RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 PKIAP61925 76 aa-1.7□□□□□ -2.68
SMARCE1-219ENST00000583294 VPS8Q8N3P4 1428 aa-1.7□□□□□ -2.68
SMARCE1-219ENST00000583294 ANKRD26Q9UPS8 1709 aa-1.7□□□□□ -2.68
SMARCE1-219ENST00000583294 CCDC88BA6NC98 1476 aa-1.7□□□□□ -2.68
SMARCE1-219ENST00000583294 MYO9AB2RTY4 2548 aa-1.71□□□□□ -2.68
SMARCE1-219ENST00000583294 SMG1Q96Q15 3661 aaKnown RBP-1.71□□□□□ -2.68
SMARCE1-219ENST00000583294 CDC42BPAQ5VT25 1732 aa-1.71□□□□□ -2.68
SMARCE1-219ENST00000583294 DIP2BQ9P265 1576 aa-1.71□□□□□ -2.68
SMARCE1-219ENST00000583294 MT2AP02795 61 aa-1.71□□□□□ -2.68
SMARCE1-219ENST00000583294 MT1GP13640 62 aa-1.71□□□□□ -2.68
SMARCE1-219ENST00000583294 HMGA1P17096 107 aaKnown RBP-1.71□□□□□ -2.68
SMARCE1-219ENST00000583294 NDUFA4O00483 81 aa-1.72□□□□□ -2.68
SMARCE1-219ENST00000583294 S100A8P05109 93 aa-1.72□□□□□ -2.68
SMARCE1-219ENST00000583294 TMEM131LA2VDJ0 1609 aa-1.73□□□□□ -2.69
SMARCE1-219ENST00000583294 BVES-AS1Q5T3Y7 98 aa-1.73□□□□□ -2.69
SMARCE1-219ENST00000583294 S100A16Q96FQ6 103 aaKnown RBP-1.73□□□□□ -2.69
SMARCE1-219ENST00000583294 CCNB3Q8WWL7 1395 aa-1.73□□□□□ -2.69
SMARCE1-219ENST00000583294 ZNF831Q5JPB2 1677 aa-1.74□□□□□ -2.69
SMARCE1-219ENST00000583294 MRPL33O75394 65 aaKnown RBP-1.74□□□□□ -2.69
SMARCE1-219ENST00000583294 THOC2Q8NI27 1593 aaKnown RBP-1.76□□□□□ -2.69
SMARCE1-219ENST00000583294 TOGARAM1Q9Y4F4 1720 aa-1.76□□□□□ -2.69
SMARCE1-219ENST00000583294 MT1BP07438 61 aa-1.76□□□□□ -2.69
SMARCE1-219ENST00000583294 DNAH10Q8IVF4 4471 aa-1.76□□□□□ -2.69
SMARCE1-219ENST00000583294 PEG3Q9GZU2 1588 aa-1.76□□□□□ -2.69
SMARCE1-219ENST00000583294 ARFGEF2Q9Y6D5 1785 aa-1.77□□□□□ -2.69
SMARCE1-219ENST00000583294 H3BUA1 57 aa-1.77□□□□□ -2.69
SMARCE1-219ENST00000583294 NOP10Q9NPE3 64 aaKnown RBP-1.77□□□□□ -2.69
SMARCE1-219ENST00000583294 AKAP12Q02952 1782 aa-1.77□□□□□ -2.69
SMARCE1-219ENST00000583294 RPS27P42677 84 aaKnown RBP-1.78□□□□□ -2.69
SMARCE1-219ENST00000583294 RPS27LQ71UM5 84 aaKnown RBP-1.78□□□□□ -2.69
SMARCE1-219ENST00000583294 Q9H521 79 aa-1.78□□□□□ -2.69
SMARCE1-219ENST00000583294 DNAH5Q8TE73 4624 aa-1.78□□□□□ -2.69
SMARCE1-219ENST00000583294 DDX60LQ5H9U9 1706 aaKnown RBP-1.78□□□□□ -2.69
SMARCE1-219ENST00000583294 ADGRG4Q8IZF6 3080 aa-1.78□□□□□ -2.69
SMARCE1-219ENST00000583294 SPTAN1Q13813 2472 aaKnown RBP-1.79□□□□□ -2.7
SMARCE1-219ENST00000583294 CDC42BPGQ6DT37 1551 aa-1.79□□□□□ -2.7
SMARCE1-219ENST00000583294 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.79□□□□□ -2.7
SMARCE1-219ENST00000583294 NREPQ16612 68 aa-1.79□□□□□ -2.7
SMARCE1-219ENST00000583294 CFAP46Q8IYW2 2715 aa-1.8□□□□□ -2.7
SMARCE1-219ENST00000583294 KIAA0586Q9BVV6 1533 aa-1.8□□□□□ -2.7
SMARCE1-219ENST00000583294 PVALEFA0A1B0GWK0 134 aa-1.8□□□□□ -2.7
SMARCE1-219ENST00000583294 CRIP1P50238 77 aa-1.8□□□□□ -2.7
SMARCE1-219ENST00000583294 KCNQ1DNQ9H478 68 aa-1.8□□□□□ -2.7
SMARCE1-219ENST00000583294 PIK3C2BO00750 1634 aa-1.8□□□□□ -2.7
SMARCE1-219ENST00000583294 V9GYS6 101 aa-1.81□□□□□ -2.7
SMARCE1-219ENST00000583294 MGAQ8IWI9 3026 aa-1.82□□□□□ -2.7
SMARCE1-219ENST00000583294 KANTRA0A1W2PQU2 76 aa-1.82□□□□□ -2.7
SMARCE1-219ENST00000583294 ATP5EP2Q5VTU8 51 aa-1.82□□□□□ -2.7
SMARCE1-219ENST00000583294 MAST1Q9Y2H9 1570 aa-1.82□□□□□ -2.7
SMARCE1-219ENST00000583294 ABCC3O15438 1527 aa-1.82□□□□□ -2.7
SMARCE1-219ENST00000583294 ANKRD36CQ5JPF3 1778 aa-1.82□□□□□ -2.7
SMARCE1-219ENST00000583294 TRRAPQ9Y4A5 3859 aa-1.83□□□□□ -2.7
SMARCE1-219ENST00000583294 ITSN2Q9NZM3 1697 aa-1.83□□□□□ -2.7
SMARCE1-219ENST00000583294 M0QZ58 72 aa-1.83□□□□□ -2.7
SMARCE1-219ENST00000583294 MINOS1Q5TGZ0 78 aa-1.83□□□□□ -2.7
SMARCE1-219ENST00000583294 KIF14Q15058 1648 aa-1.84□□□□□ -2.7
SMARCE1-219ENST00000583294 UBL5Q9BZL1 73 aa-1.84□□□□□ -2.7
SMARCE1-219ENST00000583294 PARP4Q9UKK3 1724 aaKnown RBP-1.84□□□□□ -2.7
SMARCE1-219ENST00000583294 PLCH1Q4KWH8 1693 aa-1.84□□□□□ -2.7
SMARCE1-219ENST00000583294 ZC3H13Q5T200 1668 aaKnown RBP-1.84□□□□□ -2.7
SMARCE1-219ENST00000583294 MAP3K4Q9Y6R4 1608 aa-1.84□□□□□ -2.7
SMARCE1-219ENST00000583294 ITSN1Q15811 1721 aa-1.85□□□□□ -2.71
SMARCE1-219ENST00000583294 DMXL2Q8TDJ6 3036 aa-1.85□□□□□ -2.71
SMARCE1-219ENST00000583294 ITPR2Q14571 2701 aa-1.85□□□□□ -2.71
SMARCE1-219ENST00000583294 CSMD2Q7Z408 3487 aa-1.86□□□□□ -2.71
SMARCE1-219ENST00000583294 ARHGAP35Q9NRY4 1499 aa-1.86□□□□□ -2.71
SMARCE1-219ENST00000583294 LINC01546A6NGU7 62 aa-1.86□□□□□ -2.71
SMARCE1-219ENST00000583294 HFM1A2PYH4 1435 aa-1.86□□□□□ -2.71
SMARCE1-219ENST00000583294 A0A087WXM4 84 aa-1.87□□□□□ -2.71
SMARCE1-219ENST00000583294 C6orf48Q9UBA6 75 aa-1.87□□□□□ -2.71
SMARCE1-219ENST00000583294 KIF1AQ12756 1690 aa-1.87□□□□□ -2.71
SMARCE1-219ENST00000583294 M0QY20 66 aa-1.88□□□□□ -2.71
SMARCE1-219ENST00000583294 RALGAPBQ86X10 1494 aa-1.88□□□□□ -2.71
SMARCE1-219ENST00000583294 LY75O60449 1722 aa-1.88□□□□□ -2.71
SMARCE1-219ENST00000583294 INO80Q9ULG1 1556 aaPredicted RBP-1.89□□□□□ -2.71
SMARCE1-219ENST00000583294 A8MTW9 85 aa-1.89□□□□□ -2.71
SMARCE1-219ENST00000583294 DEFB121Q5J5C9 76 aa-1.89□□□□□ -2.71
SMARCE1-219ENST00000583294 SMIM13P0DJ93 91 aa-1.9□□□□□ -2.71
SMARCE1-219ENST00000583294 KRTAP20-1Q3LI63 56 aa-1.9□□□□□ -2.71
SMARCE1-219ENST00000583294 RNF17Q9BXT8 1623 aaKnown RBP-1.91□□□□□ -2.71
SMARCE1-219ENST00000583294 ETDCA0A1B0GVM5 59 aa-1.91□□□□□ -2.72
SMARCE1-219ENST00000583294 TDRG1Q3Y452 100 aa-1.91□□□□□ -2.72
SMARCE1-219ENST00000583294 RICTORQ6R327 1708 aa-1.91□□□□□ -2.72
SMARCE1-219ENST00000583294 PPLO60437 1756 aa-1.92□□□□□ -2.72
SMARCE1-219ENST00000583294 CD163L1Q9NR16 1453 aa-1.92□□□□□ -2.72
SMARCE1-219ENST00000583294 SPART-AS1P0CW21 52 aa-1.92□□□□□ -2.72
SMARCE1-219ENST00000583294 FCER1GP30273 86 aa-1.92□□□□□ -2.72
SMARCE1-219ENST00000583294 NCBP2-AS2Q69YL0 99 aa-1.92□□□□□ -2.72
SMARCE1-219ENST00000583294 CFAP43Q8NDM7 1665 aa-1.93□□□□□ -2.72
SMARCE1-219ENST00000583294 TLN1Q9Y490 2541 aaKnown RBP-1.93□□□□□ -2.72
SMARCE1-219ENST00000583294 DEFB4AO15263 64 aa-1.93□□□□□ -2.72
SMARCE1-219ENST00000583294 UACAQ9BZF9 1416 aa-1.93□□□□□ -2.72
SMARCE1-219ENST00000583294 TTC37Q6PGP7 1564 aa-1.93□□□□□ -2.72
SMARCE1-219ENST00000583294 SFTA3P0C7M3 94 aa-1.94□□□□□ -2.72
SMARCE1-219ENST00000583294 TJP1Q07157 1748 aa-1.94□□□□□ -2.72
SMARCE1-219ENST00000583294 LRRIQ1Q96JM4 1722 aa-1.95□□□□□ -2.72
SMARCE1-219ENST00000583294 ATMQ13315 3056 aa-1.95□□□□□ -2.72
SMARCE1-219ENST00000583294 KDM5DQ9BY66 1539 aa-1.96□□□□□ -2.72
SMARCE1-219ENST00000583294 SMARCA2P51531 1590 aa-1.96□□□□□ -2.72
SMARCE1-219ENST00000583294 ENHOQ6UWT2 76 aa-1.96□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 259.9 ms