RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 LYSTQ99698 3801 aa0.28□□□□□ -2.36
RFC3-203ENST00000616236 RIF1Q5UIP0 2472 aaKnown RBP0.27□□□□□ -2.37
RFC3-203ENST00000616236 MUC12Q9UKN1 5478 aa0.27□□□□□ -2.37
RFC3-203ENST00000616236 PRRC2CQ9Y520 2896 aaKnown RBP0.27□□□□□ -2.37
RFC3-203ENST00000616236 KIF1AQ12756 1690 aa0.27□□□□□ -2.37
RFC3-203ENST00000616236 USP9YO00507 2555 aaPredicted RBP0.26□□□□□ -2.37
RFC3-203ENST00000616236 SPRR2BP35325 72 aa0.26□□□□□ -2.37
RFC3-203ENST00000616236 NCBP2-AS2Q69YL0 99 aa0.26□□□□□ -2.37
RFC3-203ENST00000616236 USH2AO75445 5202 aa0.26□□□□□ -2.37
RFC3-203ENST00000616236 ANKRD36CQ5JPF3 1778 aa0.26□□□□□ -2.37
RFC3-203ENST00000616236 CELSR3Q9NYQ7 3312 aa0.26□□□□□ -2.37
RFC3-203ENST00000616236 M0R1W7 72 aa0.25□□□□□ -2.37
RFC3-203ENST00000616236 FCER1GP30273 86 aa0.25□□□□□ -2.37
RFC3-203ENST00000616236 K7EMI3 77 aa0.24□□□□□ -2.37
RFC3-203ENST00000616236 CROCC2H7BZ55 1655 aa0.24□□□□□ -2.37
RFC3-203ENST00000616236 HERC2O95714 4834 aa0.23□□□□□ -2.37
RFC3-203ENST00000616236 UGGT1Q9NYU2 1555 aa0.23□□□□□ -2.37
RFC3-203ENST00000616236 PRXQ9BXM0 1461 aa0.22□□□□□ -2.37
RFC3-203ENST00000616236 GCN1Q92616 2671 aaKnown RBP0.22□□□□□ -2.37
RFC3-203ENST00000616236 KALRNO60229 2985 aa0.22□□□□□ -2.37
RFC3-203ENST00000616236 RPS27P42677 84 aaKnown RBP0.21□□□□□ -2.38
RFC3-203ENST00000616236 RPS27LQ71UM5 84 aaKnown RBP0.21□□□□□ -2.38
RFC3-203ENST00000616236 CPS1P31327 1500 aa0.21□□□□□ -2.38
RFC3-203ENST00000616236 TENM2Q9NT68 2774 aa0.21□□□□□ -2.38
RFC3-203ENST00000616236 ITPR1Q14643 2758 aa0.2□□□□□ -2.38
RFC3-203ENST00000616236 PRLHP81277 87 aa0.2□□□□□ -2.38
RFC3-203ENST00000616236 NMES1Q9C002 83 aa0.2□□□□□ -2.38
RFC3-203ENST00000616236 C6orf48Q9UBA6 75 aa0.2□□□□□ -2.38
RFC3-203ENST00000616236 LAMA3Q16787 3333 aa0.19□□□□□ -2.38
RFC3-203ENST00000616236 A0A0C4DFX4 3053 aa0.19□□□□□ -2.38
RFC3-203ENST00000616236 DEFB106AQ8N104 65 aa0.19□□□□□ -2.38
RFC3-203ENST00000616236 S4R3F8 94 aa0.19□□□□□ -2.38
RFC3-203ENST00000616236 MGAM2Q2M2H8 2515 aa0.19□□□□□ -2.38
RFC3-203ENST00000616236 PKD1P98161 4303 aa0.19□□□□□ -2.38
RFC3-203ENST00000616236 CDC42BPAQ5VT25 1732 aa0.18□□□□□ -2.38
RFC3-203ENST00000616236 MXRA5Q9NR99 2828 aa0.18□□□□□ -2.38
RFC3-203ENST00000616236 SERF2P84101 59 aa0.18□□□□□ -2.38
RFC3-203ENST00000616236 UTP20O75691 2785 aaKnown RBP0.18□□□□□ -2.38
RFC3-203ENST00000616236 TOGARAM1Q9Y4F4 1720 aa0.18□□□□□ -2.38
RFC3-203ENST00000616236 TGP01266 2768 aa0.17□□□□□ -2.38
RFC3-203ENST00000616236 WT1-ASQ06250 92 aa0.17□□□□□ -2.38
RFC3-203ENST00000616236 FAT3Q8TDW7 4589 aa0.17□□□□□ -2.38
RFC3-203ENST00000616236 SPRR2GQ9BYE4 73 aa0.17□□□□□ -2.38
RFC3-203ENST00000616236 CLASP1Q7Z460 1538 aa0.17□□□□□ -2.38
RFC3-203ENST00000616236 MAST1Q9Y2H9 1570 aa0.16□□□□□ -2.38
RFC3-203ENST00000616236 TEX15Q9BXT5 2789 aa0.16□□□□□ -2.38
RFC3-203ENST00000616236 DNHD1Q96M86 4753 aa0.15□□□□□ -2.38
RFC3-203ENST00000616236 CEP290O15078 2479 aa0.15□□□□□ -2.38
RFC3-203ENST00000616236 NBEAL1Q6ZS30 2694 aa0.15□□□□□ -2.39
RFC3-203ENST00000616236 EEA1Q15075 1411 aa0.15□□□□□ -2.39
RFC3-203ENST00000616236 MYO9AB2RTY4 2548 aa0.15□□□□□ -2.39
RFC3-203ENST00000616236 CEP295Q9C0D2 2601 aa0.15□□□□□ -2.39
RFC3-203ENST00000616236 LRP2P98164 4655 aa0.15□□□□□ -2.39
RFC3-203ENST00000616236 SRCAPQ6ZRS2 3230 aa0.15□□□□□ -2.39
RFC3-203ENST00000616236 CFAP46Q8IYW2 2715 aa0.15□□□□□ -2.39
RFC3-203ENST00000616236 MROH2AA6NES4 1674 aa0.14□□□□□ -2.39
RFC3-203ENST00000616236 ZFHX4Q86UP3 3567 aa0.14□□□□□ -2.39
RFC3-203ENST00000616236 CSMD1Q96PZ7 3565 aa0.14□□□□□ -2.39
RFC3-203ENST00000616236 SPG11Q96JI7 2443 aa0.14□□□□□ -2.39
RFC3-203ENST00000616236 IGIPA6NJ69 53 aa0.14□□□□□ -2.39
RFC3-203ENST00000616236 NF1P21359 2839 aa0.14□□□□□ -2.39
RFC3-203ENST00000616236 LRP1BQ9NZR2 4599 aa0.14□□□□□ -2.39
RFC3-203ENST00000616236 PKHD1P08F94 4074 aa0.13□□□□□ -2.39
RFC3-203ENST00000616236 PREX2Q70Z35 1606 aa0.13□□□□□ -2.39
RFC3-203ENST00000616236 EP400Q96L91 3159 aa0.13□□□□□ -2.39
RFC3-203ENST00000616236 TLN1Q9Y490 2541 aaKnown RBP0.12□□□□□ -2.39
RFC3-203ENST00000616236 TLN2Q9Y4G6 2542 aa0.12□□□□□ -2.39
RFC3-203ENST00000616236 PCNTO95613 3336 aa0.12□□□□□ -2.39
RFC3-203ENST00000616236 MAP1AP78559 2803 aaPredicted RBP0.12□□□□□ -2.39
RFC3-203ENST00000616236 ZZEF1O43149 2961 aa0.11□□□□□ -2.39
RFC3-203ENST00000616236 LAMA2P24043 3122 aaKnown RBP0.11□□□□□ -2.39
RFC3-203ENST00000616236 UNC80Q8N2C7 3258 aa0.11□□□□□ -2.39
RFC3-203ENST00000616236 VPS13BQ7Z7G8 4022 aa0.1□□□□□ -2.39
RFC3-203ENST00000616236 VCANP13611 3396 aa0.1□□□□□ -2.39
RFC3-203ENST00000616236 BOD1L1Q8NFC6 3051 aa0.09□□□□□ -2.39
RFC3-203ENST00000616236 MT4P47944 62 aa0.09□□□□□ -2.4
RFC3-203ENST00000616236 KRTAP19-6Q3LI70 58 aa0.09□□□□□ -2.4
RFC3-203ENST00000616236 SPEGQ15772 3267 aa0.09□□□□□ -2.4
RFC3-203ENST00000616236 DCHS1Q96JQ0 3298 aa0.09□□□□□ -2.4
RFC3-203ENST00000616236 ITPR2Q14571 2701 aa0.09□□□□□ -2.4
RFC3-203ENST00000616236 NBEAQ8NFP9 2946 aa0.09□□□□□ -2.4
RFC3-203ENST00000616236 LAMA1P25391 3075 aa0.08□□□□□ -2.4
RFC3-203ENST00000616236 H3BNG1 76 aa0.08□□□□□ -2.4
RFC3-203ENST00000616236 KRTAP6-2Q3LI66 62 aa0.08□□□□□ -2.4
RFC3-203ENST00000616236 WDR87Q6ZQQ6 2873 aa0.08□□□□□ -2.4
RFC3-203ENST00000616236 SYCP2Q9BX26 1530 aa0.07□□□□□ -2.4
RFC3-203ENST00000616236 MKI67P46013 3256 aaKnown RBP0.07□□□□□ -2.4
RFC3-203ENST00000616236 CEP350Q5VT06 3117 aa0.07□□□□□ -2.4
RFC3-203ENST00000616236 C9orf92A6NGG3 77 aa0.06□□□□□ -2.4
RFC3-203ENST00000616236 FAM186AA6NE01 2351 aa0.06□□□□□ -2.4
RFC3-203ENST00000616236 SZT2Q5T011 3432 aa0.06□□□□□ -2.4
RFC3-203ENST00000616236 SVEP1Q4LDE5 3571 aa0.05□□□□□ -2.4
RFC3-203ENST00000616236 SPRR2AP35326 72 aa0.05□□□□□ -2.4
RFC3-203ENST00000616236 FLGP20930 4061 aaPredicted RBP0.05□□□□□ -2.4
RFC3-203ENST00000616236 TMEM167BQ9NRX6 74 aa0.04□□□□□ -2.4
RFC3-203ENST00000616236 DMXL1Q9Y485 3027 aa0.03□□□□□ -2.4
RFC3-203ENST00000616236 H3BUA1 57 aa0.03□□□□□ -2.4
RFC3-203ENST00000616236 TIMM8BQ9Y5J9 83 aaPredicted RBP0.03□□□□□ -2.4
RFC3-203ENST00000616236 A0A1B0GUL6 1792 aa0.03□□□□□ -2.4
RFC3-203ENST00000616236 AGLP35573 1532 aa0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms