RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 F8WEM9 126 aa2.49□□□□□ -2.01
PTPRM-208ENST00000578600 HBDP02042 147 aa2.49□□□□□ -2.01
PTPRM-208ENST00000578600 BAGE3Q86Y29 109 aa2.49□□□□□ -2.01
PTPRM-208ENST00000578600 Q8NDZ9 215 aa2.49□□□□□ -2.01
PTPRM-208ENST00000578600 NHP2Q9NX24 153 aaKnown RBP2.49□□□□□ -2.01
PTPRM-208ENST00000578600 TRBV7-6A0A0J9YX20 115 aa2.48□□□□□ -2.01
PTPRM-208ENST00000578600 A8MUN3 132 aa2.48□□□□□ -2.01
PTPRM-208ENST00000578600 Q6JHZ5 121 aa2.48□□□□□ -2.01
PTPRM-208ENST00000578600 S100PP25815 95 aa2.47□□□□□ -2.01
PTPRM-208ENST00000578600 COPS9Q8WXC6 57 aa2.47□□□□□ -2.01
PTPRM-208ENST00000578600 OBSCN-AS1Q96MR7 158 aa2.47□□□□□ -2.01
PTPRM-208ENST00000578600 TRAV12-1A0A0B4J245 112 aa2.46□□□□□ -2.02
PTPRM-208ENST00000578600 Q96NJ1 140 aa2.46□□□□□ -2.02
PTPRM-208ENST00000578600 SPANXDQ9BXN6 97 aa2.46□□□□□ -2.02
PTPRM-208ENST00000578600 SEC11CQ9BY50 192 aa2.46□□□□□ -2.02
PTPRM-208ENST00000578600 SS18L2Q9UHA2 77 aa2.46□□□□□ -2.02
PTPRM-208ENST00000578600 MT1FP04733 61 aa2.45□□□□□ -2.02
PTPRM-208ENST00000578600 COX7BP24311 80 aa2.45□□□□□ -2.02
PTPRM-208ENST00000578600 DEFB105AQ8NG35 78 aa2.45□□□□□ -2.02
PTPRM-208ENST00000578600 OR13C6PQ8NH95 151 aa2.45□□□□□ -2.02
PTPRM-208ENST00000578600 SPANXCQ9NY87 97 aa2.45□□□□□ -2.02
PTPRM-208ENST00000578600 TRAV13-2A0A0B4J235 113 aa2.44□□□□□ -2.02
PTPRM-208ENST00000578600 A0A0G2JQZ4 141 aa2.44□□□□□ -2.02
PTPRM-208ENST00000578600 ELOF1P60002 83 aaKnown RBP2.44□□□□□ -2.02
PTPRM-208ENST00000578600 ANKRD29Q8N6D5 301 aa2.44□□□□□ -2.02
PTPRM-208ENST00000578600 IGLV5-48A0A075B6I7 105 aa2.43□□□□□ -2.02
PTPRM-208ENST00000578600 LEPROTO15243 131 aa2.43□□□□□ -2.02
PTPRM-208ENST00000578600 KRTAP2-3P0C7H8 128 aa2.43□□□□□ -2.02
PTPRM-208ENST00000578600 PLNP26678 52 aa2.43□□□□□ -2.02
PTPRM-208ENST00000578600 KRTAP2-4Q9BYR9 128 aa2.43□□□□□ -2.02
PTPRM-208ENST00000578600 TRBV7-7A0A0K0K1E9 115 aa2.42□□□□□ -2.02
PTPRM-208ENST00000578600 H3BT86 120 aa2.42□□□□□ -2.02
PTPRM-208ENST00000578600 CLEC2BQ92478 149 aa2.42□□□□□ -2.02
PTPRM-208ENST00000578600 J3QQQ9 107 aa2.41□□□□□ -2.02
PTPRM-208ENST00000578600 SNCGO76070 127 aa2.41□□□□□ -2.02
PTPRM-208ENST00000578600 PPDPFLQ8WWR9 84 aa2.41□□□□□ -2.02
PTPRM-208ENST00000578600 IFI27L1Q96BM0 104 aa2.41□□□□□ -2.02
PTPRM-208ENST00000578600 CHCHD1Q96BP2 118 aaKnown RBP2.41□□□□□ -2.02
PTPRM-208ENST00000578600 TMEM258P61165 79 aa2.4□□□□□ -2.03
PTPRM-208ENST00000578600 HIST1H4AP62805 103 aaKnown RBP2.4□□□□□ -2.03
PTPRM-208ENST00000578600 A6NN06 94 aa2.39□□□□□ -2.03
PTPRM-208ENST00000578600 TIMM17BO60830 172 aa2.39□□□□□ -2.03
PTPRM-208ENST00000578600 C3orf79P0CE67 100 aa2.39□□□□□ -2.03
PTPRM-208ENST00000578600 SOSTDC1Q6X4U4 206 aa2.39□□□□□ -2.03
PTPRM-208ENST00000578600 TRAV7A0A075B6U4 112 aa2.38□□□□□ -2.03
PTPRM-208ENST00000578600 HIST1H2BOP23527 126 aa2.38□□□□□ -2.03
PTPRM-208ENST00000578600 HIST1H2BBP33778 126 aa2.38□□□□□ -2.03
PTPRM-208ENST00000578600 HIST1H2BDP58876 126 aa2.38□□□□□ -2.03
PTPRM-208ENST00000578600 HIST1H2BCP62807 126 aa2.38□□□□□ -2.03
PTPRM-208ENST00000578600 HIST2H2BEQ16778 126 aa2.38□□□□□ -2.03
PTPRM-208ENST00000578600 OCIAD2Q56VL3 154 aa2.38□□□□□ -2.03
PTPRM-208ENST00000578600 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.38□□□□□ -2.03
PTPRM-208ENST00000578600 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
PTPRM-208ENST00000578600 LCE1BQ5T7P3 118 aa2.38□□□□□ -2.03
PTPRM-208ENST00000578600 HIST1H2BHQ93079 126 aa2.38□□□□□ -2.03
PTPRM-208ENST00000578600 HIST1H2BNQ99877 126 aa2.38□□□□□ -2.03
PTPRM-208ENST00000578600 HIST1H2BMQ99879 126 aa2.38□□□□□ -2.03
PTPRM-208ENST00000578600 KRTAP4-3Q9BYR4 195 aa2.38□□□□□ -2.03
PTPRM-208ENST00000578600 DPM2O94777 84 aa2.37□□□□□ -2.03
PTPRM-208ENST00000578600 C18orf32Q8TCD1 76 aa2.37□□□□□ -2.03
PTPRM-208ENST00000578600 ZCCHC13Q8WW36 166 aaKnown RBP2.37□□□□□ -2.03
PTPRM-208ENST00000578600 SNHG12Q9BXW3 62 aa2.37□□□□□ -2.03
PTPRM-208ENST00000578600 PRO2289Q9P1D8 64 aa2.37□□□□□ -2.03
PTPRM-208ENST00000578600 HSPB8Q9UJY1 196 aa2.37□□□□□ -2.03
PTPRM-208ENST00000578600 LINC00308Q8TCZ7 52 aa2.36□□□□□ -2.03
PTPRM-208ENST00000578600 SIGMAR1Q99720 223 aa2.36□□□□□ -2.03
PTPRM-208ENST00000578600 MUC12Q9UKN1 5478 aa2.35□□□□□ -2.03
PTPRM-208ENST00000578600 OBSCNQ5VST9 7968 aa2.35□□□□□ -2.03
PTPRM-208ENST00000578600 IGKCP01834 107 aa2.35□□□□□ -2.03
PTPRM-208ENST00000578600 IFITM1P13164 125 aa2.35□□□□□ -2.03
PTPRM-208ENST00000578600 KTN1-AS1Q86SY8 53 aa2.35□□□□□ -2.03
PTPRM-208ENST00000578600 TEN1Q86WV5 123 aa2.35□□□□□ -2.03
PTPRM-208ENST00000578600 DSCR8Q96T75 97 aa2.35□□□□□ -2.03
PTPRM-208ENST00000578600 C12orf57Q99622 126 aa2.35□□□□□ -2.03
PTPRM-208ENST00000578600 hADV29S1A0JD25 119 aa2.34□□□□□ -2.03
PTPRM-208ENST00000578600 LEPROTL1O95214 131 aa2.34□□□□□ -2.03
PTPRM-208ENST00000578600 PMCHL1Q16048 86 aa2.34□□□□□ -2.03
PTPRM-208ENST00000578600 KRTAP2-1Q9BYU5 128 aa2.34□□□□□ -2.03
PTPRM-208ENST00000578600 NPC2P61916 151 aa2.33□□□□□ -2.04
PTPRM-208ENST00000578600 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.33□□□□□ -2.04
PTPRM-208ENST00000578600 TRGC2P03986 189 aa2.32□□□□□ -2.04
PTPRM-208ENST00000578600 KMT2DO14686 5537 aa2.32□□□□□ -2.04
PTPRM-208ENST00000578600 SPINK7P58062 85 aa2.31□□□□□ -2.04
PTPRM-208ENST00000578600 NDUFA5Q16718 116 aa2.31□□□□□ -2.04
PTPRM-208ENST00000578600 BVES-AS1Q5T3Y7 98 aa2.31□□□□□ -2.04
PTPRM-208ENST00000578600 Q5VV11 94 aa2.31□□□□□ -2.04
PTPRM-208ENST00000578600 LINC00575Q6W349 94 aa2.31□□□□□ -2.04
PTPRM-208ENST00000578600 Q6ZQY7 126 aa2.31□□□□□ -2.04
PTPRM-208ENST00000578600 TMEM218A2RU14 115 aa2.3□□□□□ -2.04
PTPRM-208ENST00000578600 GPR98Q8WXG9 6306 aa2.29□□□□□ -2.04
PTPRM-208ENST00000578600 FXYD2P54710 66 aa2.29□□□□□ -2.04
PTPRM-208ENST00000578600 MDN1Q9NU22 5596 aa2.29□□□□□ -2.04
PTPRM-208ENST00000578600 A0A087WSZ3 146 aa2.28□□□□□ -2.04
PTPRM-208ENST00000578600 H1FX-AS1Q4G0G2 97 aa2.28□□□□□ -2.04
PTPRM-208ENST00000578600 LYRM7Q5U5X0 104 aa2.28□□□□□ -2.04
PTPRM-208ENST00000578600 SMIM11BQ8TCY0 68 aa2.28□□□□□ -2.04
PTPRM-208ENST00000578600 RAB37Q96AX2 223 aa2.28□□□□□ -2.04
PTPRM-208ENST00000578600 IMUPQ9GZP8 106 aa2.28□□□□□ -2.04
PTPRM-208ENST00000578600 WFDC13Q8IUB5 93 aa2.27□□□□□ -2.05
PTPRM-208ENST00000578600 TRBV7-4A0A0J9YYF1 115 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms