RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 MT1HL1P0DM35 61 aa3.81□□□□□ -1.8
CTDNEP1-204ENST00000570484 ACYP1P07311 99 aa3.79□□□□□ -1.8
CTDNEP1-204ENST00000570484 UBL5Q9BZL1 73 aa3.79□□□□□ -1.8
CTDNEP1-204ENST00000570484 FAM240AA0A1B0GVK7 77 aa3.78□□□□□ -1.8
CTDNEP1-204ENST00000570484 K7ERU9 68 aa3.78□□□□□ -1.8
CTDNEP1-204ENST00000570484 NREPQ16612 68 aa3.78□□□□□ -1.8
CTDNEP1-204ENST00000570484 Q5XG85 94 aa3.78□□□□□ -1.8
CTDNEP1-204ENST00000570484 SIGMAR1Q99720 223 aa3.78□□□□□ -1.8
CTDNEP1-204ENST00000570484 PKHD1L1Q86WI1 4243 aa3.77□□□□□ -1.81
CTDNEP1-204ENST00000570484 ASB16-AS1Q495Z4 193 aa3.76□□□□□ -1.81
CTDNEP1-204ENST00000570484 RETNLBQ9BQ08 111 aa3.76□□□□□ -1.81
CTDNEP1-204ENST00000570484 ABCA13Q86UQ4 5058 aa3.75□□□□□ -1.81
CTDNEP1-204ENST00000570484 FLG2Q5D862 2391 aaPredicted RBP3.75□□□□□ -1.81
CTDNEP1-204ENST00000570484 J3KT08 172 aa3.75□□□□□ -1.81
CTDNEP1-204ENST00000570484 PRR4Q16378 134 aa3.75□□□□□ -1.81
CTDNEP1-204ENST00000570484 Q6ZVQ6 151 aa3.75□□□□□ -1.81
CTDNEP1-204ENST00000570484 FP248Q71RG6 208 aaPredicted RBP3.75□□□□□ -1.81
CTDNEP1-204ENST00000570484 LINC00846Q9NV44 126 aa3.75□□□□□ -1.81
CTDNEP1-204ENST00000570484 MYCBP2O75592 4640 aa3.74□□□□□ -1.81
CTDNEP1-204ENST00000570484 BPY2O14599 106 aa3.74□□□□□ -1.81
CTDNEP1-204ENST00000570484 IGKV4-1P06312 121 aa3.74□□□□□ -1.81
CTDNEP1-204ENST00000570484 C1orf195Q5TG92 126 aa3.74□□□□□ -1.81
CTDNEP1-204ENST00000570484 NDUFB1O75438 58 aa3.73□□□□□ -1.81
CTDNEP1-204ENST00000570484 PCP4P48539 62 aa3.73□□□□□ -1.81
CTDNEP1-204ENST00000570484 DEFB116Q30KQ4 102 aa3.73□□□□□ -1.81
CTDNEP1-204ENST00000570484 ATP5EP2Q5VTU8 51 aa3.73□□□□□ -1.81
CTDNEP1-204ENST00000570484 LINC00472Q9H8W2 130 aa3.72□□□□□ -1.81
CTDNEP1-204ENST00000570484 LRP1Q07954 4544 aaKnown RBP3.71□□□□□ -1.82
CTDNEP1-204ENST00000570484 IGLV7-46A0A075B6I9 117 aa3.71□□□□□ -1.82
CTDNEP1-204ENST00000570484 Q96NJ1 140 aa3.71□□□□□ -1.82
CTDNEP1-204ENST00000570484 FAT3Q8TDW7 4589 aa3.7□□□□□ -1.82
CTDNEP1-204ENST00000570484 IGHV6-1A0A0B4J1U7 121 aa3.7□□□□□ -1.82
CTDNEP1-204ENST00000570484 A8MWP4 228 aa3.7□□□□□ -1.82
CTDNEP1-204ENST00000570484 LINC00643Q86TS7 51 aa3.7□□□□□ -1.82
CTDNEP1-204ENST00000570484 PCLOQ9Y6V0 5065 aa3.69□□□□□ -1.82
CTDNEP1-204ENST00000570484 DMBT1Q9UGM3 2413 aaPredicted RBP3.69□□□□□ -1.82
CTDNEP1-204ENST00000570484 A0A1B0GVX0 72 aa3.69□□□□□ -1.82
CTDNEP1-204ENST00000570484 CXCL6P80162 114 aa3.69□□□□□ -1.82
CTDNEP1-204ENST00000570484 IGKV3D-7A0A0C4DH55 119 aa3.68□□□□□ -1.82
CTDNEP1-204ENST00000570484 C8orf87E5RJ46 101 aa3.68□□□□□ -1.82
CTDNEP1-204ENST00000570484 K7EQZ3 153 aa3.68□□□□□ -1.82
CTDNEP1-204ENST00000570484 C9orf92A6NGG3 77 aa3.67□□□□□ -1.82
CTDNEP1-204ENST00000570484 HIST1H4AP62805 103 aaKnown RBP3.67□□□□□ -1.82
CTDNEP1-204ENST00000570484 TPRXLQ17RH7 258 aa3.67□□□□□ -1.82
CTDNEP1-204ENST00000570484 PRR15Q8IV56 129 aa3.67□□□□□ -1.82
CTDNEP1-204ENST00000570484 Q8N9L7 120 aa3.67□□□□□ -1.82
CTDNEP1-204ENST00000570484 MPLKIPQ8TAP9 179 aa3.67□□□□□ -1.82
CTDNEP1-204ENST00000570484 TNXBP22105 4242 aa3.66□□□□□ -1.82
CTDNEP1-204ENST00000570484 DSCR10P59022 87 aa3.66□□□□□ -1.82
CTDNEP1-204ENST00000570484 LINC00313P59037 77 aa3.65□□□□□ -1.83
CTDNEP1-204ENST00000570484 C8orf17Q9NRJ1 99 aa3.65□□□□□ -1.83
CTDNEP1-204ENST00000570484 HCG22E2RYF7 251 aa3.64□□□□□ -1.83
CTDNEP1-204ENST00000570484 KRTAP13-3Q3SY46 172 aa3.64□□□□□ -1.83
CTDNEP1-204ENST00000570484 MMP24-AS1A0A0U1RRL7 71 aa3.63□□□□□ -1.83
CTDNEP1-204ENST00000570484 hDV103S1A0JD37 113 aa3.63□□□□□ -1.83
CTDNEP1-204ENST00000570484 CASC2Q6XLA1 102 aa3.63□□□□□ -1.83
CTDNEP1-204ENST00000570484 WFDC13Q8IUB5 93 aa3.63□□□□□ -1.83
CTDNEP1-204ENST00000570484 NDUFS5O43920 106 aa3.62□□□□□ -1.83
CTDNEP1-204ENST00000570484 TMEM254Q8TBM7 123 aa3.62□□□□□ -1.83
CTDNEP1-204ENST00000570484 MT-ATP8P03928 68 aa3.61□□□□□ -1.83
CTDNEP1-204ENST00000570484 IMUPQ9GZP8 106 aa3.61□□□□□ -1.83
CTDNEP1-204ENST00000570484 A0A087WVE0 104 aa3.6□□□□□ -1.83
CTDNEP1-204ENST00000570484 A0A0A0MQY5 61 aa3.6□□□□□ -1.83
CTDNEP1-204ENST00000570484 NOTCH2NLQ7Z3S9 236 aa3.6□□□□□ -1.83
CTDNEP1-204ENST00000570484 MRPL34Q9BQ48 92 aaKnown RBP3.6□□□□□ -1.83
CTDNEP1-204ENST00000570484 SCGB1A1P11684 91 aa3.59□□□□□ -1.83
CTDNEP1-204ENST00000570484 ATP11AUNQ6ZP68 121 aa3.58□□□□□ -1.84
CTDNEP1-204ENST00000570484 Q75L30 129 aa3.58□□□□□ -1.84
CTDNEP1-204ENST00000570484 FAM236AA0A1B0GUQ0 79 aa3.57□□□□□ -1.84
CTDNEP1-204ENST00000570484 FAM236BA0A1B0GV22 79 aa3.57□□□□□ -1.84
CTDNEP1-204ENST00000570484 KRTAP16-1A8MUX0 517 aa3.57□□□□□ -1.84
CTDNEP1-204ENST00000570484 SEC61BP60468 96 aaKnown RBP3.57□□□□□ -1.84
CTDNEP1-204ENST00000570484 RPL37P61927 97 aaKnown RBP3.57□□□□□ -1.84
CTDNEP1-204ENST00000570484 C20orf166-AS1Q96NR2 134 aa3.57□□□□□ -1.84
CTDNEP1-204ENST00000570484 A8MUU9 505 aa3.56□□□□□ -1.84
CTDNEP1-204ENST00000570484 Q8N9P0 234 aaPredicted RBP3.56□□□□□ -1.84
CTDNEP1-204ENST00000570484 TP53AIP1Q9HCN2 124 aa3.55□□□□□ -1.84
CTDNEP1-204ENST00000570484 ZCCHC13Q8WW36 166 aaKnown RBP3.54□□□□□ -1.84
CTDNEP1-204ENST00000570484 HERC1Q15751 4861 aa3.54□□□□□ -1.84
CTDNEP1-204ENST00000570484 ATOX1O00244 68 aa3.53□□□□□ -1.84
CTDNEP1-204ENST00000570484 PCOTHQ58A44 107 aa3.53□□□□□ -1.84
CTDNEP1-204ENST00000570484 SMIM20Q8N5G0 67 aa3.53□□□□□ -1.84
CTDNEP1-204ENST00000570484 TRAV22A0A0B4J277 110 aa3.52□□□□□ -1.85
CTDNEP1-204ENST00000570484 UQCRQO14949 82 aa3.52□□□□□ -1.85
CTDNEP1-204ENST00000570484 HMCN2Q8NDA2 5059 aa3.51□□□□□ -1.85
CTDNEP1-204ENST00000570484 MP68P56378 58 aa3.5□□□□□ -1.85
CTDNEP1-204ENST00000570484 H0Y9P7 68 aa3.49□□□□□ -1.85
CTDNEP1-204ENST00000570484 IGKV2-30P06310 120 aa3.49□□□□□ -1.85
CTDNEP1-204ENST00000570484 IGKV2D-30A0A075B6S6 120 aa3.48□□□□□ -1.85
CTDNEP1-204ENST00000570484 TRAV7A0A075B6U4 112 aa3.48□□□□□ -1.85
CTDNEP1-204ENST00000570484 C7orf65Q6ZTY9 151 aa3.48□□□□□ -1.85
CTDNEP1-204ENST00000570484 OCR1Q9BZK8 76 aa3.48□□□□□ -1.85
CTDNEP1-204ENST00000570484 LOC101927531A0A1B0GV80 90 aa3.47□□□□□ -1.85
CTDNEP1-204ENST00000570484 C5orf47Q569G3 176 aa3.47□□□□□ -1.85
CTDNEP1-204ENST00000570484 LCE1AQ5T7P2 110 aa3.47□□□□□ -1.85
CTDNEP1-204ENST00000570484 Q5W150 140 aa3.47□□□□□ -1.85
CTDNEP1-204ENST00000570484 LPAP08519 4548 aa3.46□□□□□ -1.86
CTDNEP1-204ENST00000570484 SERP2Q8N6R1 65 aa3.46□□□□□ -1.86
CTDNEP1-204ENST00000570484 ANAPC13Q9BS18 74 aa3.46□□□□□ -1.86
CTDNEP1-204ENST00000570484 H3BPC8 53 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 160.4 ms