RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 KRTAP13-3Q3SY46 172 aa6.02□□□□□ -1.45
ZNF540-205ENST00000587220 Q6ZVQ6 151 aa6.02□□□□□ -1.45
ZNF540-205ENST00000587220 Q8N377 158 aa6.01□□□□□ -1.45
ZNF540-205ENST00000587220 ST20-AS1Q8NBB2 130 aa6.01□□□□□ -1.45
ZNF540-205ENST00000587220 DHRS4-AS1Q9P1J3 65 aa6□□□□□ -1.45
ZNF540-205ENST00000587220 FAT4Q6V0I7 4981 aa6□□□□□ -1.45
ZNF540-205ENST00000587220 MUC17Q685J3 4493 aa5.97□□□□□ -1.45
ZNF540-205ENST00000587220 SEC61BP60468 96 aaKnown RBP5.97□□□□□ -1.45
ZNF540-205ENST00000587220 KLKP1Q107X0 134 aa5.97□□□□□ -1.45
ZNF540-205ENST00000587220 IGLV5-48A0A075B6I7 105 aa5.96□□□□□ -1.46
ZNF540-205ENST00000587220 NDUFC1O43677 76 aa5.96□□□□□ -1.46
ZNF540-205ENST00000587220 ASB16-AS1Q495Z4 193 aa5.96□□□□□ -1.46
ZNF540-205ENST00000587220 ATP5EP56381 51 aaPredicted RBP5.95□□□□□ -1.46
ZNF540-205ENST00000587220 LCE2AQ5TA79 106 aaPredicted RBP5.95□□□□□ -1.46
ZNF540-205ENST00000587220 HRCT1Q6UXD1 115 aa5.95□□□□□ -1.46
ZNF540-205ENST00000587220 DEFB105AQ8NG35 78 aa5.95□□□□□ -1.46
ZNF540-205ENST00000587220 LIMD2Q9BT23 127 aa5.95□□□□□ -1.46
ZNF540-205ENST00000587220 SPRR1BP22528 89 aa5.94□□□□□ -1.46
ZNF540-205ENST00000587220 CYSTM1Q9H1C7 97 aa5.92□□□□□ -1.46
ZNF540-205ENST00000587220 FAM236DA0A1B0GTK5 79 aa5.9□□□□□ -1.46
ZNF540-205ENST00000587220 FAM236CP0DP71 79 aa5.9□□□□□ -1.46
ZNF540-205ENST00000587220 NREPQ16612 68 aa5.9□□□□□ -1.46
ZNF540-205ENST00000587220 XP32Q5T750 250 aa5.9□□□□□ -1.46
ZNF540-205ENST00000587220 C20orf197Q8N268 126 aa5.9□□□□□ -1.46
ZNF540-205ENST00000587220 KRTAP9-2Q9BYQ4 174 aa5.9□□□□□ -1.46
ZNF540-205ENST00000587220 H7BZZ5 65 aa5.89□□□□□ -1.47
ZNF540-205ENST00000587220 SERP1Q9Y6X1 66 aa5.89□□□□□ -1.47
ZNF540-205ENST00000587220 IGKV4-1P06312 121 aa5.88□□□□□ -1.47
ZNF540-205ENST00000587220 CD164Q04900 197 aa5.88□□□□□ -1.47
ZNF540-205ENST00000587220 BPY2O14599 106 aa5.87□□□□□ -1.47
ZNF540-205ENST00000587220 C9orf92A6NGG3 77 aa5.86□□□□□ -1.47
ZNF540-205ENST00000587220 C5orf47Q569G3 176 aa5.85□□□□□ -1.47
ZNF540-205ENST00000587220 KRTAP4-1Q9BYQ7 146 aa5.85□□□□□ -1.47
ZNF540-205ENST00000587220 SMIM29Q86T20 159 aa5.84□□□□□ -1.47
ZNF540-205ENST00000587220 OCR1Q9BZK8 76 aa5.84□□□□□ -1.47
ZNF540-205ENST00000587220 IGLV8-61A0A075B6I0 122 aa5.83□□□□□ -1.48
ZNF540-205ENST00000587220 F8WEM9 126 aa5.83□□□□□ -1.48
ZNF540-205ENST00000587220 TMEM254Q8TBM7 123 aa5.83□□□□□ -1.48
ZNF540-205ENST00000587220 A0A1W2PNM2 257 aa5.82□□□□□ -1.48
ZNF540-205ENST00000587220 A0A0G2JQZ4 141 aa5.81□□□□□ -1.48
ZNF540-205ENST00000587220 PCOTHQ58A44 107 aa5.81□□□□□ -1.48
ZNF540-205ENST00000587220 Q5XG85 94 aa5.8□□□□□ -1.48
ZNF540-205ENST00000587220 SMIM26A0A096LP01 95 aa5.79□□□□□ -1.48
ZNF540-205ENST00000587220 C1orf195Q5TG92 126 aa5.79□□□□□ -1.48
ZNF540-205ENST00000587220 SNURFQ9Y675 71 aa5.77□□□□□ -1.49
ZNF540-205ENST00000587220 DSCR10P59022 87 aa5.74□□□□□ -1.49
ZNF540-205ENST00000587220 Q8N9L7 120 aa5.74□□□□□ -1.49
ZNF540-205ENST00000587220 KRTAP9-6A0A140TA67 174 aa5.73□□□□□ -1.49
ZNF540-205ENST00000587220 RPL37P61927 97 aaKnown RBP5.73□□□□□ -1.49
ZNF540-205ENST00000587220 HCG22E2RYF7 251 aa5.72□□□□□ -1.49
ZNF540-205ENST00000587220 IGFL1Q6UW32 110 aa5.72□□□□□ -1.49
ZNF540-205ENST00000587220 ZCCHC13Q8WW36 166 aaKnown RBP5.72□□□□□ -1.49
ZNF540-205ENST00000587220 H3BPC8 53 aa5.71□□□□□ -1.5
ZNF540-205ENST00000587220 NDUFB1O75438 58 aa5.71□□□□□ -1.5
ZNF540-205ENST00000587220 LCE2CQ5TA81 110 aa5.71□□□□□ -1.5
ZNF540-205ENST00000587220 K7EQZ3 153 aa5.69□□□□□ -1.5
ZNF540-205ENST00000587220 COX6B2Q6YFQ2 88 aa5.69□□□□□ -1.5
ZNF540-205ENST00000587220 MT1HP80294 61 aa5.68□□□□□ -1.5
ZNF540-205ENST00000587220 C4orf26Q17RF5 130 aa5.68□□□□□ -1.5
ZNF540-205ENST00000587220 KRTAP19-2Q3LHN2 52 aa5.68□□□□□ -1.5
ZNF540-205ENST00000587220 CYP4F30PQ9H0H9 118 aa5.68□□□□□ -1.5
ZNF540-205ENST00000587220 LCE2DQ5TA82 110 aaPredicted RBP5.67□□□□□ -1.5
ZNF540-205ENST00000587220 FSIP2Q5CZC0 6907 aa5.67□□□□□ -1.5
ZNF540-205ENST00000587220 M0R2T5 61 aa5.66□□□□□ -1.5
ZNF540-205ENST00000587220 A0A087WSZ3 146 aa5.65□□□□□ -1.5
ZNF540-205ENST00000587220 MP68P56378 58 aa5.65□□□□□ -1.5
ZNF540-205ENST00000587220 ATP11AUNQ6ZP68 121 aa5.65□□□□□ -1.5
ZNF540-205ENST00000587220 hDV103S1A0JD37 113 aa5.64□□□□□ -1.51
ZNF540-205ENST00000587220 A8MWP4 228 aa5.64□□□□□ -1.51
ZNF540-205ENST00000587220 PRR15Q8IV56 129 aa5.64□□□□□ -1.51
ZNF540-205ENST00000587220 SPANXA2-OT1Q8N9U9 137 aa5.63□□□□□ -1.51
ZNF540-205ENST00000587220 LINC00472Q9H8W2 130 aa5.63□□□□□ -1.51
ZNF540-205ENST00000587220 PRO0628Q9UI54 55 aa5.63□□□□□ -1.51
ZNF540-205ENST00000587220 Q75L30 129 aa5.62□□□□□ -1.51
ZNF540-205ENST00000587220 Q96NJ1 140 aa5.62□□□□□ -1.51
ZNF540-205ENST00000587220 TRAV22A0A0B4J277 110 aa5.6□□□□□ -1.51
ZNF540-205ENST00000587220 CASC2Q6XLA1 102 aa5.6□□□□□ -1.51
ZNF540-205ENST00000587220 Q1T7F1 81 aa5.59□□□□□ -1.51
ZNF540-205ENST00000587220 V9GYY9 64 aa5.59□□□□□ -1.51
ZNF540-205ENST00000587220 KRTAP10-6P60371 365 aaPredicted RBP5.58□□□□□ -1.52
ZNF540-205ENST00000587220 TP53AIP1Q9HCN2 124 aa5.58□□□□□ -1.52
ZNF540-205ENST00000587220 LORP23490 312 aaPredicted RBP5.57□□□□□ -1.52
ZNF540-205ENST00000587220 CRCT1Q9UGL9 99 aa5.57□□□□□ -1.52
ZNF540-205ENST00000587220 WFDC13Q8IUB5 93 aa5.56□□□□□ -1.52
ZNF540-205ENST00000587220 C1orf64Q8NEQ6 169 aa5.56□□□□□ -1.52
ZNF540-205ENST00000587220 MMP24-AS1A0A0U1RRL7 71 aa5.55□□□□□ -1.52
ZNF540-205ENST00000587220 H0Y9P7 68 aa5.55□□□□□ -1.52
ZNF540-205ENST00000587220 LINC00208Q96KT6 92 aa5.53□□□□□ -1.52
ZNF540-205ENST00000587220 C20orf166-AS1Q96NR2 134 aa5.53□□□□□ -1.52
ZNF540-205ENST00000587220 FLGP20930 4061 aaPredicted RBP5.51□□□□□ -1.53
ZNF540-205ENST00000587220 A8MUU9 505 aa5.51□□□□□ -1.53
ZNF540-205ENST00000587220 DEFB116Q30KQ4 102 aa5.51□□□□□ -1.53
ZNF540-205ENST00000587220 LINC00313P59037 77 aa5.49□□□□□ -1.53
ZNF540-205ENST00000587220 MPLKIPQ8TAP9 179 aa5.49□□□□□ -1.53
ZNF540-205ENST00000587220 C8orf17Q9NRJ1 99 aa5.49□□□□□ -1.53
ZNF540-205ENST00000587220 A0A1B0GVX0 72 aa5.48□□□□□ -1.53
ZNF540-205ENST00000587220 IGHV6-1A0A0B4J1U7 121 aa5.45□□□□□ -1.54
ZNF540-205ENST00000587220 BRK1Q8WUW1 75 aa5.45□□□□□ -1.54
ZNF540-205ENST00000587220 MRPL34Q9BQ48 92 aaKnown RBP5.44□□□□□ -1.54
ZNF540-205ENST00000587220 KRTAP16-1A8MUX0 517 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms