RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 H3BT86 120 aa3.84□□□□□ -1.79
CDK5RAP3-209ENST00000578663 SMCPP49901 116 aaPredicted RBP3.84□□□□□ -1.79
CDK5RAP3-209ENST00000578663 PRO0461Q9UI25 63 aa3.84□□□□□ -1.79
CDK5RAP3-209ENST00000578663 A0A1W2PNM2 257 aa3.83□□□□□ -1.8
CDK5RAP3-209ENST00000578663 CD164Q04900 197 aa3.83□□□□□ -1.8
CDK5RAP3-209ENST00000578663 TRBV7-4A0A0J9YYF1 115 aa3.82□□□□□ -1.8
CDK5RAP3-209ENST00000578663 TRBV7-7A0A0K0K1E9 115 aa3.82□□□□□ -1.8
CDK5RAP3-209ENST00000578663 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
CDK5RAP3-209ENST00000578663 RBM3P98179 157 aaKnown RBP3.81□□□□□ -1.8
CDK5RAP3-209ENST00000578663 LIMD2Q9BT23 127 aa3.81□□□□□ -1.8
CDK5RAP3-209ENST00000578663 F8W1H4 67 aa3.8□□□□□ -1.8
CDK5RAP3-209ENST00000578663 JMJD7-PLA2G4BH0Y9G9 81 aa3.8□□□□□ -1.8
CDK5RAP3-209ENST00000578663 Q5XG85 94 aa3.8□□□□□ -1.8
CDK5RAP3-209ENST00000578663 Q6Q795 121 aa3.8□□□□□ -1.8
CDK5RAP3-209ENST00000578663 TEN1Q86WV5 123 aa3.8□□□□□ -1.8
CDK5RAP3-209ENST00000578663 OBSCN-AS1Q96MR7 158 aa3.8□□□□□ -1.8
CDK5RAP3-209ENST00000578663 DSCR8Q96T75 97 aa3.8□□□□□ -1.8
CDK5RAP3-209ENST00000578663 C14orf132Q9NPU4 83 aa3.8□□□□□ -1.8
CDK5RAP3-209ENST00000578663 A0A087WSZ3 146 aa3.79□□□□□ -1.8
CDK5RAP3-209ENST00000578663 LOC110117498A0A087WWA1 95 aa3.79□□□□□ -1.8
CDK5RAP3-209ENST00000578663 CCKP06307 115 aa3.79□□□□□ -1.8
CDK5RAP3-209ENST00000578663 Q6ZQT0 140 aa3.79□□□□□ -1.8
CDK5RAP3-209ENST00000578663 VPS25Q9BRG1 176 aa3.79□□□□□ -1.8
CDK5RAP3-209ENST00000578663 C9orf92A6NGG3 77 aa3.78□□□□□ -1.8
CDK5RAP3-209ENST00000578663 RPL37P61927 97 aaKnown RBP3.78□□□□□ -1.8
CDK5RAP3-209ENST00000578663 C1orf195Q5TG92 126 aa3.78□□□□□ -1.8
CDK5RAP3-209ENST00000578663 LINC00846Q9NV44 126 aa3.78□□□□□ -1.8
CDK5RAP3-209ENST00000578663 SS18L2Q9UHA2 77 aa3.76□□□□□ -1.81
CDK5RAP3-209ENST00000578663 K7ERU9 68 aa3.75□□□□□ -1.81
CDK5RAP3-209ENST00000578663 PDE6GP18545 87 aa3.75□□□□□ -1.81
CDK5RAP3-209ENST00000578663 ETDBQ3ZM63 59 aa3.75□□□□□ -1.81
CDK5RAP3-209ENST00000578663 Q96NJ1 140 aa3.75□□□□□ -1.81
CDK5RAP3-209ENST00000578663 J3QR89 54 aa3.74□□□□□ -1.81
CDK5RAP3-209ENST00000578663 DEFB116Q30KQ4 102 aa3.73□□□□□ -1.81
CDK5RAP3-209ENST00000578663 LINC00472Q9H8W2 130 aa3.73□□□□□ -1.81
CDK5RAP3-209ENST00000578663 C21orf62-AS1Q17RA5 79 aa3.72□□□□□ -1.81
CDK5RAP3-209ENST00000578663 KRTAP9-3Q9BYQ3 159 aa3.72□□□□□ -1.81
CDK5RAP3-209ENST00000578663 A0A1B0GW54 56 aa3.71□□□□□ -1.82
CDK5RAP3-209ENST00000578663 MT2AP02795 61 aa3.71□□□□□ -1.82
CDK5RAP3-209ENST00000578663 SIGMAR1Q99720 223 aa3.71□□□□□ -1.82
CDK5RAP3-209ENST00000578663 KRTAP2-2Q9BYT5 123 aa3.71□□□□□ -1.82
CDK5RAP3-209ENST00000578663 KRTAP2-1Q9BYU5 128 aa3.71□□□□□ -1.82
CDK5RAP3-209ENST00000578663 IGKV4-1P06312 121 aa3.7□□□□□ -1.82
CDK5RAP3-209ENST00000578663 NREPQ16612 68 aa3.68□□□□□ -1.82
CDK5RAP3-209ENST00000578663 Q6ZVQ6 151 aa3.68□□□□□ -1.82
CDK5RAP3-209ENST00000578663 MT1FP04733 61 aa3.67□□□□□ -1.82
CDK5RAP3-209ENST00000578663 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
CDK5RAP3-209ENST00000578663 DSCR10P59022 87 aa3.67□□□□□ -1.82
CDK5RAP3-209ENST00000578663 J3KT08 172 aa3.66□□□□□ -1.82
CDK5RAP3-209ENST00000578663 NOTCH2NLQ7Z3S9 236 aa3.66□□□□□ -1.82
CDK5RAP3-209ENST00000578663 IGHV6-1A0A0B4J1U7 121 aa3.65□□□□□ -1.83
CDK5RAP3-209ENST00000578663 IGKV3D-7A0A0C4DH55 119 aa3.65□□□□□ -1.83
CDK5RAP3-209ENST00000578663 A0A1B0GVX0 72 aa3.65□□□□□ -1.83
CDK5RAP3-209ENST00000578663 A8MWP4 228 aa3.64□□□□□ -1.83
CDK5RAP3-209ENST00000578663 BPY2O14599 106 aa3.64□□□□□ -1.83
CDK5RAP3-209ENST00000578663 UBL5Q9BZL1 73 aa3.64□□□□□ -1.83
CDK5RAP3-209ENST00000578663 FAM240AA0A1B0GVK7 77 aa3.63□□□□□ -1.83
CDK5RAP3-209ENST00000578663 KRTAP16-1A8MUX0 517 aa3.63□□□□□ -1.83
CDK5RAP3-209ENST00000578663 K7EQZ3 153 aa3.63□□□□□ -1.83
CDK5RAP3-209ENST00000578663 ACYP1P07311 99 aa3.63□□□□□ -1.83
CDK5RAP3-209ENST00000578663 LINC00313P59037 77 aa3.63□□□□□ -1.83
CDK5RAP3-209ENST00000578663 KRTAP10-10P60014 251 aa3.63□□□□□ -1.83
CDK5RAP3-209ENST00000578663 ATP11AUNQ6ZP68 121 aa3.63□□□□□ -1.83
CDK5RAP3-209ENST00000578663 Q75L30 129 aa3.63□□□□□ -1.83
CDK5RAP3-209ENST00000578663 Q8N9L7 120 aa3.63□□□□□ -1.83
CDK5RAP3-209ENST00000578663 C8orf87E5RJ46 101 aa3.62□□□□□ -1.83
CDK5RAP3-209ENST00000578663 NDUFB1O75438 58 aa3.62□□□□□ -1.83
CDK5RAP3-209ENST00000578663 PRR15Q8IV56 129 aa3.62□□□□□ -1.83
CDK5RAP3-209ENST00000578663 C8orf17Q9NRJ1 99 aa3.62□□□□□ -1.83
CDK5RAP3-209ENST00000578663 C20orf166-AS1Q96NR2 134 aa3.61□□□□□ -1.83
CDK5RAP3-209ENST00000578663 MMP24-AS1A0A0U1RRL7 71 aa3.6□□□□□ -1.83
CDK5RAP3-209ENST00000578663 A8MUU9 505 aa3.6□□□□□ -1.83
CDK5RAP3-209ENST00000578663 CXCL6P80162 114 aa3.58□□□□□ -1.84
CDK5RAP3-209ENST00000578663 SCGB1A1P11684 91 aa3.57□□□□□ -1.84
CDK5RAP3-209ENST00000578663 WFDC13Q8IUB5 93 aa3.57□□□□□ -1.84
CDK5RAP3-209ENST00000578663 TMEM254Q8TBM7 123 aa3.57□□□□□ -1.84
CDK5RAP3-209ENST00000578663 hDV103S1A0JD37 113 aa3.56□□□□□ -1.84
CDK5RAP3-209ENST00000578663 ATP5EP2Q5VTU8 51 aa3.56□□□□□ -1.84
CDK5RAP3-209ENST00000578663 LINC00643Q86TS7 51 aa3.56□□□□□ -1.84
CDK5RAP3-209ENST00000578663 Q8N9P0 234 aaPredicted RBP3.56□□□□□ -1.84
CDK5RAP3-209ENST00000578663 MRPL34Q9BQ48 92 aaKnown RBP3.56□□□□□ -1.84
CDK5RAP3-209ENST00000578663 HCG22E2RYF7 251 aa3.55□□□□□ -1.84
CDK5RAP3-209ENST00000578663 CASC2Q6XLA1 102 aa3.55□□□□□ -1.84
CDK5RAP3-209ENST00000578663 MT-ATP8P03928 68 aa3.54□□□□□ -1.84
CDK5RAP3-209ENST00000578663 IMUPQ9GZP8 106 aa3.54□□□□□ -1.84
CDK5RAP3-209ENST00000578663 FAM236DA0A1B0GTK5 79 aa3.53□□□□□ -1.84
CDK5RAP3-209ENST00000578663 FAM236CP0DP71 79 aa3.53□□□□□ -1.84
CDK5RAP3-209ENST00000578663 HIST1H4AP62805 103 aaKnown RBP3.53□□□□□ -1.84
CDK5RAP3-209ENST00000578663 A0A087WVE0 104 aa3.52□□□□□ -1.85
CDK5RAP3-209ENST00000578663 NDUFS5O43920 106 aa3.52□□□□□ -1.85
CDK5RAP3-209ENST00000578663 PCP4P48539 62 aa3.52□□□□□ -1.85
CDK5RAP3-209ENST00000578663 MPLKIPQ8TAP9 179 aa3.52□□□□□ -1.85
CDK5RAP3-209ENST00000578663 ZCCHC13Q8WW36 166 aaKnown RBP3.52□□□□□ -1.85
CDK5RAP3-209ENST00000578663 RBM12B-AS1Q9P1G2 102 aa3.5□□□□□ -1.85
CDK5RAP3-209ENST00000578663 Q5W150 140 aa3.49□□□□□ -1.85
CDK5RAP3-209ENST00000578663 HRES1P13985 223 aa3.47□□□□□ -1.85
CDK5RAP3-209ENST00000578663 SPRR2EP22531 72 aa3.47□□□□□ -1.85
CDK5RAP3-209ENST00000578663 SPRR2BP35325 72 aa3.47□□□□□ -1.85
CDK5RAP3-209ENST00000578663 SPRR2AP35326 72 aa3.47□□□□□ -1.85
CDK5RAP3-209ENST00000578663 SPINK7P58062 85 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms