RNA–Protein interactions for RNA: ENST00000606102.1

HMGN2P28-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 28, humanhuman

BASIC

Gene HMGN2P28, Length 262 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P28-201ENST00000606102 COX8AP10176 69 aa1.53□□□□□ -2.16
HMGN2P28-201ENST00000606102 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
HMGN2P28-201ENST00000606102 DEFB108BQ8NET1 73 aa1.53□□□□□ -2.16
HMGN2P28-201ENST00000606102 H3BVH4 76 aa1.52□□□□□ -2.17
HMGN2P28-201ENST00000606102 IFI6P09912 130 aa1.52□□□□□ -2.17
HMGN2P28-201ENST00000606102 SSBP3-AS1Q7Z2R9 100 aa1.52□□□□□ -2.17
HMGN2P28-201ENST00000606102 GAFA1Q96PS6 74 aa1.52□□□□□ -2.17
HMGN2P28-201ENST00000606102 GNG13Q9P2W3 67 aa1.52□□□□□ -2.17
HMGN2P28-201ENST00000606102 HRNRQ86YZ3 2850 aaPredicted RBP1.52□□□□□ -2.17
HMGN2P28-201ENST00000606102 SVEP1Q4LDE5 3571 aa1.52□□□□□ -2.17
HMGN2P28-201ENST00000606102 LCE6AA0A183 80 aa1.51□□□□□ -2.17
HMGN2P28-201ENST00000606102 H3BUX3 64 aa1.51□□□□□ -2.17
HMGN2P28-201ENST00000606102 SPINK7P58062 85 aa1.51□□□□□ -2.17
HMGN2P28-201ENST00000606102 ATXN8Q156A1 80 aa1.51□□□□□ -2.17
HMGN2P28-201ENST00000606102 ANK2Q01484 3957 aa1.5□□□□□ -2.17
HMGN2P28-201ENST00000606102 TRAV21A0A0B4J279 112 aa1.5□□□□□ -2.17
HMGN2P28-201ENST00000606102 WFDC9Q8NEX5 89 aa1.5□□□□□ -2.17
HMGN2P28-201ENST00000606102 VWFP04275 2813 aa1.49□□□□□ -2.17
HMGN2P28-201ENST00000606102 WNK2Q9Y3S1 2297 aa1.49□□□□□ -2.17
HMGN2P28-201ENST00000606102 PIGYQ3MUY2 71 aa1.49□□□□□ -2.17
HMGN2P28-201ENST00000606102 TENM3Q9P273 2699 aa1.49□□□□□ -2.17
HMGN2P28-201ENST00000606102 PLCE1Q9P212 2302 aa1.49□□□□□ -2.17
HMGN2P28-201ENST00000606102 SORL1Q92673 2214 aa1.48□□□□□ -2.17
HMGN2P28-201ENST00000606102 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
HMGN2P28-201ENST00000606102 H3BSH0 61 aa1.48□□□□□ -2.17
HMGN2P28-201ENST00000606102 M0R1W7 72 aa1.48□□□□□ -2.17
HMGN2P28-201ENST00000606102 RPS27LQ71UM5 84 aaKnown RBP1.48□□□□□ -2.17
HMGN2P28-201ENST00000606102 USMG5Q96IX5 58 aa1.48□□□□□ -2.17
HMGN2P28-201ENST00000606102 HILPDAQ9Y5L2 63 aa1.48□□□□□ -2.17
HMGN2P28-201ENST00000606102 TRRAPQ9Y4A5 3859 aa1.48□□□□□ -2.17
HMGN2P28-201ENST00000606102 CNFNQ9BYD5 112 aa1.47□□□□□ -2.17
HMGN2P28-201ENST00000606102 STAB2Q8WWQ8 2551 aa1.46□□□□□ -2.18
HMGN2P28-201ENST00000606102 CPSF4LA6NMK7 179 aaKnown RBP1.46□□□□□ -2.18
HMGN2P28-201ENST00000606102 KRTAP12-4P60329 112 aa1.46□□□□□ -2.18
HMGN2P28-201ENST00000606102 MINOS1Q5TGZ0 78 aa1.46□□□□□ -2.18
HMGN2P28-201ENST00000606102 KAAG1Q9UBP8 84 aa1.46□□□□□ -2.18
HMGN2P28-201ENST00000606102 ANK3Q12955 4377 aaKnown RBP1.46□□□□□ -2.18
HMGN2P28-201ENST00000606102 COX7BP24311 80 aa1.45□□□□□ -2.18
HMGN2P28-201ENST00000606102 KRTAP12-3P60328 96 aa1.45□□□□□ -2.18
HMGN2P28-201ENST00000606102 COX6A2Q02221 97 aa1.45□□□□□ -2.18
HMGN2P28-201ENST00000606102 PRB3Q04118 309 aaPredicted RBP1.45□□□□□ -2.18
HMGN2P28-201ENST00000606102 NREPQ16612 68 aa1.45□□□□□ -2.18
HMGN2P28-201ENST00000606102 C10orf95Q9H7T3 257 aa1.45□□□□□ -2.18
HMGN2P28-201ENST00000606102 TENM2Q9NT68 2774 aa1.45□□□□□ -2.18
HMGN2P28-201ENST00000606102 SFTA3P0C7M3 94 aa1.44□□□□□ -2.18
HMGN2P28-201ENST00000606102 TP53AIP1Q9HCN2 124 aa1.44□□□□□ -2.18
HMGN2P28-201ENST00000606102 CRIPTQ9P021 101 aa1.44□□□□□ -2.18
HMGN2P28-201ENST00000606102 DEFB136Q30KP8 78 aa1.43□□□□□ -2.18
HMGN2P28-201ENST00000606102 C3orf79P0CE67 100 aa1.42□□□□□ -2.18
HMGN2P28-201ENST00000606102 COL7A1Q02388 2944 aa1.42□□□□□ -2.18
HMGN2P28-201ENST00000606102 KMT2CQ8NEZ4 4911 aaKnown RBP1.42□□□□□ -2.18
HMGN2P28-201ENST00000606102 LINC00959A0A1B0GUT2 108 aa1.41□□□□□ -2.18
HMGN2P28-201ENST00000606102 FXYD6-FXYD2A0A087WZ82 144 aa1.4□□□□□ -2.19
HMGN2P28-201ENST00000606102 SNRPGP15A8MWD9 76 aa1.4□□□□□ -2.19
HMGN2P28-201ENST00000606102 I3L3M4 83 aa1.4□□□□□ -2.19
HMGN2P28-201ENST00000606102 TOMM5Q8N4H5 51 aa1.4□□□□□ -2.19
HMGN2P28-201ENST00000606102 UBL5Q9BZL1 73 aa1.4□□□□□ -2.19
HMGN2P28-201ENST00000606102 FXYD6Q9H0Q3 95 aa1.4□□□□□ -2.19
HMGN2P28-201ENST00000606102 ABRACLQ9P1F3 81 aa1.4□□□□□ -2.19
HMGN2P28-201ENST00000606102 PRKDCP78527 4128 aaKnown RBP1.39□□□□□ -2.19
HMGN2P28-201ENST00000606102 RYR3Q15413 4870 aa1.39□□□□□ -2.19
HMGN2P28-201ENST00000606102 RPS27P42677 84 aaKnown RBP1.39□□□□□ -2.19
HMGN2P28-201ENST00000606102 DEFB135Q30KP9 77 aa1.39□□□□□ -2.19
HMGN2P28-201ENST00000606102 H3BUA1 57 aa1.38□□□□□ -2.19
HMGN2P28-201ENST00000606102 LEAP2Q969E1 77 aa1.38□□□□□ -2.19
HMGN2P28-201ENST00000606102 BIRC6Q9NR09 4857 aa1.38□□□□□ -2.19
HMGN2P28-201ENST00000606102 DEFB131BA0A096LNP1 70 aa1.37□□□□□ -2.19
HMGN2P28-201ENST00000606102 SPART-AS1P0CW21 52 aa1.37□□□□□ -2.19
HMGN2P28-201ENST00000606102 HTN3P15516 51 aa1.37□□□□□ -2.19
HMGN2P28-201ENST00000606102 SNRPGP62308 76 aaKnown RBP1.37□□□□□ -2.19
HMGN2P28-201ENST00000606102 DEFB114Q30KQ6 69 aa1.37□□□□□ -2.19
HMGN2P28-201ENST00000606102 Q8IZM0 81 aa1.37□□□□□ -2.19
HMGN2P28-201ENST00000606102 EPPK1P58107 5090 aaKnown RBP1.37□□□□□ -2.19
HMGN2P28-201ENST00000606102 NDUFA4O00483 81 aa1.36□□□□□ -2.19
HMGN2P28-201ENST00000606102 DEFB4AO15263 64 aa1.36□□□□□ -2.19
HMGN2P28-201ENST00000606102 FAM103A1Q9BTL3 118 aaKnown RBP1.36□□□□□ -2.19
HMGN2P28-201ENST00000606102 CMC2Q9NRP2 79 aa1.36□□□□□ -2.19
HMGN2P28-201ENST00000606102 PRO0255Q9UI72 69 aa1.36□□□□□ -2.19
HMGN2P28-201ENST00000606102 CMYA5Q8N3K9 4069 aa1.36□□□□□ -2.19
HMGN2P28-201ENST00000606102 I3L2K1 104 aa1.35□□□□□ -2.19
HMGN2P28-201ENST00000606102 APELAP0DMC3 54 aa1.35□□□□□ -2.19
HMGN2P28-201ENST00000606102 SERF2P84101 59 aa1.35□□□□□ -2.19
HMGN2P28-201ENST00000606102 COX6B2Q6YFQ2 88 aa1.35□□□□□ -2.19
HMGN2P28-201ENST00000606102 TTTY10Q9BZA0 68 aa1.35□□□□□ -2.19
HMGN2P28-201ENST00000606102 CSMD3Q7Z407 3707 aa1.35□□□□□ -2.19
HMGN2P28-201ENST00000606102 SRRM2Q9UQ35 2752 aaKnown RBP1.34□□□□□ -2.19
HMGN2P28-201ENST00000606102 TNCP24821 2201 aa1.34□□□□□ -2.19
HMGN2P28-201ENST00000606102 LINC01549A6NIU2 74 aa1.34□□□□□ -2.19
HMGN2P28-201ENST00000606102 PRH1P02810 166 aa1.34□□□□□ -2.19
HMGN2P28-201ENST00000606102 Q5VSD8 79 aa1.34□□□□□ -2.19
HMGN2P28-201ENST00000606102 DEFB104AQ8WTQ1 72 aa1.34□□□□□ -2.19
HMGN2P28-201ENST00000606102 NMES1Q9C002 83 aa1.34□□□□□ -2.19
HMGN2P28-201ENST00000606102 APLNQ9ULZ1 77 aa1.34□□□□□ -2.19
HMGN2P28-201ENST00000606102 A0A0D9SG42 100 aa1.33□□□□□ -2.2
HMGN2P28-201ENST00000606102 NDUFA3O95167 84 aa1.33□□□□□ -2.2
HMGN2P28-201ENST00000606102 SMR3BP02814 79 aaPredicted RBP1.33□□□□□ -2.2
HMGN2P28-201ENST00000606102 HTN1P15515 57 aa1.33□□□□□ -2.2
HMGN2P28-201ENST00000606102 DEFB131AP59861 70 aa1.33□□□□□ -2.2
HMGN2P28-201ENST00000606102 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
HMGN2P28-201ENST00000606102 ENHOQ6UWT2 76 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms