RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 Q96NJ1 140 aa4.08□□□□□ -1.76
SMPD3-206ENST00000566009 TRBV7-6A0A0J9YX20 115 aa4.07□□□□□ -1.76
SMPD3-206ENST00000566009 KRTAP16-1A8MUX0 517 aa4.07□□□□□ -1.76
SMPD3-206ENST00000566009 SPRR1BP22528 89 aa4.07□□□□□ -1.76
SMPD3-206ENST00000566009 PRO0461Q9UI25 63 aa4.07□□□□□ -1.76
SMPD3-206ENST00000566009 SPCS1Q9Y6A9 102 aa4.07□□□□□ -1.76
SMPD3-206ENST00000566009 FABP2P12104 132 aa4.06□□□□□ -1.76
SMPD3-206ENST00000566009 ELOF1P60002 83 aaKnown RBP4.06□□□□□ -1.76
SMPD3-206ENST00000566009 LCE1DQ5T752 114 aa4.06□□□□□ -1.76
SMPD3-206ENST00000566009 DEFB105AQ8NG35 78 aa4.06□□□□□ -1.76
SMPD3-206ENST00000566009 LAMTOR3Q9UHA4 124 aa4.06□□□□□ -1.76
SMPD3-206ENST00000566009 TRAV13-2A0A0B4J235 113 aa4.05□□□□□ -1.76
SMPD3-206ENST00000566009 A8MUU9 505 aa4.05□□□□□ -1.76
SMPD3-206ENST00000566009 A0A0B4J2C4 111 aa4.04□□□□□ -1.76
SMPD3-206ENST00000566009 TEX49A0A1B0GTD5 131 aa4.04□□□□□ -1.76
SMPD3-206ENST00000566009 SMCPP49901 116 aaPredicted RBP4.04□□□□□ -1.76
SMPD3-206ENST00000566009 IGFL1Q6UW32 110 aa4.04□□□□□ -1.76
SMPD3-206ENST00000566009 GTF2H5Q6ZYL4 71 aa4.04□□□□□ -1.76
SMPD3-206ENST00000566009 NOTCH2NLQ7Z3S9 236 aa4.04□□□□□ -1.76
SMPD3-206ENST00000566009 MTURNQ8N3F0 131 aa4.04□□□□□ -1.76
SMPD3-206ENST00000566009 PRO1854Q9UHT4 67 aa4.04□□□□□ -1.76
SMPD3-206ENST00000566009 H3BMG7 143 aa4.03□□□□□ -1.76
SMPD3-206ENST00000566009 KRTAP19-8Q3LI54 63 aa4.03□□□□□ -1.76
SMPD3-206ENST00000566009 SMIM11BQ8TCY0 68 aa4.03□□□□□ -1.76
SMPD3-206ENST00000566009 TCL1BO95988 128 aa4.02□□□□□ -1.77
SMPD3-206ENST00000566009 OCIAD2Q56VL3 154 aa4.02□□□□□ -1.77
SMPD3-206ENST00000566009 PSMB2P49721 201 aa4.01□□□□□ -1.77
SMPD3-206ENST00000566009 IGLV5-48A0A075B6I7 105 aa4□□□□□ -1.77
SMPD3-206ENST00000566009 TRIAP1O43715 76 aa4□□□□□ -1.77
SMPD3-206ENST00000566009 LINC00575Q6W349 94 aa3.99□□□□□ -1.77
SMPD3-206ENST00000566009 hADV29S1A0JD25 119 aa3.98□□□□□ -1.77
SMPD3-206ENST00000566009 F8W1H4 67 aa3.98□□□□□ -1.77
SMPD3-206ENST00000566009 IMUPQ9GZP8 106 aa3.98□□□□□ -1.77
SMPD3-206ENST00000566009 ETDBQ3ZM63 59 aa3.97□□□□□ -1.77
SMPD3-206ENST00000566009 CLEC2BQ92478 149 aa3.97□□□□□ -1.77
SMPD3-206ENST00000566009 SCGB1C2P0DMR2 95 aa3.96□□□□□ -1.78
SMPD3-206ENST00000566009 F8WEM9 126 aa3.95□□□□□ -1.78
SMPD3-206ENST00000566009 LST1O00453 97 aa3.95□□□□□ -1.78
SMPD3-206ENST00000566009 Q6ZQY7 126 aa3.95□□□□□ -1.78
SMPD3-206ENST00000566009 FAM218AQ96MZ4 157 aa3.95□□□□□ -1.78
SMPD3-206ENST00000566009 C9JAW5 83 aa3.94□□□□□ -1.78
SMPD3-206ENST00000566009 SNCGO76070 127 aa3.94□□□□□ -1.78
SMPD3-206ENST00000566009 LYRM7Q5U5X0 104 aa3.94□□□□□ -1.78
SMPD3-206ENST00000566009 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.94□□□□□ -1.78
SMPD3-206ENST00000566009 ANKRD29Q8N6D5 301 aa3.94□□□□□ -1.78
SMPD3-206ENST00000566009 H0YGX0 51 aa3.93□□□□□ -1.78
SMPD3-206ENST00000566009 K7ERU9 68 aa3.93□□□□□ -1.78
SMPD3-206ENST00000566009 ATXN8Q156A1 80 aa3.93□□□□□ -1.78
SMPD3-206ENST00000566009 Q6JHZ5 121 aa3.93□□□□□ -1.78
SMPD3-206ENST00000566009 KRTAP5-3Q6L8H2 238 aa3.92□□□□□ -1.78
SMPD3-206ENST00000566009 TEN1Q86WV5 123 aa3.92□□□□□ -1.78
SMPD3-206ENST00000566009 PPDPFLQ8WWR9 84 aa3.92□□□□□ -1.78
SMPD3-206ENST00000566009 MT4P47944 62 aa3.91□□□□□ -1.78
SMPD3-206ENST00000566009 VPS25Q9BRG1 176 aa3.91□□□□□ -1.78
SMPD3-206ENST00000566009 SPRR2GQ9BYE4 73 aa3.9□□□□□ -1.79
SMPD3-206ENST00000566009 TRBV7-7A0A0K0K1E9 115 aa3.89□□□□□ -1.79
SMPD3-206ENST00000566009 H3BT86 120 aa3.89□□□□□ -1.79
SMPD3-206ENST00000566009 TRACP01848 142 aa3.89□□□□□ -1.79
SMPD3-206ENST00000566009 COX6CP09669 75 aa3.89□□□□□ -1.79
SMPD3-206ENST00000566009 A0A1B0GX51 115 aa3.88□□□□□ -1.79
SMPD3-206ENST00000566009 A0A1W2PNM2 257 aa3.88□□□□□ -1.79
SMPD3-206ENST00000566009 NDUFV3P56181 108 aaKnown RBP3.88□□□□□ -1.79
SMPD3-206ENST00000566009 BAALC-AS2P0C853 105 aa3.87□□□□□ -1.79
SMPD3-206ENST00000566009 KRTAP4-8A0A0G2JLE6 195 aa3.86□□□□□ -1.79
SMPD3-206ENST00000566009 KRTAP4-8Q9BYQ9 185 aa3.86□□□□□ -1.79
SMPD3-206ENST00000566009 MT-ATP8P03928 68 aa3.85□□□□□ -1.79
SMPD3-206ENST00000566009 SIGMAR1Q99720 223 aa3.85□□□□□ -1.79
SMPD3-206ENST00000566009 H3BQ85 93 aa3.84□□□□□ -1.79
SMPD3-206ENST00000566009 J3QR89 54 aa3.84□□□□□ -1.79
SMPD3-206ENST00000566009 PCP4P48539 62 aa3.83□□□□□ -1.8
SMPD3-206ENST00000566009 SS18L2Q9UHA2 77 aa3.83□□□□□ -1.8
SMPD3-206ENST00000566009 TMEM256-PLSCR3K7ERE1 68 aa3.82□□□□□ -1.8
SMPD3-206ENST00000566009 DNAL4O96015 105 aa3.82□□□□□ -1.8
SMPD3-206ENST00000566009 ORMDL1Q9P0S3 153 aa3.82□□□□□ -1.8
SMPD3-206ENST00000566009 A0A087WSZ3 146 aa3.81□□□□□ -1.8
SMPD3-206ENST00000566009 DSCR10P59022 87 aa3.81□□□□□ -1.8
SMPD3-206ENST00000566009 LCE4AQ5TA78 99 aa3.81□□□□□ -1.8
SMPD3-206ENST00000566009 FAM236AA0A1B0GUQ0 79 aa3.8□□□□□ -1.8
SMPD3-206ENST00000566009 FAM236BA0A1B0GV22 79 aa3.8□□□□□ -1.8
SMPD3-206ENST00000566009 FAM240AA0A1B0GVK7 77 aa3.79□□□□□ -1.8
SMPD3-206ENST00000566009 C14orf132Q9NPU4 83 aa3.79□□□□□ -1.8
SMPD3-206ENST00000566009 TRBV7-4A0A0J9YYF1 115 aa3.78□□□□□ -1.8
SMPD3-206ENST00000566009 A0A1B0GV72 72 aa3.78□□□□□ -1.8
SMPD3-206ENST00000566009 SPINK7P58062 85 aa3.78□□□□□ -1.8
SMPD3-206ENST00000566009 SCGB1A1P11684 91 aa3.77□□□□□ -1.81
SMPD3-206ENST00000566009 LINC00313P59037 77 aa3.77□□□□□ -1.81
SMPD3-206ENST00000566009 KRTAP12-2P59991 146 aa3.77□□□□□ -1.81
SMPD3-206ENST00000566009 CCKP06307 115 aa3.76□□□□□ -1.81
SMPD3-206ENST00000566009 IGKV4-1P06312 121 aa3.76□□□□□ -1.81
SMPD3-206ENST00000566009 RBM3P98179 157 aaKnown RBP3.76□□□□□ -1.81
SMPD3-206ENST00000566009 WFDC13Q8IUB5 93 aa3.76□□□□□ -1.81
SMPD3-206ENST00000566009 ACYP1P07311 99 aa3.75□□□□□ -1.81
SMPD3-206ENST00000566009 DEFB116Q30KQ4 102 aa3.74□□□□□ -1.81
SMPD3-206ENST00000566009 Q6ZQT0 140 aa3.74□□□□□ -1.81
SMPD3-206ENST00000566009 ZCCHC13Q8WW36 166 aaKnown RBP3.74□□□□□ -1.81
SMPD3-206ENST00000566009 DSCR8Q96T75 97 aa3.74□□□□□ -1.81
SMPD3-206ENST00000566009 LINC00472Q9H8W2 130 aa3.74□□□□□ -1.81
SMPD3-206ENST00000566009 AHNAKQ09666 5890 aaKnown RBP3.73□□□□□ -1.81
SMPD3-206ENST00000566009 LOC110117498A0A087WWA1 95 aa3.73□□□□□ -1.81
SMPD3-206ENST00000566009 LINC00643Q86TS7 51 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms