RNA–Protein interactions for RNA: ENST00000578593.1

DDX42-207, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 2,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-207ENST00000578593 SRRM2Q9UQ35 2752 aaKnown RBP4.53□□□□□ -1.68
DDX42-207ENST00000578593 ALMS1Q8TCU4 4167 aa4.53□□□□□ -1.68
DDX42-207ENST00000578593 IGKV2-24A0A0C4DH68 120 aa4.52□□□□□ -1.69
DDX42-207ENST00000578593 NOTCH1P46531 2555 aa4.52□□□□□ -1.69
DDX42-207ENST00000578593 DNAH1Q9P2D7 4330 aa4.52□□□□□ -1.69
DDX42-207ENST00000578593 TENM3Q9P273 2699 aa4.51□□□□□ -1.69
DDX42-207ENST00000578593 PRLHP81277 87 aa4.51□□□□□ -1.69
DDX42-207ENST00000578593 LINC01556Q5JQF7 62 aa4.51□□□□□ -1.69
DDX42-207ENST00000578593 DMAC1Q96GE9 116 aa4.51□□□□□ -1.69
DDX42-207ENST00000578593 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.51□□□□□ -1.69
DDX42-207ENST00000578593 TENM2Q9NT68 2774 aa4.5□□□□□ -1.69
DDX42-207ENST00000578593 CSMD3Q7Z407 3707 aa4.5□□□□□ -1.69
DDX42-207ENST00000578593 IGLV8-61A0A075B6I0 122 aa4.49□□□□□ -1.69
DDX42-207ENST00000578593 H3BNG1 76 aa4.49□□□□□ -1.69
DDX42-207ENST00000578593 NUPR2A6NF83 97 aa4.49□□□□□ -1.69
DDX42-207ENST00000578593 MMP24-AS1A0A0U1RRL7 71 aa4.47□□□□□ -1.69
DDX42-207ENST00000578593 K7ERS5 55 aa4.47□□□□□ -1.69
DDX42-207ENST00000578593 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
DDX42-207ENST00000578593 Q5W150 140 aa4.47□□□□□ -1.69
DDX42-207ENST00000578593 LINC00304Q8N9R0 145 aa4.47□□□□□ -1.69
DDX42-207ENST00000578593 A0A087WTM6 91 aa4.47□□□□□ -1.69
DDX42-207ENST00000578593 FAM229AH3BQW9 127 aa4.47□□□□□ -1.69
DDX42-207ENST00000578593 SPINT4Q6UDR6 99 aa4.46□□□□□ -1.69
DDX42-207ENST00000578593 ACYP2P14621 99 aa4.46□□□□□ -1.7
DDX42-207ENST00000578593 CMYA5Q8N3K9 4069 aa4.46□□□□□ -1.7
DDX42-207ENST00000578593 A0A096LNI7 61 aa4.44□□□□□ -1.7
DDX42-207ENST00000578593 DNAH10Q8IVF4 4471 aa4.43□□□□□ -1.7
DDX42-207ENST00000578593 IGLV7-43P04211 117 aa4.43□□□□□ -1.7
DDX42-207ENST00000578593 CRIPTQ9P021 101 aa4.42□□□□□ -1.7
DDX42-207ENST00000578593 LYSTQ99698 3801 aa4.41□□□□□ -1.7
DDX42-207ENST00000578593 DNAH3Q8TD57 4116 aa4.41□□□□□ -1.7
DDX42-207ENST00000578593 KRTAP11-1Q8IUC1 163 aa4.41□□□□□ -1.7
DDX42-207ENST00000578593 PRKDCP78527 4128 aaKnown RBP4.4□□□□□ -1.7
DDX42-207ENST00000578593 COL7A1Q02388 2944 aa4.4□□□□□ -1.7
DDX42-207ENST00000578593 SPRR1BP22528 89 aa4.4□□□□□ -1.71
DDX42-207ENST00000578593 Q96NJ1 140 aa4.39□□□□□ -1.71
DDX42-207ENST00000578593 CIRBP-AS1Q8TBR5 109 aa4.39□□□□□ -1.71
DDX42-207ENST00000578593 DNAH9Q9NYC9 4486 aa4.38□□□□□ -1.71
DDX42-207ENST00000578593 SSBP3-AS1Q7Z2R9 100 aa4.38□□□□□ -1.71
DDX42-207ENST00000578593 ANAPC11Q9NYG5 84 aa4.38□□□□□ -1.71
DDX42-207ENST00000578593 FLG2Q5D862 2391 aaPredicted RBP4.36□□□□□ -1.71
DDX42-207ENST00000578593 K7EIL1 84 aa4.35□□□□□ -1.71
DDX42-207ENST00000578593 MRPL34Q9BQ48 92 aaKnown RBP4.34□□□□□ -1.71
DDX42-207ENST00000578593 A0A1B0GVX0 72 aa4.34□□□□□ -1.72
DDX42-207ENST00000578593 KRTAP10-11P60412 298 aa4.34□□□□□ -1.72
DDX42-207ENST00000578593 HUWE1Q7Z6Z7 4374 aaKnown RBP4.32□□□□□ -1.72
DDX42-207ENST00000578593 KMT2CQ8NEZ4 4911 aaKnown RBP4.31□□□□□ -1.72
DDX42-207ENST00000578593 NBDYA0A0U1RRE5 68 aa4.31□□□□□ -1.72
DDX42-207ENST00000578593 DNAH7Q8WXX0 4024 aa4.3□□□□□ -1.72
DDX42-207ENST00000578593 H0YAA0 97 aa4.3□□□□□ -1.72
DDX42-207ENST00000578593 KRTAP1-5Q9BYS1 174 aa4.3□□□□□ -1.72
DDX42-207ENST00000578593 PSORS1C2Q9UIG4 136 aa4.29□□□□□ -1.72
DDX42-207ENST00000578593 CAMK2N1Q7Z7J9 78 aa4.28□□□□□ -1.72
DDX42-207ENST00000578593 KRTAP13-1Q8IUC0 172 aa4.28□□□□□ -1.72
DDX42-207ENST00000578593 RYR3Q15413 4870 aa4.28□□□□□ -1.72
DDX42-207ENST00000578593 KRTAP13-3Q3SY46 172 aa4.28□□□□□ -1.72
DDX42-207ENST00000578593 PANO1I0J062 215 aa4.28□□□□□ -1.72
DDX42-207ENST00000578593 TPRXLQ17RH7 258 aa4.26□□□□□ -1.73
DDX42-207ENST00000578593 LY6G6CO95867 125 aa4.26□□□□□ -1.73
DDX42-207ENST00000578593 Q6ZSA8 131 aa4.25□□□□□ -1.73
DDX42-207ENST00000578593 SPINK6Q6UWN8 80 aa4.25□□□□□ -1.73
DDX42-207ENST00000578593 STAB2Q8WWQ8 2551 aa4.23□□□□□ -1.73
DDX42-207ENST00000578593 WWC2-AS2Q96NR7 200 aa4.23□□□□□ -1.73
DDX42-207ENST00000578593 DYNC2H1Q8NCM8 4307 aaKnown RBP4.22□□□□□ -1.73
DDX42-207ENST00000578593 FRAS1Q86XX4 4008 aa4.22□□□□□ -1.73
DDX42-207ENST00000578593 DNAH8Q96JB1 4490 aa4.21□□□□□ -1.74
DDX42-207ENST00000578593 C14orf177Q52M58 125 aa4.21□□□□□ -1.74
DDX42-207ENST00000578593 PLECQ15149 4684 aaKnown RBP4.19□□□□□ -1.74
DDX42-207ENST00000578593 HECTD4Q9Y4D8 3996 aa4.18□□□□□ -1.74
DDX42-207ENST00000578593 UBE2DNLQ8IWF7 75 aa4.17□□□□□ -1.74
DDX42-207ENST00000578593 IGKV2-30P06310 120 aa4.16□□□□□ -1.74
DDX42-207ENST00000578593 SPACA4Q8TDM5 124 aa4.16□□□□□ -1.74
DDX42-207ENST00000578593 EPPK1P58107 5090 aaKnown RBP4.15□□□□□ -1.74
DDX42-207ENST00000578593 C10orf95Q9H7T3 257 aa4.15□□□□□ -1.75
DDX42-207ENST00000578593 A0A1B0GU33 70 aa4.14□□□□□ -1.75
DDX42-207ENST00000578593 COX6B2Q6YFQ2 88 aa4.14□□□□□ -1.75
DDX42-207ENST00000578593 DNAH17Q9UFH2 4485 aa4.13□□□□□ -1.75
DDX42-207ENST00000578593 IGKV2D-30A0A075B6S6 120 aa4.11□□□□□ -1.75
DDX42-207ENST00000578593 DNAH2Q9P225 4427 aa4.11□□□□□ -1.75
DDX42-207ENST00000578593 STARD9Q9P2P6 4700 aa4.11□□□□□ -1.75
DDX42-207ENST00000578593 BIRC6Q9NR09 4857 aa4.11□□□□□ -1.75
DDX42-207ENST00000578593 VPS13DQ5THJ4 4388 aa4.11□□□□□ -1.75
DDX42-207ENST00000578593 APLNQ9ULZ1 77 aa4.11□□□□□ -1.75
DDX42-207ENST00000578593 RYR2Q92736 4967 aa4.1□□□□□ -1.75
DDX42-207ENST00000578593 SPINK1P00995 79 aa4.1□□□□□ -1.75
DDX42-207ENST00000578593 H1FX-AS1Q4G0G2 97 aa4.1□□□□□ -1.75
DDX42-207ENST00000578593 Q6ZRN7 208 aaPredicted RBP4.1□□□□□ -1.75
DDX42-207ENST00000578593 KRTAP3-3Q9BYR6 98 aa4.1□□□□□ -1.75
DDX42-207ENST00000578593 KRTAP3-2Q9BYR7 98 aa4.1□□□□□ -1.75
DDX42-207ENST00000578593 SACSQ9NZJ4 4579 aa4.08□□□□□ -1.76
DDX42-207ENST00000578593 KRTAP17-1Q9BYP8 105 aa4.08□□□□□ -1.76
DDX42-207ENST00000578593 KMT2AQ03164 3969 aa4.07□□□□□ -1.76
DDX42-207ENST00000578593 TYMSOSQ8TAI1 123 aa4.07□□□□□ -1.76
DDX42-207ENST00000578593 Q8N1X5 172 aa4.05□□□□□ -1.76
DDX42-207ENST00000578593 DNAH6Q9C0G6 4158 aa4.04□□□□□ -1.76
DDX42-207ENST00000578593 DNAH11Q96DT5 4516 aa4.02□□□□□ -1.77
DDX42-207ENST00000578593 HYDINQ4G0P3 5121 aa4.01□□□□□ -1.77
DDX42-207ENST00000578593 DNAH5Q8TE73 4624 aa4□□□□□ -1.77
DDX42-207ENST00000578593 KRTAP13-2Q52LG2 175 aa3.99□□□□□ -1.77
DDX42-207ENST00000578593 RPL37P61927 97 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms