RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 TLN2Q9Y4G6 2542 aa-1.12□□□□□ -2.59
SNORA28-201ENST00000606769 RNF17Q9BXT8 1623 aaKnown RBP-1.12□□□□□ -2.59
SNORA28-201ENST00000606769 DYNC1H1Q14204 4646 aaKnown RBP-1.12□□□□□ -2.59
SNORA28-201ENST00000606769 CFAP43Q8NDM7 1665 aa-1.13□□□□□ -2.59
SNORA28-201ENST00000606769 DEFB131BA0A096LNP1 70 aa-1.13□□□□□ -2.59
SNORA28-201ENST00000606769 DEFB121Q5J5C9 76 aa-1.13□□□□□ -2.59
SNORA28-201ENST00000606769 Q9H521 79 aa-1.13□□□□□ -2.59
SNORA28-201ENST00000606769 FRYQ5TBA9 3013 aa-1.13□□□□□ -2.59
SNORA28-201ENST00000606769 DNAH7Q8WXX0 4024 aa-1.13□□□□□ -2.59
SNORA28-201ENST00000606769 RIF1Q5UIP0 2472 aaKnown RBP-1.14□□□□□ -2.59
SNORA28-201ENST00000606769 CRIP1P50238 77 aa-1.14□□□□□ -2.59
SNORA28-201ENST00000606769 PARP4Q9UKK3 1724 aaKnown RBP-1.15□□□□□ -2.59
SNORA28-201ENST00000606769 TOGARAM1Q9Y4F4 1720 aa-1.15□□□□□ -2.59
SNORA28-201ENST00000606769 USP9XQ93008 2570 aaPredicted RBP-1.15□□□□□ -2.59
SNORA28-201ENST00000606769 MT1XP80297 61 aa-1.15□□□□□ -2.59
SNORA28-201ENST00000606769 CD163L1Q9NR16 1453 aa-1.16□□□□□ -2.59
SNORA28-201ENST00000606769 RPS27P42677 84 aaKnown RBP-1.16□□□□□ -2.6
SNORA28-201ENST00000606769 WT1-ASQ06250 92 aa-1.16□□□□□ -2.6
SNORA28-201ENST00000606769 ATP5EP2Q5VTU8 51 aa-1.16□□□□□ -2.6
SNORA28-201ENST00000606769 RPS27LQ71UM5 84 aaKnown RBP-1.16□□□□□ -2.6
SNORA28-201ENST00000606769 KCNQ1DNQ9H478 68 aa-1.16□□□□□ -2.6
SNORA28-201ENST00000606769 KIAA0586Q9BVV6 1533 aa-1.16□□□□□ -2.6
SNORA28-201ENST00000606769 SPENQ96T58 3664 aaKnown RBP-1.17□□□□□ -2.6
SNORA28-201ENST00000606769 ARHGAP35Q9NRY4 1499 aa-1.17□□□□□ -2.6
SNORA28-201ENST00000606769 SPTBN5Q9NRC6 3674 aaKnown RBP-1.17□□□□□ -2.6
SNORA28-201ENST00000606769 KANTRA0A1W2PQU2 76 aa-1.17□□□□□ -2.6
SNORA28-201ENST00000606769 SMIM13P0DJ93 91 aa-1.17□□□□□ -2.6
SNORA28-201ENST00000606769 KRTAP8-1Q8IUC2 63 aa-1.17□□□□□ -2.6
SNORA28-201ENST00000606769 BPTFQ12830 3046 aa-1.18□□□□□ -2.6
SNORA28-201ENST00000606769 DNAH17Q9UFH2 4485 aa-1.18□□□□□ -2.6
SNORA28-201ENST00000606769 IGLV5-48A0A075B6I7 105 aa-1.18□□□□□ -2.6
SNORA28-201ENST00000606769 UACAQ9BZF9 1416 aa-1.18□□□□□ -2.6
SNORA28-201ENST00000606769 THOC2Q8NI27 1593 aaKnown RBP-1.18□□□□□ -2.6
SNORA28-201ENST00000606769 KDM5DQ9BY66 1539 aa-1.19□□□□□ -2.6
SNORA28-201ENST00000606769 KIF1AQ12756 1690 aa-1.19□□□□□ -2.6
SNORA28-201ENST00000606769 INO80Q9ULG1 1556 aaPredicted RBP-1.19□□□□□ -2.6
SNORA28-201ENST00000606769 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.19□□□□□ -2.6
SNORA28-201ENST00000606769 SRCAPQ6ZRS2 3230 aa-1.19□□□□□ -2.6
SNORA28-201ENST00000606769 NRAPQ86VF7 1730 aa-1.2□□□□□ -2.6
SNORA28-201ENST00000606769 NCBP2-AS2Q69YL0 99 aa-1.2□□□□□ -2.6
SNORA28-201ENST00000606769 CELSR3Q9NYQ7 3312 aa-1.2□□□□□ -2.6
SNORA28-201ENST00000606769 CHD7Q9P2D1 2997 aa-1.2□□□□□ -2.6
SNORA28-201ENST00000606769 CDC42BPAQ5VT25 1732 aa-1.2□□□□□ -2.6
SNORA28-201ENST00000606769 A0A087WXM4 84 aa-1.21□□□□□ -2.6
SNORA28-201ENST00000606769 MMP24-AS1A0A0U1RRL7 71 aa-1.21□□□□□ -2.6
SNORA28-201ENST00000606769 H3BUT2 72 aa-1.21□□□□□ -2.6
SNORA28-201ENST00000606769 MT1EP04732 61 aa-1.21□□□□□ -2.6
SNORA28-201ENST00000606769 ST20Q9HBF5 79 aa-1.21□□□□□ -2.6
SNORA28-201ENST00000606769 HFM1A2PYH4 1435 aa-1.22□□□□□ -2.6
SNORA28-201ENST00000606769 MED14O60244 1454 aa-1.22□□□□□ -2.6
SNORA28-201ENST00000606769 TNP1P09430 55 aa-1.22□□□□□ -2.6
SNORA28-201ENST00000606769 CLPSL2Q6UWE3 100 aa-1.22□□□□□ -2.6
SNORA28-201ENST00000606769 CSMD1Q96PZ7 3565 aa-1.22□□□□□ -2.61
SNORA28-201ENST00000606769 NHSQ6T4R5 1651 aa-1.23□□□□□ -2.61
SNORA28-201ENST00000606769 LY75O60449 1722 aa-1.23□□□□□ -2.61
SNORA28-201ENST00000606769 RALGAPBQ86X10 1494 aa-1.23□□□□□ -2.61
SNORA28-201ENST00000606769 DCAF1Q9Y4B6 1507 aa-1.23□□□□□ -2.61
SNORA28-201ENST00000606769 MRPL33O75394 65 aaKnown RBP-1.23□□□□□ -2.61
SNORA28-201ENST00000606769 UBL5Q9BZL1 73 aa-1.23□□□□□ -2.61
SNORA28-201ENST00000606769 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.23□□□□□ -2.61
SNORA28-201ENST00000606769 ITPR1Q14643 2758 aa-1.23□□□□□ -2.61
SNORA28-201ENST00000606769 BVES-AS1Q5T3Y7 98 aa-1.24□□□□□ -2.61
SNORA28-201ENST00000606769 ENHOQ6UWT2 76 aa-1.24□□□□□ -2.61
SNORA28-201ENST00000606769 LRRIQ1Q96JM4 1722 aa-1.24□□□□□ -2.61
SNORA28-201ENST00000606769 COL6A5A8TX70 2615 aa-1.24□□□□□ -2.61
SNORA28-201ENST00000606769 ERVK-7P63135 1459 aa-1.24□□□□□ -2.61
SNORA28-201ENST00000606769 ASXL1Q8IXJ9 1541 aa-1.25□□□□□ -2.61
SNORA28-201ENST00000606769 ADIRFQ15847 76 aa-1.25□□□□□ -2.61
SNORA28-201ENST00000606769 MINOS1Q5TGZ0 78 aa-1.25□□□□□ -2.61
SNORA28-201ENST00000606769 CFAP74Q9C0B2 1584 aa-1.25□□□□□ -2.61
SNORA28-201ENST00000606769 ETDCA0A1B0GVM5 59 aa-1.26□□□□□ -2.61
SNORA28-201ENST00000606769 MT1LQ93083 61 aa-1.26□□□□□ -2.61
SNORA28-201ENST00000606769 ABCC1P33527 1531 aa-1.26□□□□□ -2.61
SNORA28-201ENST00000606769 LMTK2Q8IWU2 1503 aa-1.26□□□□□ -2.61
SNORA28-201ENST00000606769 MAST1Q9Y2H9 1570 aa-1.26□□□□□ -2.61
SNORA28-201ENST00000606769 SPTAN1Q13813 2472 aaKnown RBP-1.27□□□□□ -2.61
SNORA28-201ENST00000606769 LRBAP50851 2863 aa-1.27□□□□□ -2.61
SNORA28-201ENST00000606769 MYO9AB2RTY4 2548 aa-1.27□□□□□ -2.61
SNORA28-201ENST00000606769 DIP2AQ14689 1571 aa-1.28□□□□□ -2.61
SNORA28-201ENST00000606769 SFTA3P0C7M3 94 aa-1.28□□□□□ -2.61
SNORA28-201ENST00000606769 GNG2P59768 71 aa-1.29□□□□□ -2.62
SNORA28-201ENST00000606769 C18orf32Q8TCD1 76 aa-1.29□□□□□ -2.62
SNORA28-201ENST00000606769 S100A13Q99584 98 aa-1.29□□□□□ -2.62
SNORA28-201ENST00000606769 C6orf48Q9UBA6 75 aa-1.29□□□□□ -2.62
SNORA28-201ENST00000606769 DNAH10Q8IVF4 4471 aa-1.29□□□□□ -2.62
SNORA28-201ENST00000606769 EYSQ5T1H1 3165 aa-1.29□□□□□ -2.62
SNORA28-201ENST00000606769 TRRAPQ9Y4A5 3859 aa-1.29□□□□□ -2.62
SNORA28-201ENST00000606769 ADGRG4Q8IZF6 3080 aa-1.29□□□□□ -2.62
SNORA28-201ENST00000606769 MGAQ8IWI9 3026 aa-1.3□□□□□ -2.62
SNORA28-201ENST00000606769 MYO5CQ9NQX4 1742 aa-1.3□□□□□ -2.62
SNORA28-201ENST00000606769 CEP295Q9C0D2 2601 aa-1.3□□□□□ -2.62
SNORA28-201ENST00000606769 DNAH5Q8TE73 4624 aa-1.3□□□□□ -2.62
SNORA28-201ENST00000606769 MT1HL1P0DM35 61 aa-1.31□□□□□ -2.62
SNORA28-201ENST00000606769 MT1GP13640 62 aa-1.31□□□□□ -2.62
SNORA28-201ENST00000606769 ABCA8O94911 1581 aa-1.31□□□□□ -2.62
SNORA28-201ENST00000606769 ABCC6O95255 1503 aa-1.31□□□□□ -2.62
SNORA28-201ENST00000606769 H3BUA1 57 aa-1.32□□□□□ -2.62
SNORA28-201ENST00000606769 FCER1GP30273 86 aa-1.32□□□□□ -2.62
SNORA28-201ENST00000606769 C3P01024 1663 aa-1.32□□□□□ -2.62
SNORA28-201ENST00000606769 CDC42BPGQ6DT37 1551 aa-1.33□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms