RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 ACYP1P07311 99 aa6.47□□□□□ -1.37
CHMP2A-207ENST00000600804 NREPQ16612 68 aa6.47□□□□□ -1.37
CHMP2A-207ENST00000600804 H3BS24 57 aa6.46□□□□□ -1.38
CHMP2A-207ENST00000600804 LINC00846Q9NV44 126 aa6.45□□□□□ -1.38
CHMP2A-207ENST00000600804 KRTAP13-3Q3SY46 172 aa6.44□□□□□ -1.38
CHMP2A-207ENST00000600804 CDIP1Q9H305 208 aa6.44□□□□□ -1.38
CHMP2A-207ENST00000600804 IGKV4-1P06312 121 aa6.43□□□□□ -1.38
CHMP2A-207ENST00000600804 Q6ZVQ6 151 aa6.43□□□□□ -1.38
CHMP2A-207ENST00000600804 UBL5Q9BZL1 73 aa6.43□□□□□ -1.38
CHMP2A-207ENST00000600804 J3QR89 54 aa6.42□□□□□ -1.38
CHMP2A-207ENST00000600804 SIGMAR1Q99720 223 aa6.4□□□□□ -1.38
CHMP2A-207ENST00000600804 A8MWP4 228 aa6.39□□□□□ -1.39
CHMP2A-207ENST00000600804 DEFB116Q30KQ4 102 aa6.39□□□□□ -1.39
CHMP2A-207ENST00000600804 BPY2O14599 106 aa6.38□□□□□ -1.39
CHMP2A-207ENST00000600804 LCE2BO14633 110 aa6.38□□□□□ -1.39
CHMP2A-207ENST00000600804 NDUFB1O75438 58 aa6.38□□□□□ -1.39
CHMP2A-207ENST00000600804 A0A1B0GVX0 72 aa6.37□□□□□ -1.39
CHMP2A-207ENST00000600804 C8orf87E5RJ46 101 aa6.37□□□□□ -1.39
CHMP2A-207ENST00000600804 DSCR10P59022 87 aa6.37□□□□□ -1.39
CHMP2A-207ENST00000600804 CXCL6P80162 114 aa6.36□□□□□ -1.39
CHMP2A-207ENST00000600804 PRR15Q8IV56 129 aa6.36□□□□□ -1.39
CHMP2A-207ENST00000600804 IGKV3D-7A0A0C4DH55 119 aa6.35□□□□□ -1.39
CHMP2A-207ENST00000600804 XP32Q5T750 250 aa6.35□□□□□ -1.39
CHMP2A-207ENST00000600804 FSIP2Q5CZC0 6907 aa6.34□□□□□ -1.39
CHMP2A-207ENST00000600804 LINC00313P59037 77 aa6.34□□□□□ -1.39
CHMP2A-207ENST00000600804 IGHV6-1A0A0B4J1U7 121 aa6.33□□□□□ -1.4
CHMP2A-207ENST00000600804 C9orf92A6NGG3 77 aa6.33□□□□□ -1.4
CHMP2A-207ENST00000600804 K7ERU9 68 aa6.33□□□□□ -1.4
CHMP2A-207ENST00000600804 ATP5EP2Q5VTU8 51 aa6.33□□□□□ -1.4
CHMP2A-207ENST00000600804 LINC00643Q86TS7 51 aa6.32□□□□□ -1.4
CHMP2A-207ENST00000600804 K7EQZ3 153 aa6.31□□□□□ -1.4
CHMP2A-207ENST00000600804 KRTAP16-1A8MUX0 517 aa6.3□□□□□ -1.4
CHMP2A-207ENST00000600804 Q75L30 129 aa6.3□□□□□ -1.4
CHMP2A-207ENST00000600804 NOTCH2NLQ7Z3S9 236 aa6.3□□□□□ -1.4
CHMP2A-207ENST00000600804 C20orf166-AS1Q96NR2 134 aa6.3□□□□□ -1.4
CHMP2A-207ENST00000600804 C8orf17Q9NRJ1 99 aa6.3□□□□□ -1.4
CHMP2A-207ENST00000600804 A8MUU9 505 aa6.28□□□□□ -1.4
CHMP2A-207ENST00000600804 KRTAP4-1Q9BYQ7 146 aa6.28□□□□□ -1.4
CHMP2A-207ENST00000600804 MMP24-AS1A0A0U1RRL7 71 aa6.27□□□□□ -1.41
CHMP2A-207ENST00000600804 RPL37P61927 97 aaKnown RBP6.27□□□□□ -1.41
CHMP2A-207ENST00000600804 SEC61BP60468 96 aaKnown RBP6.25□□□□□ -1.41
CHMP2A-207ENST00000600804 Q8N9L7 120 aa6.25□□□□□ -1.41
CHMP2A-207ENST00000600804 Q8N9P0 234 aaPredicted RBP6.25□□□□□ -1.41
CHMP2A-207ENST00000600804 TMEM254Q8TBM7 123 aa6.25□□□□□ -1.41
CHMP2A-207ENST00000600804 CRCT1Q9UGL9 99 aa6.25□□□□□ -1.41
CHMP2A-207ENST00000600804 hDV103S1A0JD37 113 aa6.24□□□□□ -1.41
CHMP2A-207ENST00000600804 HCG22E2RYF7 251 aa6.22□□□□□ -1.41
CHMP2A-207ENST00000600804 LCE2CQ5TA81 110 aa6.22□□□□□ -1.41
CHMP2A-207ENST00000600804 MRPL34Q9BQ48 92 aaKnown RBP6.22□□□□□ -1.41
CHMP2A-207ENST00000600804 CASC2Q6XLA1 102 aa6.2□□□□□ -1.42
CHMP2A-207ENST00000600804 ATP11AUNQ6ZP68 121 aa6.18□□□□□ -1.42
CHMP2A-207ENST00000600804 IMUPQ9GZP8 106 aa6.18□□□□□ -1.42
CHMP2A-207ENST00000600804 WFDC13Q8IUB5 93 aa6.17□□□□□ -1.42
CHMP2A-207ENST00000600804 HIST1H4AP62805 103 aaKnown RBP6.16□□□□□ -1.42
CHMP2A-207ENST00000600804 PCOTHQ58A44 107 aa6.16□□□□□ -1.42
CHMP2A-207ENST00000600804 ZCCHC13Q8WW36 166 aaKnown RBP6.14□□□□□ -1.43
CHMP2A-207ENST00000600804 KRTAP19-2Q3LHN2 52 aa6.13□□□□□ -1.43
CHMP2A-207ENST00000600804 TP53AIP1Q9HCN2 124 aa6.12□□□□□ -1.43
CHMP2A-207ENST00000600804 A0A087WVE0 104 aa6.11□□□□□ -1.43
CHMP2A-207ENST00000600804 MT-ATP8P03928 68 aa6.11□□□□□ -1.43
CHMP2A-207ENST00000600804 NDUFS5O43920 106 aa6.1□□□□□ -1.43
CHMP2A-207ENST00000600804 FLGP20930 4061 aaPredicted RBP6.08□□□□□ -1.44
CHMP2A-207ENST00000600804 MT1HP80294 61 aa6.07□□□□□ -1.44
CHMP2A-207ENST00000600804 Q5W150 140 aa6.05□□□□□ -1.44
CHMP2A-207ENST00000600804 UQCRQO14949 82 aa6.03□□□□□ -1.44
CHMP2A-207ENST00000600804 LORP23490 312 aaPredicted RBP6.03□□□□□ -1.44
CHMP2A-207ENST00000600804 OCR1Q9BZK8 76 aa6.02□□□□□ -1.45
CHMP2A-207ENST00000600804 SPINK7P58062 85 aa6□□□□□ -1.45
CHMP2A-207ENST00000600804 TRAV22A0A0B4J277 110 aa5.99□□□□□ -1.45
CHMP2A-207ENST00000600804 SCGB1A1P11684 91 aa5.99□□□□□ -1.45
CHMP2A-207ENST00000600804 FAM236AA0A1B0GUQ0 79 aa5.98□□□□□ -1.45
CHMP2A-207ENST00000600804 FAM236BA0A1B0GV22 79 aa5.98□□□□□ -1.45
CHMP2A-207ENST00000600804 KRTAP10-6P60371 365 aaPredicted RBP5.98□□□□□ -1.45
CHMP2A-207ENST00000600804 SMIM20Q8N5G0 67 aa5.98□□□□□ -1.45
CHMP2A-207ENST00000600804 ATOX1O00244 68 aa5.97□□□□□ -1.45
CHMP2A-207ENST00000600804 C7orf65Q6ZTY9 151 aa5.97□□□□□ -1.45
CHMP2A-207ENST00000600804 MPLKIPQ8TAP9 179 aa5.97□□□□□ -1.45
CHMP2A-207ENST00000600804 IGKV2-30P06310 120 aa5.96□□□□□ -1.46
CHMP2A-207ENST00000600804 HRES1P13985 223 aa5.96□□□□□ -1.46
CHMP2A-207ENST00000600804 C5orf47Q569G3 176 aa5.95□□□□□ -1.46
CHMP2A-207ENST00000600804 SSPOA2VEC9 5147 aa5.94□□□□□ -1.46
CHMP2A-207ENST00000600804 LOC101927531A0A1B0GV80 90 aa5.94□□□□□ -1.46
CHMP2A-207ENST00000600804 IGKV2D-30A0A075B6S6 120 aa5.93□□□□□ -1.46
CHMP2A-207ENST00000600804 H0Y9P7 68 aa5.93□□□□□ -1.46
CHMP2A-207ENST00000600804 TRAV7A0A075B6U4 112 aa5.92□□□□□ -1.46
CHMP2A-207ENST00000600804 H3BPC8 53 aa5.92□□□□□ -1.46
CHMP2A-207ENST00000600804 MP68P56378 58 aa5.91□□□□□ -1.46
CHMP2A-207ENST00000600804 CYP4F30PQ9H0H9 118 aa5.9□□□□□ -1.46
CHMP2A-207ENST00000600804 RBM12B-AS1Q9P1G2 102 aa5.9□□□□□ -1.46
CHMP2A-207ENST00000600804 USH2AO75445 5202 aa5.88□□□□□ -1.47
CHMP2A-207ENST00000600804 C1orf64Q8NEQ6 169 aa5.87□□□□□ -1.47
CHMP2A-207ENST00000600804 KRTAP9-7A8MTY7 169 aa5.86□□□□□ -1.47
CHMP2A-207ENST00000600804 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.86□□□□□ -1.47
CHMP2A-207ENST00000600804 SERP2Q8N6R1 65 aa5.86□□□□□ -1.47
CHMP2A-207ENST00000600804 LINC00208Q96KT6 92 aa5.86□□□□□ -1.47
CHMP2A-207ENST00000600804 COX6B2Q6YFQ2 88 aa5.84□□□□□ -1.47
CHMP2A-207ENST00000600804 M0R2T5 61 aa5.82□□□□□ -1.48
CHMP2A-207ENST00000600804 FAM236DA0A1B0GTK5 79 aa5.81□□□□□ -1.48
CHMP2A-207ENST00000600804 FAM236CP0DP71 79 aa5.81□□□□□ -1.48
CHMP2A-207ENST00000600804 C4orf26Q17RF5 130 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms