RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 NDUFB1O75438 58 aa2.53□□□□□ -2
LINC00561-201ENST00000565815 SPRR1AP35321 89 aa2.53□□□□□ -2
LINC00561-201ENST00000565815 SYCNQ0VAF6 134 aa2.53□□□□□ -2
LINC00561-201ENST00000565815 ESRGQ1W209 222 aa2.53□□□□□ -2
LINC00561-201ENST00000565815 SPRR4Q96PI1 79 aa2.53□□□□□ -2
LINC00561-201ENST00000565815 SNURFQ9Y675 71 aa2.53□□□□□ -2
LINC00561-201ENST00000565815 VPS13DQ5THJ4 4388 aa2.52□□□□□ -2.01
LINC00561-201ENST00000565815 H3BPC8 53 aa2.52□□□□□ -2.01
LINC00561-201ENST00000565815 Q6ZRU5 148 aa2.52□□□□□ -2.01
LINC00561-201ENST00000565815 C15orf56Q8N910 161 aa2.52□□□□□ -2.01
LINC00561-201ENST00000565815 XAGE1AQ9HD64 81 aa2.52□□□□□ -2.01
LINC00561-201ENST00000565815 V9GYY9 64 aa2.52□□□□□ -2.01
LINC00561-201ENST00000565815 CSMD3Q7Z407 3707 aa2.52□□□□□ -2.01
LINC00561-201ENST00000565815 Q6ZRX8 168 aa2.52□□□□□ -2.01
LINC00561-201ENST00000565815 FP248Q71RG6 208 aaPredicted RBP2.52□□□□□ -2.01
LINC00561-201ENST00000565815 LINC00588Q9Y4M8 146 aa2.52□□□□□ -2.01
LINC00561-201ENST00000565815 DNAH2Q9P225 4427 aa2.52□□□□□ -2.01
LINC00561-201ENST00000565815 FAT2Q9NYQ8 4349 aa2.51□□□□□ -2.01
LINC00561-201ENST00000565815 CYP4F30PQ9H0H9 118 aa2.51□□□□□ -2.01
LINC00561-201ENST00000565815 ABCA13Q86UQ4 5058 aa2.51□□□□□ -2.01
LINC00561-201ENST00000565815 ETDCA0A1B0GVM5 59 aa2.51□□□□□ -2.01
LINC00561-201ENST00000565815 HTN3P15516 51 aa2.51□□□□□ -2.01
LINC00561-201ENST00000565815 PKIGQ9Y2B9 76 aa2.51□□□□□ -2.01
LINC00561-201ENST00000565815 KMT2AQ03164 3969 aa2.5□□□□□ -2.01
LINC00561-201ENST00000565815 IGLV1-50A0A075B6I6 118 aa2.5□□□□□ -2.01
LINC00561-201ENST00000565815 A0A087WTM6 91 aa2.5□□□□□ -2.01
LINC00561-201ENST00000565815 Q1T7F1 81 aa2.5□□□□□ -2.01
LINC00561-201ENST00000565815 C1orf137Q5JT78 98 aa2.5□□□□□ -2.01
LINC00561-201ENST00000565815 Q6ZRN7 208 aaPredicted RBP2.5□□□□□ -2.01
LINC00561-201ENST00000565815 ZCCHC13Q8WW36 166 aaKnown RBP2.5□□□□□ -2.01
LINC00561-201ENST00000565815 DMBT1Q9UGM3 2413 aaPredicted RBP2.49□□□□□ -2.01
LINC00561-201ENST00000565815 KRTAP10-1P60331 282 aa2.49□□□□□ -2.01
LINC00561-201ENST00000565815 SCXQ7RTU7 201 aa2.49□□□□□ -2.01
LINC00561-201ENST00000565815 WFDC10BQ8IUB3 73 aa2.49□□□□□ -2.01
LINC00561-201ENST00000565815 hDV103S1A0JD37 113 aa2.49□□□□□ -2.01
LINC00561-201ENST00000565815 SPANXA2-OT1Q8N9U9 137 aa2.49□□□□□ -2.01
LINC00561-201ENST00000565815 A0A1W2PNM2 257 aa2.48□□□□□ -2.01
LINC00561-201ENST00000565815 MP68P56378 58 aa2.48□□□□□ -2.01
LINC00561-201ENST00000565815 HSPG2P98160 4391 aa2.48□□□□□ -2.01
LINC00561-201ENST00000565815 IGKV2D-24A0A075B6R9 120 aa2.48□□□□□ -2.01
LINC00561-201ENST00000565815 HCG22E2RYF7 251 aa2.48□□□□□ -2.01
LINC00561-201ENST00000565815 C1orf195Q5TG92 126 aa2.48□□□□□ -2.01
LINC00561-201ENST00000565815 MRPL55Q7Z7F7 128 aaKnown RBP2.48□□□□□ -2.01
LINC00561-201ENST00000565815 PRR15Q8IV56 129 aa2.48□□□□□ -2.01
LINC00561-201ENST00000565815 HIGD2AQ9BW72 106 aa2.48□□□□□ -2.01
LINC00561-201ENST00000565815 SMR3BP02814 79 aaPredicted RBP2.47□□□□□ -2.01
LINC00561-201ENST00000565815 Q6ZSA8 131 aa2.47□□□□□ -2.01
LINC00561-201ENST00000565815 Q9BRP9 147 aa2.47□□□□□ -2.01
LINC00561-201ENST00000565815 SPRR1BP22528 89 aa2.46□□□□□ -2.02
LINC00561-201ENST00000565815 Q8N9L7 120 aa2.46□□□□□ -2.02
LINC00561-201ENST00000565815 BRK1Q8WUW1 75 aa2.46□□□□□ -2.02
LINC00561-201ENST00000565815 LINC00474Q9P2X8 69 aa2.46□□□□□ -2.02
LINC00561-201ENST00000565815 DEFB105AQ8NG35 78 aa2.46□□□□□ -2.02
LINC00561-201ENST00000565815 FRAS1Q86XX4 4008 aa2.45□□□□□ -2.02
LINC00561-201ENST00000565815 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
LINC00561-201ENST00000565815 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.45□□□□□ -2.02
LINC00561-201ENST00000565815 PSCAO43653 123 aa2.45□□□□□ -2.02
LINC00561-201ENST00000565815 UBE2BP63146 152 aa2.45□□□□□ -2.02
LINC00561-201ENST00000565815 LIMD2Q9BT23 127 aa2.45□□□□□ -2.02
LINC00561-201ENST00000565815 LRP1BQ9NZR2 4599 aa2.45□□□□□ -2.02
LINC00561-201ENST00000565815 TRAV22A0A0B4J277 110 aa2.45□□□□□ -2.02
LINC00561-201ENST00000565815 RPL37AP61513 92 aaKnown RBP2.45□□□□□ -2.02
LINC00561-201ENST00000565815 C1orf64Q8NEQ6 169 aa2.45□□□□□ -2.02
LINC00561-201ENST00000565815 K7EQZ3 153 aa2.44□□□□□ -2.02
LINC00561-201ENST00000565815 CNBPP62633 177 aaKnown RBP2.44□□□□□ -2.02
LINC00561-201ENST00000565815 FAM229BQ4G0N7 80 aa2.44□□□□□ -2.02
LINC00561-201ENST00000565815 PKHD1P08F94 4074 aa2.44□□□□□ -2.02
LINC00561-201ENST00000565815 VPS13BQ7Z7G8 4022 aa2.44□□□□□ -2.02
LINC00561-201ENST00000565815 TP53AIP1Q9HCN2 124 aa2.44□□□□□ -2.02
LINC00561-201ENST00000565815 PKD1P98161 4303 aa2.44□□□□□ -2.02
LINC00561-201ENST00000565815 A8MWP4 228 aa2.43□□□□□ -2.02
LINC00561-201ENST00000565815 IGFL1Q6UW32 110 aa2.43□□□□□ -2.02
LINC00561-201ENST00000565815 LRCOL1A6NCL2 159 aa2.43□□□□□ -2.02
LINC00561-201ENST00000565815 UBE2AP49459 152 aa2.42□□□□□ -2.02
LINC00561-201ENST00000565815 DEFB116Q30KQ4 102 aa2.42□□□□□ -2.02
LINC00561-201ENST00000565815 ST20-AS1Q8NBB2 130 aa2.42□□□□□ -2.02
LINC00561-201ENST00000565815 CASC2Q6XLA1 102 aa2.42□□□□□ -2.02
LINC00561-201ENST00000565815 H0Y9P7 68 aa2.41□□□□□ -2.02
LINC00561-201ENST00000565815 KRTAP10-4P60372 401 aaPredicted RBP2.41□□□□□ -2.02
LINC00561-201ENST00000565815 MOBPQ13875 183 aa2.41□□□□□ -2.02
LINC00561-201ENST00000565815 LINC00208Q96KT6 92 aa2.41□□□□□ -2.02
LINC00561-201ENST00000565815 APOBP04114 4563 aaKnown RBP2.41□□□□□ -2.02
LINC00561-201ENST00000565815 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
LINC00561-201ENST00000565815 A0A087WSZ3 146 aa2.4□□□□□ -2.02
LINC00561-201ENST00000565815 PMAIP1Q13794 54 aa2.4□□□□□ -2.02
LINC00561-201ENST00000565815 C9orf163Q8N9P6 203 aa2.4□□□□□ -2.02
LINC00561-201ENST00000565815 LINC00472Q9H8W2 130 aa2.4□□□□□ -2.02
LINC00561-201ENST00000565815 LOC101927531A0A1B0GV80 90 aa2.4□□□□□ -2.03
LINC00561-201ENST00000565815 MT1HL1P0DM35 61 aa2.4□□□□□ -2.03
LINC00561-201ENST00000565815 CAMK2N1Q7Z7J9 78 aa2.4□□□□□ -2.03
LINC00561-201ENST00000565815 ASB16-AS1Q495Z4 193 aa2.4□□□□□ -2.03
LINC00561-201ENST00000565815 WFDC13Q8IUB5 93 aa2.39□□□□□ -2.03
LINC00561-201ENST00000565815 ZNF706Q9Y5V0 76 aaPredicted RBP2.39□□□□□ -2.03
LINC00561-201ENST00000565815 A0A1B0GVX0 72 aa2.39□□□□□ -2.03
LINC00561-201ENST00000565815 LINC00483Q53H64 154 aa2.39□□□□□ -2.03
LINC00561-201ENST00000565815 A0A096LNI7 61 aa2.38□□□□□ -2.03
LINC00561-201ENST00000565815 NDUFS5O43920 106 aa2.38□□□□□ -2.03
LINC00561-201ENST00000565815 Q5VV11 94 aa2.38□□□□□ -2.03
LINC00561-201ENST00000565815 ATP11AUNQ6ZP68 121 aa2.38□□□□□ -2.03
LINC00561-201ENST00000565815 MYCBP2O75592 4640 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms