RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 KRTAP11-1Q8IUC1 163 aa9.4□□□□□ -0.9
PPFIA3-206ENST00000602655 DNAH1Q9P2D7 4330 aa9.4□□□□□ -0.9
PPFIA3-206ENST00000602655 SPRR1AP35321 89 aa9.4□□□□□ -0.9
PPFIA3-206ENST00000602655 A0A087WTM6 91 aa9.4□□□□□ -0.91
PPFIA3-206ENST00000602655 IGLV5-52A0A0A0MRZ9 124 aa9.39□□□□□ -0.91
PPFIA3-206ENST00000602655 MMP24-AS1A0A0U1RRL7 71 aa9.38□□□□□ -0.91
PPFIA3-206ENST00000602655 A0A1B0GU69 56 aa9.38□□□□□ -0.91
PPFIA3-206ENST00000602655 RTL8CO15255 209 aa9.38□□□□□ -0.91
PPFIA3-206ENST00000602655 PLA2G1BP04054 148 aaKnown RBP9.37□□□□□ -0.91
PPFIA3-206ENST00000602655 ANAPC11Q9NYG5 84 aa9.37□□□□□ -0.91
PPFIA3-206ENST00000602655 C14orf177Q52M58 125 aa9.36□□□□□ -0.91
PPFIA3-206ENST00000602655 TP53AIP1Q9HCN2 124 aa9.36□□□□□ -0.91
PPFIA3-206ENST00000602655 PLAC8Q9NZF1 115 aa9.35□□□□□ -0.91
PPFIA3-206ENST00000602655 LINC00472Q9H8W2 130 aa9.35□□□□□ -0.91
PPFIA3-206ENST00000602655 ZNF706Q9Y5V0 76 aaPredicted RBP9.35□□□□□ -0.91
PPFIA3-206ENST00000602655 HYDINQ4G0P3 5121 aa9.34□□□□□ -0.91
PPFIA3-206ENST00000602655 VPS13DQ5THJ4 4388 aa9.34□□□□□ -0.91
PPFIA3-206ENST00000602655 IGLV8-61A0A075B6I0 122 aa9.33□□□□□ -0.92
PPFIA3-206ENST00000602655 IGLV9-49A0A0B4J1Y8 123 aa9.33□□□□□ -0.92
PPFIA3-206ENST00000602655 Q6ZRN7 208 aaPredicted RBP9.33□□□□□ -0.92
PPFIA3-206ENST00000602655 KRTAP10-2P60368 255 aa9.32□□□□□ -0.92
PPFIA3-206ENST00000602655 MIR22HGQ0VDD5 57 aa9.3□□□□□ -0.92
PPFIA3-206ENST00000602655 PLA2G2DQ9UNK4 145 aa9.29□□□□□ -0.92
PPFIA3-206ENST00000602655 DNAH2Q9P225 4427 aa9.29□□□□□ -0.92
PPFIA3-206ENST00000602655 ACYP2P14621 99 aa9.29□□□□□ -0.92
PPFIA3-206ENST00000602655 TLX1NBP0CAT3 122 aa9.28□□□□□ -0.92
PPFIA3-206ENST00000602655 C8orf17Q9NRJ1 99 aa9.28□□□□□ -0.92
PPFIA3-206ENST00000602655 SPINK6Q6UWN8 80 aa9.27□□□□□ -0.93
PPFIA3-206ENST00000602655 DNAH11Q96DT5 4516 aa9.27□□□□□ -0.93
PPFIA3-206ENST00000602655 FLG2Q5D862 2391 aaPredicted RBP9.26□□□□□ -0.93
PPFIA3-206ENST00000602655 Q6ZR54 194 aa9.25□□□□□ -0.93
PPFIA3-206ENST00000602655 UQCR11O14957 56 aa9.24□□□□□ -0.93
PPFIA3-206ENST00000602655 SMR3BP02814 79 aaPredicted RBP9.22□□□□□ -0.93
PPFIA3-206ENST00000602655 MRPL34Q9BQ48 92 aaKnown RBP9.21□□□□□ -0.93
PPFIA3-206ENST00000602655 DNAH6Q9C0G6 4158 aa9.2□□□□□ -0.94
PPFIA3-206ENST00000602655 PSORS1C2Q9UIG4 136 aa9.19□□□□□ -0.94
PPFIA3-206ENST00000602655 FRAS1Q86XX4 4008 aa9.18□□□□□ -0.94
PPFIA3-206ENST00000602655 CIRBP-AS1Q8TBR5 109 aa9.15□□□□□ -0.94
PPFIA3-206ENST00000602655 A0A1B0GVX0 72 aa9.15□□□□□ -0.95
PPFIA3-206ENST00000602655 SPATA8Q6RVD6 105 aa9.15□□□□□ -0.95
PPFIA3-206ENST00000602655 A0A087X002 238 aa9.14□□□□□ -0.95
PPFIA3-206ENST00000602655 NOTCH2NLQ7Z3S9 236 aa9.14□□□□□ -0.95
PPFIA3-206ENST00000602655 KMT2CQ8NEZ4 4911 aaKnown RBP9.14□□□□□ -0.95
PPFIA3-206ENST00000602655 SPACA4Q8TDM5 124 aa9.14□□□□□ -0.95
PPFIA3-206ENST00000602655 KRTAP10-1P60331 282 aa9.14□□□□□ -0.95
PPFIA3-206ENST00000602655 SPINK1P00995 79 aa9.11□□□□□ -0.95
PPFIA3-206ENST00000602655 Q5W150 140 aa9.1□□□□□ -0.95
PPFIA3-206ENST00000602655 ASB16-AS1Q495Z4 193 aa9.09□□□□□ -0.95
PPFIA3-206ENST00000602655 DYNC2H1Q8NCM8 4307 aaKnown RBP9.08□□□□□ -0.96
PPFIA3-206ENST00000602655 DMBT1Q9UGM3 2413 aaPredicted RBP9.06□□□□□ -0.96
PPFIA3-206ENST00000602655 KRTAP21-3Q3LHN1 58 aa9.05□□□□□ -0.96
PPFIA3-206ENST00000602655 PKHD1P08F94 4074 aa9.05□□□□□ -0.96
PPFIA3-206ENST00000602655 DNAH17Q9UFH2 4485 aa9.05□□□□□ -0.96
PPFIA3-206ENST00000602655 HECTD4Q9Y4D8 3996 aa9.05□□□□□ -0.96
PPFIA3-206ENST00000602655 CRIPTQ9P021 101 aa9.03□□□□□ -0.96
PPFIA3-206ENST00000602655 LRP1BQ9NZR2 4599 aa9.03□□□□□ -0.96
PPFIA3-206ENST00000602655 Q96NJ1 140 aa9.02□□□□□ -0.97
PPFIA3-206ENST00000602655 FAT1Q14517 4588 aa9.01□□□□□ -0.97
PPFIA3-206ENST00000602655 SACSQ9NZJ4 4579 aa9.01□□□□□ -0.97
PPFIA3-206ENST00000602655 SPRR1BP22528 89 aa9□□□□□ -0.97
PPFIA3-206ENST00000602655 ZNF861PO60384 105 aa8.98□□□□□ -0.97
PPFIA3-206ENST00000602655 ROMO1P60602 79 aa8.98□□□□□ -0.97
PPFIA3-206ENST00000602655 DNAH5Q8TE73 4624 aa8.97□□□□□ -0.97
PPFIA3-206ENST00000602655 DNAH8Q96JB1 4490 aa8.97□□□□□ -0.97
PPFIA3-206ENST00000602655 IGKV2D-30A0A075B6S6 120 aa8.97□□□□□ -0.97
PPFIA3-206ENST00000602655 IGKV2-30P06310 120 aa8.97□□□□□ -0.97
PPFIA3-206ENST00000602655 DMAC1Q96GE9 116 aa8.96□□□□□ -0.98
PPFIA3-206ENST00000602655 IGLV7-43P04211 117 aa8.94□□□□□ -0.98
PPFIA3-206ENST00000602655 KRTAP25-1Q3LHN0 102 aa8.88□□□□□ -0.99
PPFIA3-206ENST00000602655 SSBP3-AS1Q7Z2R9 100 aa8.88□□□□□ -0.99
PPFIA3-206ENST00000602655 DYNC1H1Q14204 4646 aaKnown RBP8.85□□□□□ -0.99
PPFIA3-206ENST00000602655 KRTAP13-1Q8IUC0 172 aa8.84□□□□□ -0.99
PPFIA3-206ENST00000602655 FAT2Q9NYQ8 4349 aa8.84□□□□□ -0.99
PPFIA3-206ENST00000602655 FAM229AH3BQW9 127 aa8.83□□□□□ -1
PPFIA3-206ENST00000602655 RYR3Q15413 4870 aa8.81□□□□□ -1
PPFIA3-206ENST00000602655 VPS13BQ7Z7G8 4022 aa8.8□□□□□ -1
PPFIA3-206ENST00000602655 SPINT4Q6UDR6 99 aa8.79□□□□□ -1
PPFIA3-206ENST00000602655 A8MUU9 505 aa8.78□□□□□ -1
PPFIA3-206ENST00000602655 RYR2Q92736 4967 aa8.78□□□□□ -1
PPFIA3-206ENST00000602655 Q8N1X5 172 aa8.77□□□□□ -1.01
PPFIA3-206ENST00000602655 KIAA1109Q2LD37 5005 aa8.76□□□□□ -1.01
PPFIA3-206ENST00000602655 LINC00304Q8N9R0 145 aa8.75□□□□□ -1.01
PPFIA3-206ENST00000602655 KRTAP13-3Q3SY46 172 aa8.74□□□□□ -1.01
PPFIA3-206ENST00000602655 PKD1P98161 4303 aa8.73□□□□□ -1.01
PPFIA3-206ENST00000602655 K7ERS5 55 aa8.72□□□□□ -1.01
PPFIA3-206ENST00000602655 TYMSOSQ8TAI1 123 aa8.72□□□□□ -1.01
PPFIA3-206ENST00000602655 Q6ZSA8 131 aa8.7□□□□□ -1.02
PPFIA3-206ENST00000602655 KRTAP13-2Q52LG2 175 aa8.7□□□□□ -1.02
PPFIA3-206ENST00000602655 P0C880 135 aa8.69□□□□□ -1.02
PPFIA3-206ENST00000602655 ALMS1Q8TCU4 4167 aa8.68□□□□□ -1.02
PPFIA3-206ENST00000602655 APOBP04114 4563 aaKnown RBP8.67□□□□□ -1.02
PPFIA3-206ENST00000602655 H0YAA0 97 aa8.64□□□□□ -1.03
PPFIA3-206ENST00000602655 A0A1B0GU33 70 aa8.64□□□□□ -1.03
PPFIA3-206ENST00000602655 LRP1Q07954 4544 aaKnown RBP8.64□□□□□ -1.03
PPFIA3-206ENST00000602655 NDUFAF8A1L188 74 aa8.62□□□□□ -1.03
PPFIA3-206ENST00000602655 LINC00483Q53H64 154 aa8.62□□□□□ -1.03
PPFIA3-206ENST00000602655 EPPK1P58107 5090 aaKnown RBP8.6□□□□□ -1.03
PPFIA3-206ENST00000602655 C9orf92A6NGG3 77 aa8.59□□□□□ -1.04
PPFIA3-206ENST00000602655 A0A1B0GVY2 172 aa8.58□□□□□ -1.04
PPFIA3-206ENST00000602655 KRTAP1-4P0C5Y4 121 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms