RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 DNAH7Q8WXX0 4024 aa1.65□□□□□ -2.14
HERPUD1-212ENST00000567944 TNCP24821 2201 aa1.65□□□□□ -2.15
HERPUD1-212ENST00000567944 NUPR2A6NF83 97 aa1.65□□□□□ -2.15
HERPUD1-212ENST00000567944 B4DSR2 109 aa1.65□□□□□ -2.15
HERPUD1-212ENST00000567944 NCR3O14931 201 aa1.65□□□□□ -2.15
HERPUD1-212ENST00000567944 TFF1P04155 84 aa1.65□□□□□ -2.15
HERPUD1-212ENST00000567944 IGLV7-43P04211 117 aa1.65□□□□□ -2.15
HERPUD1-212ENST00000567944 PRCDQ00LT1 54 aa1.65□□□□□ -2.15
HERPUD1-212ENST00000567944 HCP5Q6MZN7 132 aa1.65□□□□□ -2.15
HERPUD1-212ENST00000567944 ZNF625Q96I27 306 aaPredicted RBP1.65□□□□□ -2.15
HERPUD1-212ENST00000567944 ODF3BA8MYP8 253 aa1.64□□□□□ -2.15
HERPUD1-212ENST00000567944 DEFA4P12838 97 aa1.64□□□□□ -2.15
HERPUD1-212ENST00000567944 CCL18P55774 89 aa1.64□□□□□ -2.15
HERPUD1-212ENST00000567944 PIGYQ3MUY2 71 aa1.64□□□□□ -2.15
HERPUD1-212ENST00000567944 CSAG1Q6PB30 78 aa1.64□□□□□ -2.15
HERPUD1-212ENST00000567944 Q8NAQ8 132 aa1.64□□□□□ -2.15
HERPUD1-212ENST00000567944 Q8TAT8 98 aa1.64□□□□□ -2.15
HERPUD1-212ENST00000567944 C20orf166-AS1Q96NR2 134 aa1.64□□□□□ -2.15
HERPUD1-212ENST00000567944 KCNQ1DNQ9H478 68 aa1.64□□□□□ -2.15
HERPUD1-212ENST00000567944 HYDINQ4G0P3 5121 aa1.63□□□□□ -2.15
HERPUD1-212ENST00000567944 DSCAML1Q8TD84 2053 aa1.63□□□□□ -2.15
HERPUD1-212ENST00000567944 LYSTQ99698 3801 aa1.63□□□□□ -2.15
HERPUD1-212ENST00000567944 HUWE1Q7Z6Z7 4374 aaKnown RBP1.63□□□□□ -2.15
HERPUD1-212ENST00000567944 C17orf98A8MV24 154 aa1.63□□□□□ -2.15
HERPUD1-212ENST00000567944 HRES1P13985 223 aa1.63□□□□□ -2.15
HERPUD1-212ENST00000567944 COX7BP24311 80 aa1.63□□□□□ -2.15
HERPUD1-212ENST00000567944 RPS27P42677 84 aaKnown RBP1.63□□□□□ -2.15
HERPUD1-212ENST00000567944 KRTAP25-1Q3LHN0 102 aa1.63□□□□□ -2.15
HERPUD1-212ENST00000567944 SPATA8Q6RVD6 105 aa1.63□□□□□ -2.15
HERPUD1-212ENST00000567944 COA5Q86WW8 74 aa1.63□□□□□ -2.15
HERPUD1-212ENST00000567944 FRAS1Q86XX4 4008 aa1.63□□□□□ -2.15
HERPUD1-212ENST00000567944 HERC2O95714 4834 aa1.63□□□□□ -2.15
HERPUD1-212ENST00000567944 PCLOQ9Y6V0 5065 aa1.63□□□□□ -2.15
HERPUD1-212ENST00000567944 A0A1W2PNM2 257 aa1.62□□□□□ -2.15
HERPUD1-212ENST00000567944 CCL3L1P16619 93 aa1.62□□□□□ -2.15
HERPUD1-212ENST00000567944 PLAC8Q9NZF1 115 aa1.62□□□□□ -2.15
HERPUD1-212ENST00000567944 CSMD3Q7Z407 3707 aa1.62□□□□□ -2.15
HERPUD1-212ENST00000567944 IGKV1D-37A0A075B6S9 117 aa1.61□□□□□ -2.15
HERPUD1-212ENST00000567944 IGKV2-29A2NJV5 120 aaPredicted RBP1.61□□□□□ -2.15
HERPUD1-212ENST00000567944 IGLV6-57P01721 117 aa1.61□□□□□ -2.15
HERPUD1-212ENST00000567944 RNASE3P12724 160 aaKnown RBP1.61□□□□□ -2.15
HERPUD1-212ENST00000567944 POLR2KP53803 58 aaKnown RBP1.61□□□□□ -2.15
HERPUD1-212ENST00000567944 DEFB134Q4QY38 66 aa1.61□□□□□ -2.15
HERPUD1-212ENST00000567944 SPINK9Q5DT21 86 aa1.61□□□□□ -2.15
HERPUD1-212ENST00000567944 SMIM11BQ8TCY0 68 aa1.61□□□□□ -2.15
HERPUD1-212ENST00000567944 R4GN34 69 aa1.61□□□□□ -2.15
HERPUD1-212ENST00000567944 IGKV1OR2-108A0A075B7D4 117 aa1.6□□□□□ -2.15
HERPUD1-212ENST00000567944 DEFB131BA0A096LNP1 70 aa1.6□□□□□ -2.15
HERPUD1-212ENST00000567944 A0A1B0GU69 56 aa1.6□□□□□ -2.15
HERPUD1-212ENST00000567944 TRBV6-4A0A1B0GX49 114 aa1.6□□□□□ -2.15
HERPUD1-212ENST00000567944 CLPSL1A2RUU4 121 aa1.6□□□□□ -2.15
HERPUD1-212ENST00000567944 CRIP1P50238 77 aa1.6□□□□□ -2.15
HERPUD1-212ENST00000567944 TRGV1A0A0A0MS02 117 aa1.59□□□□□ -2.15
HERPUD1-212ENST00000567944 H3BRN7 92 aa1.59□□□□□ -2.15
HERPUD1-212ENST00000567944 LINC00158P58513 81 aa1.59□□□□□ -2.15
HERPUD1-212ENST00000567944 KRTAP26-1Q6PEX3 210 aa1.59□□□□□ -2.15
HERPUD1-212ENST00000567944 SPRR4Q96PI1 79 aa1.59□□□□□ -2.15
HERPUD1-212ENST00000567944 TP53AIP1Q9HCN2 124 aa1.59□□□□□ -2.15
HERPUD1-212ENST00000567944 MINOS1-NBL1R4GNA1 71 aa1.59□□□□□ -2.15
HERPUD1-212ENST00000567944 KIAA1109Q2LD37 5005 aa1.59□□□□□ -2.16
HERPUD1-212ENST00000567944 STARD9Q9P2P6 4700 aa1.59□□□□□ -2.16
HERPUD1-212ENST00000567944 PLECQ15149 4684 aaKnown RBP1.58□□□□□ -2.16
HERPUD1-212ENST00000567944 DNAH10Q8IVF4 4471 aa1.58□□□□□ -2.16
HERPUD1-212ENST00000567944 ALMS1Q8TCU4 4167 aa1.58□□□□□ -2.16
HERPUD1-212ENST00000567944 IGKV3-7A0A075B6H7 116 aa1.58□□□□□ -2.16
HERPUD1-212ENST00000567944 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.58□□□□□ -2.16
HERPUD1-212ENST00000567944 A0A1B0GU33 70 aa1.58□□□□□ -2.16
HERPUD1-212ENST00000567944 SPINK7P58062 85 aa1.58□□□□□ -2.16
HERPUD1-212ENST00000567944 Q6ZQY7 126 aa1.58□□□□□ -2.16
HERPUD1-212ENST00000567944 TMEM167AQ8TBQ9 72 aa1.58□□□□□ -2.16
HERPUD1-212ENST00000567944 PKHD1P08F94 4074 aa1.58□□□□□ -2.16
HERPUD1-212ENST00000567944 DNAH6Q9C0G6 4158 aa1.58□□□□□ -2.16
HERPUD1-212ENST00000567944 KMT2AQ03164 3969 aa1.57□□□□□ -2.16
HERPUD1-212ENST00000567944 IGKV2-40A0A087WW87 121 aaPredicted RBP1.57□□□□□ -2.16
HERPUD1-212ENST00000567944 IGKV2D-40P01614 121 aaPredicted RBP1.57□□□□□ -2.16
HERPUD1-212ENST00000567944 ACYP2P14621 99 aa1.57□□□□□ -2.16
HERPUD1-212ENST00000567944 LINC00575Q6W349 94 aa1.57□□□□□ -2.16
HERPUD1-212ENST00000567944 Q6ZTI0 123 aa1.57□□□□□ -2.16
HERPUD1-212ENST00000567944 Q8IZM0 81 aa1.57□□□□□ -2.16
HERPUD1-212ENST00000567944 DMBT1Q9UGM3 2413 aaPredicted RBP1.57□□□□□ -2.16
HERPUD1-212ENST00000567944 HECTD4Q9Y4D8 3996 aa1.56□□□□□ -2.16
HERPUD1-212ENST00000567944 RPL39P62891 51 aaKnown RBP1.56□□□□□ -2.16
HERPUD1-212ENST00000567944 C9orf163Q8N9P6 203 aa1.56□□□□□ -2.16
HERPUD1-212ENST00000567944 RPL39LQ96EH5 51 aaKnown RBP1.56□□□□□ -2.16
HERPUD1-212ENST00000567944 PSORS1C2Q9UIG4 136 aa1.56□□□□□ -2.16
HERPUD1-212ENST00000567944 K7EIL1 84 aa1.55□□□□□ -2.16
HERPUD1-212ENST00000567944 ANGP03950 147 aaKnown RBP1.55□□□□□ -2.16
HERPUD1-212ENST00000567944 DEFB108BQ8NET1 73 aa1.55□□□□□ -2.16
HERPUD1-212ENST00000567944 DNAH17Q9UFH2 4485 aa1.55□□□□□ -2.16
HERPUD1-212ENST00000567944 DYNC1H1Q14204 4646 aaKnown RBP1.55□□□□□ -2.16
HERPUD1-212ENST00000567944 VPS13DQ5THJ4 4388 aa1.54□□□□□ -2.16
HERPUD1-212ENST00000567944 DNAH11Q96DT5 4516 aa1.54□□□□□ -2.16
HERPUD1-212ENST00000567944 IGKV3OR2-268A0A0C4DH90 116 aa1.54□□□□□ -2.16
HERPUD1-212ENST00000567944 LINC00959A0A1B0GUT2 108 aa1.54□□□□□ -2.16
HERPUD1-212ENST00000567944 RPL37AP61513 92 aaKnown RBP1.54□□□□□ -2.16
HERPUD1-212ENST00000567944 CDKN2A-AS1Q9UH64 79 aa1.54□□□□□ -2.16
HERPUD1-212ENST00000567944 HSPG2P98160 4391 aa1.54□□□□□ -2.16
HERPUD1-212ENST00000567944 FAT2Q9NYQ8 4349 aa1.54□□□□□ -2.16
HERPUD1-212ENST00000567944 LYNX1G3V0Z9 82 aa1.53□□□□□ -2.16
HERPUD1-212ENST00000567944 K7EIM0 57 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms