RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 BPY2O14599 106 aa6.44□□□□□ -1.38
CDH3-208ENST00000569036 UNQ6190/PRO20217Q6UXQ8 127 aa6.44□□□□□ -1.38
CDH3-208ENST00000569036 Q8NDZ9 215 aa6.44□□□□□ -1.38
CDH3-208ENST00000569036 VPREB1P12018 145 aa6.43□□□□□ -1.38
CDH3-208ENST00000569036 SEC61BP60468 96 aaKnown RBP6.43□□□□□ -1.38
CDH3-208ENST00000569036 PRYO14603 147 aa6.42□□□□□ -1.38
CDH3-208ENST00000569036 OCR1Q9BZK8 76 aa6.42□□□□□ -1.38
CDH3-208ENST00000569036 C6orf48Q9UBA6 75 aa6.41□□□□□ -1.38
CDH3-208ENST00000569036 IGLV5-48A0A075B6I7 105 aa6.4□□□□□ -1.38
CDH3-208ENST00000569036 IGKV4-1P06312 121 aa6.4□□□□□ -1.38
CDH3-208ENST00000569036 C10orf25Q5T742 122 aa6.4□□□□□ -1.38
CDH3-208ENST00000569036 FAM168BA1KXE4 195 aa6.39□□□□□ -1.39
CDH3-208ENST00000569036 KRTAP13-3Q3SY46 172 aa6.39□□□□□ -1.39
CDH3-208ENST00000569036 FP248Q71RG6 208 aaPredicted RBP6.39□□□□□ -1.39
CDH3-208ENST00000569036 LINC00304Q8N9R0 145 aa6.39□□□□□ -1.39
CDH3-208ENST00000569036 DHRS4-AS1Q9P1J3 65 aa6.39□□□□□ -1.39
CDH3-208ENST00000569036 SNURFQ9Y675 71 aa6.39□□□□□ -1.39
CDH3-208ENST00000569036 CAMK2N2Q96S95 79 aa6.38□□□□□ -1.39
CDH3-208ENST00000569036 FLGP20930 4061 aaPredicted RBP6.38□□□□□ -1.39
CDH3-208ENST00000569036 ZNF861PO60384 105 aa6.37□□□□□ -1.39
CDH3-208ENST00000569036 KRTAP13-2Q52LG2 175 aa6.37□□□□□ -1.39
CDH3-208ENST00000569036 KCNQ1DNQ9H478 68 aa6.37□□□□□ -1.39
CDH3-208ENST00000569036 IGLV5-37A0A075B6J1 123 aa6.35□□□□□ -1.39
CDH3-208ENST00000569036 M0R2T5 61 aa6.35□□□□□ -1.39
CDH3-208ENST00000569036 TLX1NBP0CAT3 122 aa6.35□□□□□ -1.39
CDH3-208ENST00000569036 UBE2BP63146 152 aa6.35□□□□□ -1.39
CDH3-208ENST00000569036 NDUFB1O75438 58 aa6.34□□□□□ -1.39
CDH3-208ENST00000569036 KRTAP7-1Q8IUC3 87 aa6.33□□□□□ -1.4
CDH3-208ENST00000569036 ANAPC11Q9NYG5 84 aa6.33□□□□□ -1.4
CDH3-208ENST00000569036 NKAPP1Q8N9T2 125 aa6.32□□□□□ -1.4
CDH3-208ENST00000569036 Q8NBF4 154 aa6.32□□□□□ -1.4
CDH3-208ENST00000569036 SPRR4Q96PI1 79 aa6.32□□□□□ -1.4
CDH3-208ENST00000569036 XAGE1AQ9HD64 81 aa6.32□□□□□ -1.4
CDH3-208ENST00000569036 V9GYY9 64 aa6.32□□□□□ -1.4
CDH3-208ENST00000569036 CYP4F30PQ9H0H9 118 aa6.31□□□□□ -1.4
CDH3-208ENST00000569036 SPRR1AP35321 89 aa6.3□□□□□ -1.4
CDH3-208ENST00000569036 Q1T7F1 81 aa6.3□□□□□ -1.4
CDH3-208ENST00000569036 KRTAP19-1Q8IUB9 90 aa6.3□□□□□ -1.4
CDH3-208ENST00000569036 ZCCHC13Q8WW36 166 aaKnown RBP6.3□□□□□ -1.4
CDH3-208ENST00000569036 ETDCA0A1B0GVM5 59 aa6.29□□□□□ -1.4
CDH3-208ENST00000569036 hDV103S1A0JD37 113 aa6.29□□□□□ -1.4
CDH3-208ENST00000569036 H3BPC8 53 aa6.29□□□□□ -1.4
CDH3-208ENST00000569036 Q6ZRX8 168 aa6.29□□□□□ -1.4
CDH3-208ENST00000569036 KRTAP4-16G5E9R7 235 aaPredicted RBP6.28□□□□□ -1.4
CDH3-208ENST00000569036 Q8N377 158 aa6.28□□□□□ -1.4
CDH3-208ENST00000569036 RPL37AP8A6NKH3 93 aa6.27□□□□□ -1.41
CDH3-208ENST00000569036 PRR15Q8IV56 129 aa6.27□□□□□ -1.41
CDH3-208ENST00000569036 C1orf195Q5TG92 126 aa6.25□□□□□ -1.41
CDH3-208ENST00000569036 BRK1Q8WUW1 75 aa6.25□□□□□ -1.41
CDH3-208ENST00000569036 A0A1W2PNM2 257 aa6.24□□□□□ -1.41
CDH3-208ENST00000569036 FAM229BQ4G0N7 80 aa6.24□□□□□ -1.41
CDH3-208ENST00000569036 XP32Q5T750 250 aa6.24□□□□□ -1.41
CDH3-208ENST00000569036 SMIM29Q86T20 159 aa6.24□□□□□ -1.41
CDH3-208ENST00000569036 HIGD2AQ9BW72 106 aa6.24□□□□□ -1.41
CDH3-208ENST00000569036 IGLV8-61A0A075B6I0 122 aa6.23□□□□□ -1.41
CDH3-208ENST00000569036 SPANXA2-OT1Q8N9U9 137 aa6.23□□□□□ -1.41
CDH3-208ENST00000569036 NEBP20929 6669 aa6.22□□□□□ -1.41
CDH3-208ENST00000569036 HCG22E2RYF7 251 aa6.22□□□□□ -1.41
CDH3-208ENST00000569036 MP68P56378 58 aa6.22□□□□□ -1.41
CDH3-208ENST00000569036 Q8N9L7 120 aa6.22□□□□□ -1.41
CDH3-208ENST00000569036 DSCR10P59022 87 aa6.2□□□□□ -1.42
CDH3-208ENST00000569036 KRTAP6-3Q3LI67 103 aa6.2□□□□□ -1.42
CDH3-208ENST00000569036 MRPL55Q7Z7F7 128 aaKnown RBP6.2□□□□□ -1.42
CDH3-208ENST00000569036 C1orf64Q8NEQ6 169 aa6.18□□□□□ -1.42
CDH3-208ENST00000569036 MPLKIPQ8TAP9 179 aa6.18□□□□□ -1.42
CDH3-208ENST00000569036 Q9BRP9 147 aa6.18□□□□□ -1.42
CDH3-208ENST00000569036 SPAG11AQ6PDA7 123 aa6.16□□□□□ -1.42
CDH3-208ENST00000569036 DEFB105AQ8NG35 78 aa6.16□□□□□ -1.42
CDH3-208ENST00000569036 LIMD2Q9BT23 127 aa6.16□□□□□ -1.42
CDH3-208ENST00000569036 TRAV22A0A0B4J277 110 aa6.15□□□□□ -1.42
CDH3-208ENST00000569036 K7EQZ3 153 aa6.15□□□□□ -1.42
CDH3-208ENST00000569036 PCOTHQ58A44 107 aa6.15□□□□□ -1.42
CDH3-208ENST00000569036 COX6B2Q6YFQ2 88 aa6.14□□□□□ -1.43
CDH3-208ENST00000569036 SPRR1BP22528 89 aa6.13□□□□□ -1.43
CDH3-208ENST00000569036 KRTAP13-1Q8IUC0 172 aa6.13□□□□□ -1.43
CDH3-208ENST00000569036 KRTAP20-1Q3LI63 56 aa6.12□□□□□ -1.43
CDH3-208ENST00000569036 UBE2AP49459 152 aa6.1□□□□□ -1.43
CDH3-208ENST00000569036 PMAIP1Q13794 54 aa6.1□□□□□ -1.43
CDH3-208ENST00000569036 LCE2BO14633 110 aa6.09□□□□□ -1.43
CDH3-208ENST00000569036 IGFL1Q6UW32 110 aa6.09□□□□□ -1.43
CDH3-208ENST00000569036 KRTAP9-8Q9BYQ0 159 aa6.09□□□□□ -1.43
CDH3-208ENST00000569036 SEC61GP60059 68 aa6.08□□□□□ -1.44
CDH3-208ENST00000569036 C4orf48Q5BLP8 95 aa6.08□□□□□ -1.44
CDH3-208ENST00000569036 ST20-AS1Q8NBB2 130 aa6.08□□□□□ -1.44
CDH3-208ENST00000569036 LINC00208Q96KT6 92 aa6.08□□□□□ -1.44
CDH3-208ENST00000569036 A8MWP4 228 aa6.07□□□□□ -1.44
CDH3-208ENST00000569036 TP53AIP1Q9HCN2 124 aa6.07□□□□□ -1.44
CDH3-208ENST00000569036 H0Y9P7 68 aa6.06□□□□□ -1.44
CDH3-208ENST00000569036 CASC2Q6XLA1 102 aa6.06□□□□□ -1.44
CDH3-208ENST00000569036 MUC12Q9UKN1 5478 aa6.06□□□□□ -1.44
CDH3-208ENST00000569036 LOC101927531A0A1B0GV80 90 aa6.05□□□□□ -1.44
CDH3-208ENST00000569036 A0A087WSZ3 146 aa6.04□□□□□ -1.44
CDH3-208ENST00000569036 Q75L30 129 aa6.04□□□□□ -1.44
CDH3-208ENST00000569036 MOBPQ13875 183 aa6.03□□□□□ -1.44
CDH3-208ENST00000569036 Q5VV11 94 aa6.03□□□□□ -1.44
CDH3-208ENST00000569036 SPINK1P00995 79 aa6.02□□□□□ -1.45
CDH3-208ENST00000569036 CD164Q04900 197 aa6.02□□□□□ -1.45
CDH3-208ENST00000569036 Q8N9P0 234 aaPredicted RBP6.02□□□□□ -1.45
CDH3-208ENST00000569036 LINC00472Q9H8W2 130 aa6.02□□□□□ -1.45
CDH3-208ENST00000569036 ATP11AUNQ6ZP68 121 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms