RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 TGP01266 2768 aa7.5□□□□□ -1.21
MATR3-227ENST00000618441 KRTAP7-1Q8IUC3 87 aa7.49□□□□□ -1.21
MATR3-227ENST00000618441 RTL8CO15255 209 aa7.49□□□□□ -1.21
MATR3-227ENST00000618441 MRPL34Q9BQ48 92 aaKnown RBP7.47□□□□□ -1.21
MATR3-227ENST00000618441 A0A087X002 238 aa7.45□□□□□ -1.22
MATR3-227ENST00000618441 NOTCH2NLQ7Z3S9 236 aa7.45□□□□□ -1.22
MATR3-227ENST00000618441 DNAH10OSP0CZ25 163 aa7.43□□□□□ -1.22
MATR3-227ENST00000618441 SPATA8Q6RVD6 105 aa7.42□□□□□ -1.22
MATR3-227ENST00000618441 CIRBP-AS1Q8TBR5 109 aa7.42□□□□□ -1.22
MATR3-227ENST00000618441 LY6G6CO95867 125 aa7.41□□□□□ -1.22
MATR3-227ENST00000618441 ANAPC11Q9NYG5 84 aa7.41□□□□□ -1.22
MATR3-227ENST00000618441 LINC01556Q5JQF7 62 aa7.41□□□□□ -1.22
MATR3-227ENST00000618441 C20orf166-AS1Q96NR2 134 aa7.4□□□□□ -1.22
MATR3-227ENST00000618441 A0A1B0GVX0 72 aa7.4□□□□□ -1.22
MATR3-227ENST00000618441 Q5W150 140 aa7.4□□□□□ -1.22
MATR3-227ENST00000618441 COL7A1Q02388 2944 aa7.39□□□□□ -1.23
MATR3-227ENST00000618441 SSBP3-AS1Q7Z2R9 100 aa7.39□□□□□ -1.23
MATR3-227ENST00000618441 IGKV2D-30A0A075B6S6 120 aa7.38□□□□□ -1.23
MATR3-227ENST00000618441 IGKV2-30P06310 120 aa7.38□□□□□ -1.23
MATR3-227ENST00000618441 CSMD3Q7Z407 3707 aa7.38□□□□□ -1.23
MATR3-227ENST00000618441 TLX1NBP0CAT3 122 aa7.37□□□□□ -1.23
MATR3-227ENST00000618441 KRTAP11-1Q8IUC1 163 aa7.34□□□□□ -1.23
MATR3-227ENST00000618441 ZNF861PO60384 105 aa7.33□□□□□ -1.24
MATR3-227ENST00000618441 P0C880 135 aa7.32□□□□□ -1.24
MATR3-227ENST00000618441 ASB16-AS1Q495Z4 193 aa7.31□□□□□ -1.24
MATR3-227ENST00000618441 KRTAP25-1Q3LHN0 102 aa7.28□□□□□ -1.24
MATR3-227ENST00000618441 IGLV5-52A0A0A0MRZ9 124 aa7.27□□□□□ -1.25
MATR3-227ENST00000618441 ANK2Q01484 3957 aa7.26□□□□□ -1.25
MATR3-227ENST00000618441 LINC00483Q53H64 154 aa7.26□□□□□ -1.25
MATR3-227ENST00000618441 DMAC1Q96GE9 116 aa7.25□□□□□ -1.25
MATR3-227ENST00000618441 Q96NJ1 140 aa7.25□□□□□ -1.25
MATR3-227ENST00000618441 A8MUU9 505 aa7.23□□□□□ -1.25
MATR3-227ENST00000618441 Q8N1X5 172 aa7.23□□□□□ -1.25
MATR3-227ENST00000618441 C14orf177Q52M58 125 aa7.21□□□□□ -1.25
MATR3-227ENST00000618441 H3BNG1 76 aa7.19□□□□□ -1.26
MATR3-227ENST00000618441 IGLV7-43P04211 117 aa7.18□□□□□ -1.26
MATR3-227ENST00000618441 SPRR1BP22528 89 aa7.17□□□□□ -1.26
MATR3-227ENST00000618441 LINC00304Q8N9R0 145 aa7.15□□□□□ -1.26
MATR3-227ENST00000618441 NUPR2A6NF83 97 aa7.15□□□□□ -1.26
MATR3-227ENST00000618441 MEGF8Q7Z7M0 2845 aa7.12□□□□□ -1.27
MATR3-227ENST00000618441 DNHD1Q96M86 4753 aa7.11□□□□□ -1.27
MATR3-227ENST00000618441 PANO1I0J062 215 aa7.11□□□□□ -1.27
MATR3-227ENST00000618441 FBN3Q75N90 2809 aa7.11□□□□□ -1.27
MATR3-227ENST00000618441 KRTAP1-5Q9BYS1 174 aa7.08□□□□□ -1.28
MATR3-227ENST00000618441 A0A1B0GU33 70 aa7.06□□□□□ -1.28
MATR3-227ENST00000618441 PSORS1C2Q9UIG4 136 aa7.04□□□□□ -1.28
MATR3-227ENST00000618441 H0YAA0 97 aa7.04□□□□□ -1.28
MATR3-227ENST00000618441 Q6ZSA8 131 aa7.03□□□□□ -1.28
MATR3-227ENST00000618441 WWC2-AS2Q96NR7 200 aa7.03□□□□□ -1.28
MATR3-227ENST00000618441 LYSTQ99698 3801 aa7.02□□□□□ -1.29
MATR3-227ENST00000618441 NBDYA0A0U1RRE5 68 aa7.02□□□□□ -1.29
MATR3-227ENST00000618441 A0A0D9SG42 100 aa7.01□□□□□ -1.29
MATR3-227ENST00000618441 SPACA4Q8TDM5 124 aa7.01□□□□□ -1.29
MATR3-227ENST00000618441 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.01□□□□□ -1.29
MATR3-227ENST00000618441 CAMK2N1Q7Z7J9 78 aa7□□□□□ -1.29
MATR3-227ENST00000618441 TYMSOSQ8TAI1 123 aa7□□□□□ -1.29
MATR3-227ENST00000618441 KRTAP13-3Q3SY46 172 aa6.99□□□□□ -1.29
MATR3-227ENST00000618441 APLNQ9ULZ1 77 aa6.97□□□□□ -1.29
MATR3-227ENST00000618441 C10orf95Q9H7T3 257 aa6.96□□□□□ -1.3
MATR3-227ENST00000618441 HUWE1Q7Z6Z7 4374 aaKnown RBP6.96□□□□□ -1.3
MATR3-227ENST00000618441 PRKDCP78527 4128 aaKnown RBP6.92□□□□□ -1.3
MATR3-227ENST00000618441 KRTAP13-1Q8IUC0 172 aa6.9□□□□□ -1.3
MATR3-227ENST00000618441 SMR3BP02814 79 aaPredicted RBP6.9□□□□□ -1.3
MATR3-227ENST00000618441 H1FX-AS1Q4G0G2 97 aa6.89□□□□□ -1.31
MATR3-227ENST00000618441 DNAH10Q8IVF4 4471 aa6.88□□□□□ -1.31
MATR3-227ENST00000618441 CMYA5Q8N3K9 4069 aa6.88□□□□□ -1.31
MATR3-227ENST00000618441 A0A087WTM6 91 aa6.83□□□□□ -1.32
MATR3-227ENST00000618441 DNAH9Q9NYC9 4486 aa6.82□□□□□ -1.32
MATR3-227ENST00000618441 ALMS1Q8TCU4 4167 aa6.81□□□□□ -1.32
MATR3-227ENST00000618441 PLECQ15149 4684 aaKnown RBP6.79□□□□□ -1.32
MATR3-227ENST00000618441 TPRXLQ17RH7 258 aa6.78□□□□□ -1.32
MATR3-227ENST00000618441 DNAH7Q8WXX0 4024 aa6.77□□□□□ -1.33
MATR3-227ENST00000618441 STARD9Q9P2P6 4700 aa6.76□□□□□ -1.33
MATR3-227ENST00000618441 COX6B2Q6YFQ2 88 aa6.75□□□□□ -1.33
MATR3-227ENST00000618441 C9orf92A6NGG3 77 aa6.75□□□□□ -1.33
MATR3-227ENST00000618441 RPL37P61927 97 aaKnown RBP6.73□□□□□ -1.33
MATR3-227ENST00000618441 KMT2AQ03164 3969 aa6.72□□□□□ -1.33
MATR3-227ENST00000618441 KRTAP10-2P60368 255 aa6.72□□□□□ -1.33
MATR3-227ENST00000618441 Q6ZRN7 208 aaPredicted RBP6.68□□□□□ -1.34
MATR3-227ENST00000618441 DNAH3Q8TD57 4116 aa6.66□□□□□ -1.34
MATR3-227ENST00000618441 KRTAP15-1Q3LI76 137 aa6.64□□□□□ -1.35
MATR3-227ENST00000618441 KRTAP23-1A1A580 65 aa6.6□□□□□ -1.35
MATR3-227ENST00000618441 KRTAP13-2Q52LG2 175 aa6.6□□□□□ -1.35
MATR3-227ENST00000618441 KRTAP10-1P60331 282 aa6.58□□□□□ -1.36
MATR3-227ENST00000618441 FRAS1Q86XX4 4008 aa6.57□□□□□ -1.36
MATR3-227ENST00000618441 R4GN34 69 aa6.55□□□□□ -1.36
MATR3-227ENST00000618441 DNAH1Q9P2D7 4330 aa6.53□□□□□ -1.36
MATR3-227ENST00000618441 KRTAP3-1Q9BYR8 98 aa6.52□□□□□ -1.37
MATR3-227ENST00000618441 HYDINQ4G0P3 5121 aa6.51□□□□□ -1.37
MATR3-227ENST00000618441 VPS13DQ5THJ4 4388 aa6.5□□□□□ -1.37
MATR3-227ENST00000618441 DNAH11Q96DT5 4516 aa6.5□□□□□ -1.37
MATR3-227ENST00000618441 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
MATR3-227ENST00000618441 DNAH8Q96JB1 4490 aa6.49□□□□□ -1.37
MATR3-227ENST00000618441 S4R3F8 94 aa6.47□□□□□ -1.37
MATR3-227ENST00000618441 DNAH17Q9UFH2 4485 aa6.46□□□□□ -1.38
MATR3-227ENST00000618441 DNAH6Q9C0G6 4158 aa6.45□□□□□ -1.38
MATR3-227ENST00000618441 DNAH2Q9P225 4427 aa6.44□□□□□ -1.38
MATR3-227ENST00000618441 KRTAP12-2P59991 146 aa6.39□□□□□ -1.39
MATR3-227ENST00000618441 KMT2CQ8NEZ4 4911 aaKnown RBP6.38□□□□□ -1.39
MATR3-227ENST00000618441 KRTAP21-3Q3LHN1 58 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms