RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 S100A12P80511 92 aa-0.61□□□□□ -2.51
CDH1-211ENST00000567320 MRPS10P82664 201 aaKnown RBP-0.61□□□□□ -2.51
CDH1-211ENST00000567320 WT1-ASQ06250 92 aa-0.61□□□□□ -2.51
CDH1-211ENST00000567320 RPS27LQ71UM5 84 aaKnown RBP-0.61□□□□□ -2.51
CDH1-211ENST00000567320 ASXL1Q8IXJ9 1541 aa-0.61□□□□□ -2.51
CDH1-211ENST00000567320 MAP3K4Q9Y6R4 1608 aa-0.61□□□□□ -2.51
CDH1-211ENST00000567320 ERVK-7P63135 1459 aa-0.61□□□□□ -2.51
CDH1-211ENST00000567320 SPTBN5Q9NRC6 3674 aaKnown RBP-0.61□□□□□ -2.51
CDH1-211ENST00000567320 THOC2Q8NI27 1593 aaKnown RBP-0.62□□□□□ -2.51
CDH1-211ENST00000567320 MGAQ8IWI9 3026 aa-0.62□□□□□ -2.51
CDH1-211ENST00000567320 NHSQ6T4R5 1651 aa-0.62□□□□□ -2.51
CDH1-211ENST00000567320 SMG1Q96Q15 3661 aaKnown RBP-0.62□□□□□ -2.51
CDH1-211ENST00000567320 A0A1B0GUL6 1792 aa-0.62□□□□□ -2.51
CDH1-211ENST00000567320 URB2Q14146 1524 aaKnown RBP-0.62□□□□□ -2.51
CDH1-211ENST00000567320 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.62□□□□□ -2.51
CDH1-211ENST00000567320 MYMXA0A1B0GTQ4 84 aa-0.62□□□□□ -2.51
CDH1-211ENST00000567320 C20orf202A1L168 122 aa-0.62□□□□□ -2.51
CDH1-211ENST00000567320 DEFB4AO15263 64 aa-0.62□□□□□ -2.51
CDH1-211ENST00000567320 C14orf144Q96I85 54 aa-0.62□□□□□ -2.51
CDH1-211ENST00000567320 CCNB3Q8WWL7 1395 aa-0.62□□□□□ -2.51
CDH1-211ENST00000567320 CCDC88BA6NC98 1476 aa-0.62□□□□□ -2.51
CDH1-211ENST00000567320 INO80Q9ULG1 1556 aaPredicted RBP-0.62□□□□□ -2.51
CDH1-211ENST00000567320 ITPR1Q14643 2758 aa-0.62□□□□□ -2.51
CDH1-211ENST00000567320 KIF14Q15058 1648 aa-0.63□□□□□ -2.51
CDH1-211ENST00000567320 CYB5AP00167 134 aa-0.63□□□□□ -2.51
CDH1-211ENST00000567320 SFTA3P0C7M3 94 aa-0.63□□□□□ -2.51
CDH1-211ENST00000567320 CRIP1P50238 77 aa-0.63□□□□□ -2.51
CDH1-211ENST00000567320 NREPQ16612 68 aa-0.63□□□□□ -2.51
CDH1-211ENST00000567320 NCMAPQ5T1S8 102 aa-0.63□□□□□ -2.51
CDH1-211ENST00000567320 ARHGAP35Q9NRY4 1499 aa-0.63□□□□□ -2.51
CDH1-211ENST00000567320 MYO5CQ9NQX4 1742 aa-0.64□□□□□ -2.51
CDH1-211ENST00000567320 BPTFQ12830 3046 aa-0.64□□□□□ -2.51
CDH1-211ENST00000567320 PPLO60437 1756 aa-0.64□□□□□ -2.51
CDH1-211ENST00000567320 MED14O60244 1454 aa-0.64□□□□□ -2.51
CDH1-211ENST00000567320 DEFB131BA0A096LNP1 70 aa-0.64□□□□□ -2.51
CDH1-211ENST00000567320 EFCAB10A6NFE3 127 aa-0.64□□□□□ -2.51
CDH1-211ENST00000567320 LINC01546A6NGU7 62 aa-0.64□□□□□ -2.51
CDH1-211ENST00000567320 CEBPZOSA8MTT3 80 aa-0.64□□□□□ -2.51
CDH1-211ENST00000567320 UMAD1C9J7I0 102 aa-0.64□□□□□ -2.51
CDH1-211ENST00000567320 ATP6V1G2-DDX39BF2Z307 99 aa-0.64□□□□□ -2.51
CDH1-211ENST00000567320 PEA15Q15121 130 aa-0.64□□□□□ -2.51
CDH1-211ENST00000567320 DPY30Q9C005 99 aa-0.64□□□□□ -2.51
CDH1-211ENST00000567320 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.64□□□□□ -2.51
CDH1-211ENST00000567320 KDM5DQ9BY66 1539 aa-0.64□□□□□ -2.51
CDH1-211ENST00000567320 CEP295Q9C0D2 2601 aa-0.65□□□□□ -2.51
CDH1-211ENST00000567320 MYO9AB2RTY4 2548 aa-0.65□□□□□ -2.51
CDH1-211ENST00000567320 DIP2AQ14689 1571 aa-0.65□□□□□ -2.51
CDH1-211ENST00000567320 TTC37Q6PGP7 1564 aa-0.65□□□□□ -2.51
CDH1-211ENST00000567320 DNMBPQ6XZF7 1577 aa-0.65□□□□□ -2.51
CDH1-211ENST00000567320 CSMD2Q7Z408 3487 aa-0.65□□□□□ -2.51
CDH1-211ENST00000567320 NDUFB1O75438 58 aa-0.65□□□□□ -2.51
CDH1-211ENST00000567320 HMGA1P17096 107 aaKnown RBP-0.65□□□□□ -2.51
CDH1-211ENST00000567320 IFI27P40305 119 aaPredicted RBP-0.65□□□□□ -2.51
CDH1-211ENST00000567320 RBP2P50120 134 aa-0.65□□□□□ -2.51
CDH1-211ENST00000567320 MINOS1Q5TGZ0 78 aa-0.65□□□□□ -2.51
CDH1-211ENST00000567320 SNHG12Q9BXW3 62 aa-0.65□□□□□ -2.51
CDH1-211ENST00000567320 KCNQ1DNQ9H478 68 aa-0.65□□□□□ -2.51
CDH1-211ENST00000567320 RABAC1Q9UI14 185 aa-0.65□□□□□ -2.51
CDH1-211ENST00000567320 MYO15AQ9UKN7 3530 aa-0.65□□□□□ -2.51
CDH1-211ENST00000567320 HFM1A2PYH4 1435 aa-0.65□□□□□ -2.51
CDH1-211ENST00000567320 C3P01024 1663 aa-0.65□□□□□ -2.51
CDH1-211ENST00000567320 PEG3Q9GZU2 1588 aa-0.66□□□□□ -2.51
CDH1-211ENST00000567320 CD163L1Q9NR16 1453 aa-0.66□□□□□ -2.51
CDH1-211ENST00000567320 KIF21BO75037 1637 aa-0.66□□□□□ -2.51
CDH1-211ENST00000567320 SPTAN1Q13813 2472 aaKnown RBP-0.66□□□□□ -2.51
CDH1-211ENST00000567320 M0QY20 66 aa-0.66□□□□□ -2.52
CDH1-211ENST00000567320 LINC00032P0C843 101 aa-0.66□□□□□ -2.52
CDH1-211ENST00000567320 FCER1GP30273 86 aa-0.66□□□□□ -2.52
CDH1-211ENST00000567320 LINC00643Q86TS7 51 aa-0.66□□□□□ -2.52
CDH1-211ENST00000567320 C6orf48Q9UBA6 75 aa-0.66□□□□□ -2.52
CDH1-211ENST00000567320 ABCC3O15438 1527 aa-0.66□□□□□ -2.52
CDH1-211ENST00000567320 FAM208AQ9UK61 1670 aaKnown RBP-0.66□□□□□ -2.52
CDH1-211ENST00000567320 MROH1Q8NDA8 1641 aa-0.67□□□□□ -2.52
CDH1-211ENST00000567320 ADGRG4Q8IZF6 3080 aa-0.67□□□□□ -2.52
CDH1-211ENST00000567320 LMTK2Q8IWU2 1503 aa-0.67□□□□□ -2.52
CDH1-211ENST00000567320 CROCC2H7BZ55 1655 aa-0.67□□□□□ -2.52
CDH1-211ENST00000567320 GYPAP02724 150 aa-0.67□□□□□ -2.52
CDH1-211ENST00000567320 SNRPFP62306 86 aaKnown RBP-0.67□□□□□ -2.52
CDH1-211ENST00000567320 ACBD7Q8N6N7 88 aa-0.67□□□□□ -2.52
CDH1-211ENST00000567320 DMXL2Q8TDJ6 3036 aa-0.67□□□□□ -2.52
CDH1-211ENST00000567320 TRRAPQ9Y4A5 3859 aa-0.67□□□□□ -2.52
CDH1-211ENST00000567320 LRBAP50851 2863 aa-0.67□□□□□ -2.52
CDH1-211ENST00000567320 RALGAPBQ86X10 1494 aa-0.67□□□□□ -2.52
CDH1-211ENST00000567320 CLASP1Q7Z460 1538 aa-0.68□□□□□ -2.52
CDH1-211ENST00000567320 A8MTW9 85 aa-0.68□□□□□ -2.52
CDH1-211ENST00000567320 M0QZ58 72 aa-0.68□□□□□ -2.52
CDH1-211ENST00000567320 SMIM13P0DJ93 91 aa-0.68□□□□□ -2.52
CDH1-211ENST00000567320 GLI2P10070 1586 aa-0.68□□□□□ -2.52
CDH1-211ENST00000567320 SMIM11AP58511 58 aa-0.68□□□□□ -2.52
CDH1-211ENST00000567320 SARNPP82979 210 aaKnown RBP-0.68□□□□□ -2.52
CDH1-211ENST00000567320 KRTAP19-6Q3LI70 58 aa-0.68□□□□□ -2.52
CDH1-211ENST00000567320 TDRG1Q3Y452 100 aa-0.68□□□□□ -2.52
CDH1-211ENST00000567320 BVES-AS1Q5T3Y7 98 aa-0.68□□□□□ -2.52
CDH1-211ENST00000567320 ATP5EP2Q5VTU8 51 aa-0.68□□□□□ -2.52
CDH1-211ENST00000567320 ENHOQ6UWT2 76 aa-0.68□□□□□ -2.52
CDH1-211ENST00000567320 UBL5Q9BZL1 73 aa-0.68□□□□□ -2.52
CDH1-211ENST00000567320 NOP10Q9NPE3 64 aaKnown RBP-0.68□□□□□ -2.52
CDH1-211ENST00000567320 ABCC6O95255 1503 aa-0.69□□□□□ -2.52
CDH1-211ENST00000567320 TLN1Q9Y490 2541 aaKnown RBP-0.69□□□□□ -2.52
CDH1-211ENST00000567320 CFAP46Q8IYW2 2715 aa-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms