-210ENST00000620204 C14orf177Q52M58 125 aa5.83□□□□□ -1.48
TNFAIP3-210ENST00000620204 ZNF706Q9Y5V0 76 aaPredicted RBP5.82□□□□□ -1.48
TNFAIP3-210ENST00000620204 C1orf134Q5TEV5 83 aa5.81□□□□□ -1.48
TNFAIP3-210ENST00000620204 MEGF8Q7Z7M0 2845 aa5.8□□□□□ -1.48
TNFAIP3-210ENST00000620204 NUPR2A6NF83 97 aa5.8□□□□□ -1.48
TNFAIP3-210ENST00000620204 CRIPTQ9P021 101 aa5.79□□□□□ -1.48
TNFAIP3-210ENST00000620204 SPATA8Q6RVD6 105 aa5.79□□□□□ -1.48
TNFAIP3-210ENST00000620204 DNHD1Q96M86 4753 aa5.79□□□□□ -1.48
TNFAIP3-210ENST00000620204 APLNQ9ULZ1 77 aa5.78□□□□□ -1.48
TNFAIP3-210ENST00000620204 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.77□□□□□ -1.49
TNFAIP3-210ENST00000620204 CMYA5Q8N3K9 4069 aa5.77□□□□□ -1.49
TNFAIP3-210ENST00000620204 FBN3Q75N90 2809 aa5.77□□□□□ -1.49
TNFAIP3-210ENST00000620204 HUWE1Q7Z6Z7 4374 aaKnown RBP5.76□□□□□ -1.49
TNFAIP3-210ENST00000620204 ASB16-AS1Q495Z4 193 aa5.75□□□□□ -1.49
TNFAIP3-210ENST00000620204 DMAC1Q96GE9 116 aa5.75□□□□□ -1.49
TNFAIP3-210ENST00000620204 PSORS1C2Q9UIG4 136 aa5.75□□□□□ -1.49
TNFAIP3-210ENST00000620204 NBDYA0A0U1RRE5 68 aa5.74□□□□□ -1.49
TNFAIP3-210ENST00000620204 WWC2-AS2Q96NR7 200 aa5.74□□□□□ -1.49
TNFAIP3-210ENST00000620204 FAM229AH3BQW9 127 aa5.73□□□□□ -1.49
TNFAIP3-210ENST00000620204 Q8N1X5 172 aa5.73□□□□□ -1.49
TNFAIP3-210ENST00000620204 ZNF861PO60384 105 aa5.68□□□□□ -1.5
TNFAIP3-210ENST00000620204 SPACA4Q8TDM5 124 aa5.68□□□□□ -1.5
TNFAIP3-210ENST00000620204 SSBP3-AS1Q7Z2R9 100 aa5.68□□□□□ -1.5
TNFAIP3-210ENST00000620204 KRTAP13-1Q8IUC0 172 aa5.67□□□□□ -1.5
TNFAIP3-210ENST00000620204 DNAH9Q9NYC9 4486 aa5.67□□□□□ -1.5
TNFAIP3-210ENST00000620204 PRKDCP78527 4128 aaKnown RBP5.67□□□□□ -1.5
TNFAIP3-210ENST00000620204 LYSTQ99698 3801 aa5.64□□□□□ -1.51
TNFAIP3-210ENST00000620204 IGLV5-52A0A0A0MRZ9 124 aa5.64□□□□□ -1.51
TNFAIP3-210ENST00000620204 DNAH10Q8IVF4 4471 aa5.63□□□□□ -1.51
TNFAIP3-210ENST00000620204 IGLV7-43P04211 117 aa5.63□□□□□ -1.51
TNFAIP3-210ENST00000620204 LINC00483Q53H64 154 aa5.62□□□□□ -1.51
TNFAIP3-210ENST00000620204 DNAH3Q8TD57 4116 aa5.62□□□□□ -1.51
TNFAIP3-210ENST00000620204 KRTAP13-3Q3SY46 172 aa5.61□□□□□ -1.51
TNFAIP3-210ENST00000620204 K7ERS5 55 aa5.61□□□□□ -1.51
TNFAIP3-210ENST00000620204 ROMO1P60602 79 aa5.6□□□□□ -1.51
TNFAIP3-210ENST00000620204 A0A087WTM6 91 aa5.6□□□□□ -1.51
TNFAIP3-210ENST00000620204 KRTAP25-1Q3LHN0 102 aa5.59□□□□□ -1.51
TNFAIP3-210ENST00000620204 SPINT4Q6UDR6 99 aa5.58□□□□□ -1.52
TNFAIP3-210ENST00000620204 PLECQ15149 4684 aaKnown RBP5.58□□□□□ -1.52
TNFAIP3-210ENST00000620204 A0A1B0GU33 70 aa5.56□□□□□ -1.52
TNFAIP3-210ENST00000620204 LINC00304Q8N9R0 145 aa5.55□□□□□ -1.52
TNFAIP3-210ENST00000620204 STARD9Q9P2P6 4700 aa5.54□□□□□ -1.52
TNFAIP3-210ENST00000620204 A8MUU9 505 aa5.53□□□□□ -1.52
TNFAIP3-210ENST00000620204 Q6ZRN7 208 aaPredicted RBP5.53□□□□□ -1.52
TNFAIP3-210ENST00000620204 Q6ZSA8 131 aa5.53□□□□□ -1.52
TNFAIP3-210ENST00000620204 TYMSOSQ8TAI1 123 aa5.52□□□□□ -1.53
TNFAIP3-210ENST00000620204 H0YAA0 97 aa5.52□□□□□ -1.53
TNFAIP3-210ENST00000620204 DNAH7Q8WXX0 4024 aa5.51□□□□□ -1.53
TNFAIP3-210ENST00000620204 KRTAP21-3Q3LHN1 58 aa5.51□□□□□ -1.53
TNFAIP3-210ENST00000620204 KRTAP10-2P60368 255 aa5.51□□□□□ -1.53
TNFAIP3-210ENST00000620204 A0A0D9SG42 100 aa5.49□□□□□ -1.53
TNFAIP3-210ENST00000620204 C9orf92A6NGG3 77 aa5.47□□□□□ -1.53
TNFAIP3-210ENST00000620204 KMT2AQ03164 3969 aa5.45□□□□□ -1.54
TNFAIP3-210ENST00000620204 SMR3BP02814 79 aaPredicted RBP5.45□□□□□ -1.54
TNFAIP3-210ENST00000620204 H1FX-AS1Q4G0G2 97 aa5.43□□□□□ -1.54
TNFAIP3-210ENST00000620204 KRTAP13-2Q52LG2 175 aa5.42□□□□□ -1.54
TNFAIP3-210ENST00000620204 KRTAP10-1P60331 282 aa5.41□□□□□ -1.54
TNFAIP3-210ENST00000620204 NDUFAF8A1L188 74 aa5.41□□□□□ -1.54
TNFAIP3-210ENST00000620204 KRTAP16-1A8MUX0 517 aa5.41□□□□□ -1.54
TNFAIP3-210ENST00000620204 P0C880 135 aa5.41□□□□□ -1.54
TNFAIP3-210ENST00000620204 DNAH1Q9P2D7 4330 aa5.39□□□□□ -1.55
TNFAIP3-210ENST00000620204 ALMS1Q8TCU4 4167 aa5.38□□□□□ -1.55
TNFAIP3-210ENST00000620204 FRAS1Q86XX4 4008 aa5.37□□□□□ -1.55
TNFAIP3-210ENST00000620204 VPS13DQ5THJ4 4388 aa5.37□□□□□ -1.55
TNFAIP3-210ENST00000620204 C10orf95Q9H7T3 257 aa5.36□□□□□ -1.55
TNFAIP3-210ENST00000620204 COX6B2Q6YFQ2 88 aa5.34□□□□□ -1.55
TNFAIP3-210ENST00000620204 DNAH2Q9P225 4427 aa5.31□□□□□ -1.56
TNFAIP3-210ENST00000620204 DNAH8Q96JB1 4490 aa5.3□□□□□ -1.56
TNFAIP3-210ENST00000620204 RPL37P61927 97 aaKnown RBP5.3□□□□□ -1.56
TNFAIP3-210ENST00000620204 DNAH11Q96DT5 4516 aa5.3□□□□□ -1.56
TNFAIP3-210ENST00000620204 HYDINQ4G0P3 5121 aa5.3□□□□□ -1.56
TNFAIP3-210ENST00000620204 DYNC2H1Q8NCM8 4307 aaKnown RBP5.28□□□□□ -1.56
TNFAIP3-210ENST00000620204 C20orf166-AS1Q96NR2 134 aa5.26□□□□□ -1.57
TNFAIP3-210ENST00000620204 TPRXLQ17RH7 258 aa5.24□□□□□ -1.57
TNFAIP3-210ENST00000620204 DNAH6Q9C0G6 4158 aa5.24□□□□□ -1.57
TNFAIP3-210ENST00000620204 DNAH17Q9UFH2 4485 aa5.24□□□□□ -1.57
TNFAIP3-210ENST00000620204 KRTAP3-1Q9BYR8 98 aa5.24□□□□□ -1.57
TNFAIP3-210ENST00000620204 KRTAP1-4P0C5Y4 121 aa5.21□□□□□ -1.57
TNFAIP3-210ENST00000620204 HECTD4Q9Y4D8 3996 aa5.19□□□□□ -1.58
TNFAIP3-210ENST00000620204 SACSQ9NZJ4 4579 aa5.18□□□□□ -1.58
TNFAIP3-210ENST00000620204 KMT2CQ8NEZ4 4911 aaKnown RBP5.18□□□□□ -1.58
TNFAIP3-210ENST00000620204 PKHD1P08F94 4074 aa5.16□□□□□ -1.58
TNFAIP3-210ENST00000620204 A0A0A0MQY5 61 aa5.15□□□□□ -1.58
TNFAIP3-210ENST00000620204 DNAH5Q8TE73 4624 aa5.15□□□□□ -1.58
TNFAIP3-210ENST00000620204 LRP1BQ9NZR2 4599 aa5.15□□□□□ -1.59
TNFAIP3-210ENST00000620204 KRTAP13-4Q3LI77 160 aa5.14□□□□□ -1.59
TNFAIP3-210ENST00000620204 FAT1Q14517 4588 aa5.13□□□□□ -1.59
TNFAIP3-210ENST00000620204 A0A1B0GVY2 172 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms