RNA–Protein interactions for RNA: ENST00000580542.5

ITGB4-207, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-207ENST00000580542 ZNF706Q9Y5V0 76 aaPredicted RBP8.37□□□□□ -1.07
ITGB4-207ENST00000580542 A0A087X002 238 aa8.37□□□□□ -1.07
ITGB4-207ENST00000580542 DNAH10Q8IVF4 4471 aa8.35□□□□□ -1.07
ITGB4-207ENST00000580542 A0A1B0GU69 56 aa8.35□□□□□ -1.07
ITGB4-207ENST00000580542 SPATA8Q6RVD6 105 aa8.34□□□□□ -1.07
ITGB4-207ENST00000580542 TENM2Q9NT68 2774 aa8.34□□□□□ -1.07
ITGB4-207ENST00000580542 A0A096LNI7 61 aa8.33□□□□□ -1.08
ITGB4-207ENST00000580542 MIR22HGQ0VDD5 57 aa8.33□□□□□ -1.08
ITGB4-207ENST00000580542 KRTAP1-5Q9BYS1 174 aa8.33□□□□□ -1.08
ITGB4-207ENST00000580542 C1orf134Q5TEV5 83 aa8.32□□□□□ -1.08
ITGB4-207ENST00000580542 ALMS1Q8TCU4 4167 aa8.29□□□□□ -1.08
ITGB4-207ENST00000580542 ACYP2P14621 99 aa8.29□□□□□ -1.08
ITGB4-207ENST00000580542 UBE2DNLQ8IWF7 75 aa8.29□□□□□ -1.08
ITGB4-207ENST00000580542 C8orf17Q9NRJ1 99 aa8.28□□□□□ -1.08
ITGB4-207ENST00000580542 UQCR11O14957 56 aa8.27□□□□□ -1.08
ITGB4-207ENST00000580542 KMT2AQ03164 3969 aa8.26□□□□□ -1.09
ITGB4-207ENST00000580542 DNAH2Q9P225 4427 aa8.26□□□□□ -1.09
ITGB4-207ENST00000580542 SRRM2Q9UQ35 2752 aaKnown RBP8.26□□□□□ -1.09
ITGB4-207ENST00000580542 IGHV6-1A0A0B4J1U7 121 aa8.25□□□□□ -1.09
ITGB4-207ENST00000580542 NBDYA0A0U1RRE5 68 aa8.25□□□□□ -1.09
ITGB4-207ENST00000580542 TGP01266 2768 aa8.24□□□□□ -1.09
ITGB4-207ENST00000580542 WWC2-AS2Q96NR7 200 aa8.23□□□□□ -1.09
ITGB4-207ENST00000580542 Q6ZRN7 208 aaPredicted RBP8.22□□□□□ -1.09
ITGB4-207ENST00000580542 KRTAP11-1Q8IUC1 163 aa8.22□□□□□ -1.09
ITGB4-207ENST00000580542 MRPL34Q9BQ48 92 aaKnown RBP8.21□□□□□ -1.1
ITGB4-207ENST00000580542 FRAS1Q86XX4 4008 aa8.19□□□□□ -1.1
ITGB4-207ENST00000580542 DNAH17Q9UFH2 4485 aa8.19□□□□□ -1.1
ITGB4-207ENST00000580542 CDK2AP2O75956 126 aa8.18□□□□□ -1.1
ITGB4-207ENST00000580542 CHTF8P0CG12 524 aa8.18□□□□□ -1.1
ITGB4-207ENST00000580542 ROMO1P60602 79 aa8.18□□□□□ -1.1
ITGB4-207ENST00000580542 HECTD4Q9Y4D8 3996 aa8.17□□□□□ -1.1
ITGB4-207ENST00000580542 ZNF861PO60384 105 aa8.17□□□□□ -1.1
ITGB4-207ENST00000580542 Q96NJ1 140 aa8.17□□□□□ -1.1
ITGB4-207ENST00000580542 A0A1B0GVX0 72 aa8.16□□□□□ -1.1
ITGB4-207ENST00000580542 SPRR1BP22528 89 aa8.15□□□□□ -1.1
ITGB4-207ENST00000580542 C14orf177Q52M58 125 aa8.15□□□□□ -1.1
ITGB4-207ENST00000580542 Q5W150 140 aa8.12□□□□□ -1.11
ITGB4-207ENST00000580542 DMAC1Q96GE9 116 aa8.12□□□□□ -1.11
ITGB4-207ENST00000580542 NOTCH2NLQ7Z3S9 236 aa8.11□□□□□ -1.11
ITGB4-207ENST00000580542 IGLV9-49A0A0B4J1Y8 123 aa8.1□□□□□ -1.11
ITGB4-207ENST00000580542 SACSQ9NZJ4 4579 aa8.1□□□□□ -1.11
ITGB4-207ENST00000580542 DNAH11Q96DT5 4516 aa8.09□□□□□ -1.11
ITGB4-207ENST00000580542 HYDINQ4G0P3 5121 aa8.08□□□□□ -1.12
ITGB4-207ENST00000580542 KRTAP25-1Q3LHN0 102 aa8.08□□□□□ -1.12
ITGB4-207ENST00000580542 FAT2Q9NYQ8 4349 aa8.08□□□□□ -1.12
ITGB4-207ENST00000580542 A0A087WTM6 91 aa8.06□□□□□ -1.12
ITGB4-207ENST00000580542 PANO1I0J062 215 aa8.06□□□□□ -1.12
ITGB4-207ENST00000580542 LY6G6CO95867 125 aa8.05□□□□□ -1.12
ITGB4-207ENST00000580542 KRTAP13-1Q8IUC0 172 aa8.05□□□□□ -1.12
ITGB4-207ENST00000580542 PKD1P98161 4303 aa8.02□□□□□ -1.13
ITGB4-207ENST00000580542 DNAH5Q8TE73 4624 aa8.02□□□□□ -1.13
ITGB4-207ENST00000580542 KRTAP13-3Q3SY46 172 aa8.02□□□□□ -1.13
ITGB4-207ENST00000580542 DNAH8Q96JB1 4490 aa8.01□□□□□ -1.13
ITGB4-207ENST00000580542 SPINK6Q6UWN8 80 aa7.98□□□□□ -1.13
ITGB4-207ENST00000580542 IGLV7-43P04211 117 aa7.98□□□□□ -1.13
ITGB4-207ENST00000580542 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.97□□□□□ -1.13
ITGB4-207ENST00000580542 IGLV5-52A0A0A0MRZ9 124 aa7.96□□□□□ -1.13
ITGB4-207ENST00000580542 P0C880 135 aa7.95□□□□□ -1.14
ITGB4-207ENST00000580542 SPACA4Q8TDM5 124 aa7.94□□□□□ -1.14
ITGB4-207ENST00000580542 A8MUU9 505 aa7.94□□□□□ -1.14
ITGB4-207ENST00000580542 LINC00483Q53H64 154 aa7.93□□□□□ -1.14
ITGB4-207ENST00000580542 RYR2Q92736 4967 aa7.92□□□□□ -1.14
ITGB4-207ENST00000580542 LINC00304Q8N9R0 145 aa7.91□□□□□ -1.14
ITGB4-207ENST00000580542 CRIPTQ9P021 101 aa7.88□□□□□ -1.15
ITGB4-207ENST00000580542 SPINK1P00995 79 aa7.87□□□□□ -1.15
ITGB4-207ENST00000580542 KMT2CQ8NEZ4 4911 aaKnown RBP7.87□□□□□ -1.15
ITGB4-207ENST00000580542 FAM229AH3BQW9 127 aa7.86□□□□□ -1.15
ITGB4-207ENST00000580542 KRTAP10-2P60368 255 aa7.86□□□□□ -1.15
ITGB4-207ENST00000580542 ANAPC11Q9NYG5 84 aa7.86□□□□□ -1.15
ITGB4-207ENST00000580542 IGKV2-30P06310 120 aa7.86□□□□□ -1.15
ITGB4-207ENST00000580542 PSORS1C2Q9UIG4 136 aa7.86□□□□□ -1.15
ITGB4-207ENST00000580542 FLG2Q5D862 2391 aaPredicted RBP7.85□□□□□ -1.15
ITGB4-207ENST00000580542 PKHD1P08F94 4074 aa7.83□□□□□ -1.16
ITGB4-207ENST00000580542 Q6ZSA8 131 aa7.82□□□□□ -1.16
ITGB4-207ENST00000580542 H0YAA0 97 aa7.81□□□□□ -1.16
ITGB4-207ENST00000580542 IGKV2D-30A0A075B6S6 120 aa7.8□□□□□ -1.16
ITGB4-207ENST00000580542 SSBP3-AS1Q7Z2R9 100 aa7.8□□□□□ -1.16
ITGB4-207ENST00000580542 A0A0A0MQY5 61 aa7.78□□□□□ -1.16
ITGB4-207ENST00000580542 LRP1BQ9NZR2 4599 aa7.78□□□□□ -1.16
ITGB4-207ENST00000580542 DYNC1H1Q14204 4646 aaKnown RBP7.78□□□□□ -1.16
ITGB4-207ENST00000580542 A0A1B0GVY2 172 aa7.76□□□□□ -1.17
ITGB4-207ENST00000580542 KRTAP10-1P60331 282 aa7.76□□□□□ -1.17
ITGB4-207ENST00000580542 SPINT4Q6UDR6 99 aa7.76□□□□□ -1.17
ITGB4-207ENST00000580542 CIRBP-AS1Q8TBR5 109 aa7.73□□□□□ -1.17
ITGB4-207ENST00000580542 NDUFAF8A1L188 74 aa7.71□□□□□ -1.17
ITGB4-207ENST00000580542 RYR3Q15413 4870 aa7.7□□□□□ -1.18
ITGB4-207ENST00000580542 APOBP04114 4563 aaKnown RBP7.7□□□□□ -1.18
ITGB4-207ENST00000580542 VPS13BQ7Z7G8 4022 aa7.69□□□□□ -1.18
ITGB4-207ENST00000580542 A0A1B0GU33 70 aa7.69□□□□□ -1.18
ITGB4-207ENST00000580542 KRTAP16-1A8MUX0 517 aa7.68□□□□□ -1.18
ITGB4-207ENST00000580542 K7ERS5 55 aa7.68□□□□□ -1.18
ITGB4-207ENST00000580542 Q8N1X5 172 aa7.66□□□□□ -1.18
ITGB4-207ENST00000580542 C20orf166-AS1Q96NR2 134 aa7.65□□□□□ -1.18
ITGB4-207ENST00000580542 TYMSOSQ8TAI1 123 aa7.64□□□□□ -1.19
ITGB4-207ENST00000580542 H1FX-AS1Q4G0G2 97 aa7.6□□□□□ -1.19
ITGB4-207ENST00000580542 PKHD1L1Q86WI1 4243 aa7.56□□□□□ -1.2
ITGB4-207ENST00000580542 KRTAP13-2Q52LG2 175 aa7.55□□□□□ -1.2
ITGB4-207ENST00000580542 FAT1Q14517 4588 aa7.52□□□□□ -1.21
ITGB4-207ENST00000580542 KRTAP15-1Q3LI76 137 aa7.5□□□□□ -1.21
ITGB4-207ENST00000580542 HSPG2P98160 4391 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms