RNA–Protein interactions for RNA: ENST00000616179.4

SYNRG-223, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNRG, Length 4,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-223ENST00000616179 FAM229AH3BQW9 127 aa9.37□□□□□ -0.91
SYNRG-223ENST00000616179 PSORS1C2Q9UIG4 136 aa9.36□□□□□ -0.91
SYNRG-223ENST00000616179 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.36□□□□□ -0.91
SYNRG-223ENST00000616179 SPACA4Q8TDM5 124 aa9.36□□□□□ -0.91
SYNRG-223ENST00000616179 OTOGQ6ZRI0 2925 aa9.35□□□□□ -0.91
SYNRG-223ENST00000616179 PLA2G1BP04054 148 aaKnown RBP9.33□□□□□ -0.92
SYNRG-223ENST00000616179 C1orf134Q5TEV5 83 aa9.33□□□□□ -0.92
SYNRG-223ENST00000616179 Q8N1X5 172 aa9.33□□□□□ -0.92
SYNRG-223ENST00000616179 CRIPTQ9P021 101 aa9.33□□□□□ -0.92
SYNRG-223ENST00000616179 COL7A1Q02388 2944 aa9.32□□□□□ -0.92
SYNRG-223ENST00000616179 Q96NJ1 140 aa9.32□□□□□ -0.92
SYNRG-223ENST00000616179 KRTAP24-1Q3LI83 254 aa9.31□□□□□ -0.92
SYNRG-223ENST00000616179 K7ERS5 55 aa9.31□□□□□ -0.92
SYNRG-223ENST00000616179 CSMD3Q7Z407 3707 aa9.29□□□□□ -0.92
SYNRG-223ENST00000616179 TENM4Q6N022 2769 aa9.29□□□□□ -0.92
SYNRG-223ENST00000616179 NBDYA0A0U1RRE5 68 aa9.29□□□□□ -0.92
SYNRG-223ENST00000616179 ZNF861PO60384 105 aa9.29□□□□□ -0.92
SYNRG-223ENST00000616179 KMT2BQ9UMN6 2715 aaPredicted RBP9.28□□□□□ -0.92
SYNRG-223ENST00000616179 TENM2Q9NT68 2774 aa9.28□□□□□ -0.92
SYNRG-223ENST00000616179 SSBP3-AS1Q7Z2R9 100 aa9.27□□□□□ -0.92
SYNRG-223ENST00000616179 PLAC8Q9NZF1 115 aa9.27□□□□□ -0.93
SYNRG-223ENST00000616179 IGLV5-52A0A0A0MRZ9 124 aa9.26□□□□□ -0.93
SYNRG-223ENST00000616179 WWC2-AS2Q96NR7 200 aa9.25□□□□□ -0.93
SYNRG-223ENST00000616179 SPATA8Q6RVD6 105 aa9.25□□□□□ -0.93
SYNRG-223ENST00000616179 DMAC1Q96GE9 116 aa9.24□□□□□ -0.93
SYNRG-223ENST00000616179 SPINT4Q6UDR6 99 aa9.14□□□□□ -0.95
SYNRG-223ENST00000616179 APLNQ9ULZ1 77 aa9.13□□□□□ -0.95
SYNRG-223ENST00000616179 TGP01266 2768 aa9.12□□□□□ -0.95
SYNRG-223ENST00000616179 A0A087WTM6 91 aa9.12□□□□□ -0.95
SYNRG-223ENST00000616179 ASB16-AS1Q495Z4 193 aa9.11□□□□□ -0.95
SYNRG-223ENST00000616179 IGLV7-43P04211 117 aa9.1□□□□□ -0.95
SYNRG-223ENST00000616179 LY6G6CO95867 125 aa9.09□□□□□ -0.95
SYNRG-223ENST00000616179 KRTAP13-1Q8IUC0 172 aa9.08□□□□□ -0.96
SYNRG-223ENST00000616179 NUPR2A6NF83 97 aa9.07□□□□□ -0.96
SYNRG-223ENST00000616179 LINC00483Q53H64 154 aa9.07□□□□□ -0.96
SYNRG-223ENST00000616179 ANK3Q12955 4377 aaKnown RBP9.05□□□□□ -0.96
SYNRG-223ENST00000616179 A0A1B0GU33 70 aa9.03□□□□□ -0.96
SYNRG-223ENST00000616179 A0A0D9SG42 100 aa8.98□□□□□ -0.97
SYNRG-223ENST00000616179 C9orf92A6NGG3 77 aa8.98□□□□□ -0.97
SYNRG-223ENST00000616179 TYMSOSQ8TAI1 123 aa8.96□□□□□ -0.97
SYNRG-223ENST00000616179 KRTAP25-1Q3LHN0 102 aa8.95□□□□□ -0.98
SYNRG-223ENST00000616179 ROMO1P60602 79 aa8.92□□□□□ -0.98
SYNRG-223ENST00000616179 KRTAP13-3Q3SY46 172 aa8.87□□□□□ -0.99
SYNRG-223ENST00000616179 LINC00304Q8N9R0 145 aa8.85□□□□□ -0.99
SYNRG-223ENST00000616179 FBN3Q75N90 2809 aa8.85□□□□□ -0.99
SYNRG-223ENST00000616179 A8MUU9 505 aa8.83□□□□□ -1
SYNRG-223ENST00000616179 Q6ZRN7 208 aaPredicted RBP8.83□□□□□ -1
SYNRG-223ENST00000616179 Q6ZSA8 131 aa8.83□□□□□ -1
SYNRG-223ENST00000616179 H1FX-AS1Q4G0G2 97 aa8.79□□□□□ -1
SYNRG-223ENST00000616179 H0YAA0 97 aa8.79□□□□□ -1
SYNRG-223ENST00000616179 KRTAP13-2Q52LG2 175 aa8.74□□□□□ -1.01
SYNRG-223ENST00000616179 DNAH10Q8IVF4 4471 aa8.71□□□□□ -1.01
SYNRG-223ENST00000616179 NDUFAF8A1L188 74 aa8.68□□□□□ -1.02
SYNRG-223ENST00000616179 SMR3BP02814 79 aaPredicted RBP8.67□□□□□ -1.02
SYNRG-223ENST00000616179 KRTAP10-2P60368 255 aa8.67□□□□□ -1.02
SYNRG-223ENST00000616179 KRTAP16-1A8MUX0 517 aa8.62□□□□□ -1.03
SYNRG-223ENST00000616179 MEGF8Q7Z7M0 2845 aa8.61□□□□□ -1.03
SYNRG-223ENST00000616179 RPL37P61927 97 aaKnown RBP8.61□□□□□ -1.03
SYNRG-223ENST00000616179 COX6B2Q6YFQ2 88 aa8.59□□□□□ -1.03
SYNRG-223ENST00000616179 C10orf95Q9H7T3 257 aa8.59□□□□□ -1.03
SYNRG-223ENST00000616179 KRTAP10-1P60331 282 aa8.55□□□□□ -1.04
SYNRG-223ENST00000616179 P0C880 135 aa8.49□□□□□ -1.05
SYNRG-223ENST00000616179 ANK2Q01484 3957 aa8.46□□□□□ -1.06
SYNRG-223ENST00000616179 LYSTQ99698 3801 aa8.44□□□□□ -1.06
SYNRG-223ENST00000616179 HUWE1Q7Z6Z7 4374 aaKnown RBP8.41□□□□□ -1.06
SYNRG-223ENST00000616179 C20orf166-AS1Q96NR2 134 aa8.39□□□□□ -1.07
SYNRG-223ENST00000616179 KRTAP1-4P0C5Y4 121 aa8.39□□□□□ -1.07
SYNRG-223ENST00000616179 TPRXLQ17RH7 258 aa8.31□□□□□ -1.08
SYNRG-223ENST00000616179 KRTAP3-1Q9BYR8 98 aa8.31□□□□□ -1.08
SYNRG-223ENST00000616179 DNAH9Q9NYC9 4486 aa8.31□□□□□ -1.08
SYNRG-223ENST00000616179 S4R3F8 94 aa8.3□□□□□ -1.08
SYNRG-223ENST00000616179 ALMS1Q8TCU4 4167 aa8.26□□□□□ -1.09
SYNRG-223ENST00000616179 FRAS1Q86XX4 4008 aa8.25□□□□□ -1.09
SYNRG-223ENST00000616179 DNAH8Q96JB1 4490 aa8.21□□□□□ -1.09
SYNRG-223ENST00000616179 PLECQ15149 4684 aaKnown RBP8.19□□□□□ -1.1
SYNRG-223ENST00000616179 A0A0A0MQY5 61 aa8.18□□□□□ -1.1
SYNRG-223ENST00000616179 KRTAP13-4Q3LI77 160 aa8.15□□□□□ -1.1
SYNRG-223ENST00000616179 LUZP6Q538Z0 58 aa8.14□□□□□ -1.11
SYNRG-223ENST00000616179 DNAH1Q9P2D7 4330 aa8.13□□□□□ -1.11
SYNRG-223ENST00000616179 DNAH17Q9UFH2 4485 aa8.08□□□□□ -1.12
SYNRG-223ENST00000616179 KRTAP12-2P59991 146 aa8.06□□□□□ -1.12
SYNRG-223ENST00000616179 RPS29P62273 56 aaKnown RBP8.04□□□□□ -1.12
SYNRG-223ENST00000616179 DNAH7Q8WXX0 4024 aa8.03□□□□□ -1.12
SYNRG-223ENST00000616179 DNAH11Q96DT5 4516 aa8.03□□□□□ -1.12
SYNRG-223ENST00000616179 M0QZ58 72 aa8.03□□□□□ -1.12
SYNRG-223ENST00000616179 KRTAP10-6P60371 365 aaPredicted RBP8.02□□□□□ -1.13
SYNRG-223ENST00000616179 CMYA5Q8N3K9 4069 aa8.02□□□□□ -1.13
SYNRG-223ENST00000616179 R4GN34 69 aa8□□□□□ -1.13
SYNRG-223ENST00000616179 KRTAP15-1Q3LI76 137 aa7.98□□□□□ -1.13
SYNRG-223ENST00000616179 KMT2AQ03164 3969 aa7.92□□□□□ -1.14
SYNRG-223ENST00000616179 STARD9Q9P2P6 4700 aa7.9□□□□□ -1.14
SYNRG-223ENST00000616179 CAMK2N1Q7Z7J9 78 aa7.9□□□□□ -1.15
SYNRG-223ENST00000616179 PLAC4Q8WY50 150 aa7.89□□□□□ -1.15
SYNRG-223ENST00000616179 LRP1BQ9NZR2 4599 aa7.89□□□□□ -1.15
SYNRG-223ENST00000616179 KRTAP12-1P59990 96 aa7.87□□□□□ -1.15
SYNRG-223ENST00000616179 KRTAP10-8P60410 259 aa7.87□□□□□ -1.15
SYNRG-223ENST00000616179 KRTAP3-2Q9BYR7 98 aa7.84□□□□□ -1.15
SYNRG-223ENST00000616179 DNAH2Q9P225 4427 aa7.84□□□□□ -1.15
SYNRG-223ENST00000616179 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
SYNRG-223ENST00000616179 DNAH3Q8TD57 4116 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms