RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 DNAH10OSP0CZ25 163 aa9.1□□□□□ -0.95
CIRBP-228ENST00000590347 MIR22HGQ0VDD5 57 aa9.09□□□□□ -0.95
CIRBP-228ENST00000590347 MRPL34Q9BQ48 92 aaKnown RBP9.09□□□□□ -0.95
CIRBP-228ENST00000590347 DNAH3Q8TD57 4116 aa9.07□□□□□ -0.96
CIRBP-228ENST00000590347 A0A1B0GVX0 72 aa9.06□□□□□ -0.96
CIRBP-228ENST00000590347 ZNF706Q9Y5V0 76 aaPredicted RBP9.04□□□□□ -0.96
CIRBP-228ENST00000590347 ACYP2P14621 99 aa9.03□□□□□ -0.96
CIRBP-228ENST00000590347 C1orf134Q5TEV5 83 aa9.03□□□□□ -0.96
CIRBP-228ENST00000590347 PANO1I0J062 215 aa9.02□□□□□ -0.97
CIRBP-228ENST00000590347 ASB16-AS1Q495Z4 193 aa9.01□□□□□ -0.97
CIRBP-228ENST00000590347 KRTAP1-5Q9BYS1 174 aa9.01□□□□□ -0.97
CIRBP-228ENST00000590347 CRIPTQ9P021 101 aa9.01□□□□□ -0.97
CIRBP-228ENST00000590347 TGP01266 2768 aa9□□□□□ -0.97
CIRBP-228ENST00000590347 SPATA8Q6RVD6 105 aa9□□□□□ -0.97
CIRBP-228ENST00000590347 UBE2DNLQ8IWF7 75 aa9□□□□□ -0.97
CIRBP-228ENST00000590347 SPINK1P00995 79 aa8.98□□□□□ -0.97
CIRBP-228ENST00000590347 MEGF8Q7Z7M0 2845 aa8.98□□□□□ -0.97
CIRBP-228ENST00000590347 DNAH1Q9P2D7 4330 aa8.98□□□□□ -0.97
CIRBP-228ENST00000590347 UQCR11O14957 56 aa8.97□□□□□ -0.97
CIRBP-228ENST00000590347 DNAH7Q8WXX0 4024 aa8.97□□□□□ -0.97
CIRBP-228ENST00000590347 ALMS1Q8TCU4 4167 aa8.96□□□□□ -0.97
CIRBP-228ENST00000590347 FRAS1Q86XX4 4008 aa8.96□□□□□ -0.97
CIRBP-228ENST00000590347 SPRR1BP22528 89 aa8.96□□□□□ -0.97
CIRBP-228ENST00000590347 DNAH9Q9NYC9 4486 aa8.96□□□□□ -0.97
CIRBP-228ENST00000590347 DNHD1Q96M86 4753 aa8.96□□□□□ -0.98
CIRBP-228ENST00000590347 DMBT1Q9UGM3 2413 aaPredicted RBP8.89□□□□□ -0.99
CIRBP-228ENST00000590347 ZNF861PO60384 105 aa8.89□□□□□ -0.99
CIRBP-228ENST00000590347 PRKDCP78527 4128 aaKnown RBP8.88□□□□□ -0.99
CIRBP-228ENST00000590347 DMAC1Q96GE9 116 aa8.87□□□□□ -0.99
CIRBP-228ENST00000590347 APLNQ9ULZ1 77 aa8.86□□□□□ -0.99
CIRBP-228ENST00000590347 IGKV2D-30A0A075B6S6 120 aa8.86□□□□□ -0.99
CIRBP-228ENST00000590347 IGKV2-30P06310 120 aa8.86□□□□□ -0.99
CIRBP-228ENST00000590347 PLECQ15149 4684 aaKnown RBP8.86□□□□□ -0.99
CIRBP-228ENST00000590347 KRTAP13-3Q3SY46 172 aa8.85□□□□□ -0.99
CIRBP-228ENST00000590347 CIRBP-AS1Q8TBR5 109 aa8.85□□□□□ -0.99
CIRBP-228ENST00000590347 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.8□□□□□ -1
CIRBP-228ENST00000590347 STARD9Q9P2P6 4700 aa8.8□□□□□ -1
CIRBP-228ENST00000590347 WWC2-AS2Q96NR7 200 aa8.8□□□□□ -1
CIRBP-228ENST00000590347 FBN3Q75N90 2809 aa8.8□□□□□ -1
CIRBP-228ENST00000590347 KRTAP13-1Q8IUC0 172 aa8.78□□□□□ -1
CIRBP-228ENST00000590347 ROMO1P60602 79 aa8.78□□□□□ -1
CIRBP-228ENST00000590347 DNAH8Q96JB1 4490 aa8.75□□□□□ -1.01
CIRBP-228ENST00000590347 Q8N1X5 172 aa8.75□□□□□ -1.01
CIRBP-228ENST00000590347 NBDYA0A0U1RRE5 68 aa8.74□□□□□ -1.01
CIRBP-228ENST00000590347 C14orf177Q52M58 125 aa8.74□□□□□ -1.01
CIRBP-228ENST00000590347 KMT2AQ03164 3969 aa8.72□□□□□ -1.01
CIRBP-228ENST00000590347 KRTAP25-1Q3LHN0 102 aa8.71□□□□□ -1.01
CIRBP-228ENST00000590347 PSORS1C2Q9UIG4 136 aa8.7□□□□□ -1.02
CIRBP-228ENST00000590347 NUPR2A6NF83 97 aa8.69□□□□□ -1.02
CIRBP-228ENST00000590347 IGLV7-43P04211 117 aa8.69□□□□□ -1.02
CIRBP-228ENST00000590347 LINC00304Q8N9R0 145 aa8.68□□□□□ -1.02
CIRBP-228ENST00000590347 DNAH17Q9UFH2 4485 aa8.68□□□□□ -1.02
CIRBP-228ENST00000590347 P0C880 135 aa8.67□□□□□ -1.02
CIRBP-228ENST00000590347 A8MUU9 505 aa8.67□□□□□ -1.02
CIRBP-228ENST00000590347 IGLV5-52A0A0A0MRZ9 124 aa8.66□□□□□ -1.02
CIRBP-228ENST00000590347 H0YAA0 97 aa8.65□□□□□ -1.02
CIRBP-228ENST00000590347 LY6G6CO95867 125 aa8.65□□□□□ -1.02
CIRBP-228ENST00000590347 FAM229AH3BQW9 127 aa8.64□□□□□ -1.03
CIRBP-228ENST00000590347 SSBP3-AS1Q7Z2R9 100 aa8.63□□□□□ -1.03
CIRBP-228ENST00000590347 LINC00483Q53H64 154 aa8.63□□□□□ -1.03
CIRBP-228ENST00000590347 Q6ZRN7 208 aaPredicted RBP8.63□□□□□ -1.03
CIRBP-228ENST00000590347 Q6ZSA8 131 aa8.62□□□□□ -1.03
CIRBP-228ENST00000590347 TYMSOSQ8TAI1 123 aa8.61□□□□□ -1.03
CIRBP-228ENST00000590347 A0A087WTM6 91 aa8.57□□□□□ -1.04
CIRBP-228ENST00000590347 SPACA4Q8TDM5 124 aa8.56□□□□□ -1.04
CIRBP-228ENST00000590347 VPS13DQ5THJ4 4388 aa8.54□□□□□ -1.04
CIRBP-228ENST00000590347 DNAH2Q9P225 4427 aa8.54□□□□□ -1.04
CIRBP-228ENST00000590347 DYNC2H1Q8NCM8 4307 aaKnown RBP8.53□□□□□ -1.04
CIRBP-228ENST00000590347 KRTAP16-1A8MUX0 517 aa8.51□□□□□ -1.05
CIRBP-228ENST00000590347 SPINT4Q6UDR6 99 aa8.48□□□□□ -1.05
CIRBP-228ENST00000590347 A0A1B0GU33 70 aa8.46□□□□□ -1.06
CIRBP-228ENST00000590347 HECTD4Q9Y4D8 3996 aa8.45□□□□□ -1.06
CIRBP-228ENST00000590347 DNAH6Q9C0G6 4158 aa8.45□□□□□ -1.06
CIRBP-228ENST00000590347 NDUFAF8A1L188 74 aa8.43□□□□□ -1.06
CIRBP-228ENST00000590347 HYDINQ4G0P3 5121 aa8.43□□□□□ -1.06
CIRBP-228ENST00000590347 KRTAP10-2P60368 255 aa8.43□□□□□ -1.06
CIRBP-228ENST00000590347 KRTAP21-3Q3LHN1 58 aa8.39□□□□□ -1.07
CIRBP-228ENST00000590347 C10orf95Q9H7T3 257 aa8.39□□□□□ -1.07
CIRBP-228ENST00000590347 A0A0A0MQY5 61 aa8.38□□□□□ -1.07
CIRBP-228ENST00000590347 DNAH11Q96DT5 4516 aa8.37□□□□□ -1.07
CIRBP-228ENST00000590347 A0A0D9SG42 100 aa8.34□□□□□ -1.07
CIRBP-228ENST00000590347 H1FX-AS1Q4G0G2 97 aa8.34□□□□□ -1.07
CIRBP-228ENST00000590347 KRTAP13-2Q52LG2 175 aa8.34□□□□□ -1.07
CIRBP-228ENST00000590347 TPRXLQ17RH7 258 aa8.29□□□□□ -1.08
CIRBP-228ENST00000590347 KRTAP10-1P60331 282 aa8.27□□□□□ -1.08
CIRBP-228ENST00000590347 K7ERS5 55 aa8.27□□□□□ -1.09
CIRBP-228ENST00000590347 LRP1BQ9NZR2 4599 aa8.25□□□□□ -1.09
CIRBP-228ENST00000590347 DNAH5Q8TE73 4624 aa8.25□□□□□ -1.09
CIRBP-228ENST00000590347 COX6B2Q6YFQ2 88 aa8.24□□□□□ -1.09
CIRBP-228ENST00000590347 C9orf92A6NGG3 77 aa8.23□□□□□ -1.09
CIRBP-228ENST00000590347 KRTAP3-1Q9BYR8 98 aa8.22□□□□□ -1.09
CIRBP-228ENST00000590347 C20orf166-AS1Q96NR2 134 aa8.2□□□□□ -1.1
CIRBP-228ENST00000590347 PKHD1P08F94 4074 aa8.2□□□□□ -1.1
CIRBP-228ENST00000590347 SMR3BP02814 79 aaPredicted RBP8.16□□□□□ -1.1
CIRBP-228ENST00000590347 FAT2Q9NYQ8 4349 aa8.15□□□□□ -1.11
CIRBP-228ENST00000590347 PKD1P98161 4303 aa8.13□□□□□ -1.11
CIRBP-228ENST00000590347 KRTAP13-4Q3LI77 160 aa8.1□□□□□ -1.11
CIRBP-228ENST00000590347 VPS13BQ7Z7G8 4022 aa8.09□□□□□ -1.11
CIRBP-228ENST00000590347 KMT2CQ8NEZ4 4911 aaKnown RBP8.07□□□□□ -1.12
CIRBP-228ENST00000590347 KRTAP15-1Q3LI76 137 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms