RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 CSMD3Q7Z407 3707 aa2.13□□□□□ -2.07
CHD9-212ENST00000564641 A6NN06 94 aa2.13□□□□□ -2.07
CHD9-212ENST00000564641 C16orf90A8MZG2 172 aa2.13□□□□□ -2.07
CHD9-212ENST00000564641 IGHV3-53P01767 116 aa2.13□□□□□ -2.07
CHD9-212ENST00000564641 HTN1P15515 57 aa2.13□□□□□ -2.07
CHD9-212ENST00000564641 SPINK13Q1W4C9 94 aa2.13□□□□□ -2.07
CHD9-212ENST00000564641 Q5VV11 94 aa2.13□□□□□ -2.07
CHD9-212ENST00000564641 PRR15LQ9BU68 103 aa2.13□□□□□ -2.07
CHD9-212ENST00000564641 DNAH7Q8WXX0 4024 aa2.13□□□□□ -2.07
CHD9-212ENST00000564641 KMT2CQ8NEZ4 4911 aaKnown RBP2.13□□□□□ -2.07
CHD9-212ENST00000564641 ETDCA0A1B0GVM5 59 aa2.12□□□□□ -2.07
CHD9-212ENST00000564641 A6NED7 52 aa2.12□□□□□ -2.07
CHD9-212ENST00000564641 NDUFB1O75438 58 aa2.12□□□□□ -2.07
CHD9-212ENST00000564641 IGKV4-1P06312 121 aa2.12□□□□□ -2.07
CHD9-212ENST00000564641 ELOF1P60002 83 aaKnown RBP2.12□□□□□ -2.07
CHD9-212ENST00000564641 DEFB135Q30KP9 77 aa2.12□□□□□ -2.07
CHD9-212ENST00000564641 LINC00483Q53H64 154 aa2.12□□□□□ -2.07
CHD9-212ENST00000564641 DIRC1Q969H9 104 aa2.12□□□□□ -2.07
CHD9-212ENST00000564641 IGKV3OR2-268A0A0C4DH90 116 aa2.11□□□□□ -2.07
CHD9-212ENST00000564641 COX7BP24311 80 aa2.11□□□□□ -2.07
CHD9-212ENST00000564641 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.11□□□□□ -2.07
CHD9-212ENST00000564641 UBE2DNLQ8IWF7 75 aa2.11□□□□□ -2.07
CHD9-212ENST00000564641 CDC42SE1Q9NRR8 79 aa2.11□□□□□ -2.07
CHD9-212ENST00000564641 SACSQ9NZJ4 4579 aa2.11□□□□□ -2.07
CHD9-212ENST00000564641 SPART-AS1P0CW21 52 aa2.1□□□□□ -2.07
CHD9-212ENST00000564641 MP68P56378 58 aa2.1□□□□□ -2.07
CHD9-212ENST00000564641 COX17Q14061 63 aa2.1□□□□□ -2.07
CHD9-212ENST00000564641 PLECQ15149 4684 aaKnown RBP2.1□□□□□ -2.07
CHD9-212ENST00000564641 C9orf116Q5BN46 136 aaPredicted RBP2.1□□□□□ -2.07
CHD9-212ENST00000564641 Q6ZQY7 126 aa2.1□□□□□ -2.07
CHD9-212ENST00000564641 ZCCHC13Q8WW36 166 aaKnown RBP2.1□□□□□ -2.07
CHD9-212ENST00000564641 MUC4Q99102 2169 aa2.1□□□□□ -2.07
CHD9-212ENST00000564641 DNAH1Q9P2D7 4330 aa2.1□□□□□ -2.07
CHD9-212ENST00000564641 TRGV2A0A075B6R0 118 aa2.09□□□□□ -2.07
CHD9-212ENST00000564641 Q8IZM0 81 aa2.09□□□□□ -2.07
CHD9-212ENST00000564641 LINC00208Q96KT6 92 aa2.09□□□□□ -2.07
CHD9-212ENST00000564641 WFDC10AQ9H1F0 79 aa2.09□□□□□ -2.07
CHD9-212ENST00000564641 DYNC2H1Q8NCM8 4307 aaKnown RBP2.08□□□□□ -2.08
CHD9-212ENST00000564641 DEFB131BA0A096LNP1 70 aa2.08□□□□□ -2.08
CHD9-212ENST00000564641 TRGV1A0A0A0MS02 117 aa2.08□□□□□ -2.08
CHD9-212ENST00000564641 LINC00959A0A1B0GUT2 108 aa2.08□□□□□ -2.08
CHD9-212ENST00000564641 LOC101927531A0A1B0GV80 90 aa2.08□□□□□ -2.08
CHD9-212ENST00000564641 A0A1B0GW54 56 aa2.08□□□□□ -2.08
CHD9-212ENST00000564641 PRM2P04554 102 aa2.08□□□□□ -2.08
CHD9-212ENST00000564641 LINC01554Q52M75 96 aa2.08□□□□□ -2.08
CHD9-212ENST00000564641 LUZP6Q538Z0 58 aa2.08□□□□□ -2.08
CHD9-212ENST00000564641 C1orf134Q5TEV5 83 aa2.08□□□□□ -2.08
CHD9-212ENST00000564641 Q9BRP9 147 aa2.08□□□□□ -2.08
CHD9-212ENST00000564641 TRGV4A0A0C4DH28 118 aa2.07□□□□□ -2.08
CHD9-212ENST00000564641 H3BPC8 53 aa2.07□□□□□ -2.08
CHD9-212ENST00000564641 DEFB131AP59861 70 aa2.07□□□□□ -2.08
CHD9-212ENST00000564641 CASC2Q6XLA1 102 aa2.07□□□□□ -2.08
CHD9-212ENST00000564641 KRTAP13-1Q8IUC0 172 aa2.07□□□□□ -2.08
CHD9-212ENST00000564641 ST20-AS1Q8NBB2 130 aa2.07□□□□□ -2.08
CHD9-212ENST00000564641 VPS13DQ5THJ4 4388 aa2.07□□□□□ -2.08
CHD9-212ENST00000564641 DNAH11Q96DT5 4516 aa2.07□□□□□ -2.08
CHD9-212ENST00000564641 A8MTW9 85 aa2.06□□□□□ -2.08
CHD9-212ENST00000564641 IGLV6-57P01721 117 aa2.06□□□□□ -2.08
CHD9-212ENST00000564641 LINC00313P59037 77 aa2.06□□□□□ -2.08
CHD9-212ENST00000564641 SPAG11BQ08648 103 aa2.06□□□□□ -2.08
CHD9-212ENST00000564641 ASB16-AS1Q495Z4 193 aa2.06□□□□□ -2.08
CHD9-212ENST00000564641 Q8NAQ8 132 aa2.06□□□□□ -2.08
CHD9-212ENST00000564641 APLNQ9ULZ1 77 aa2.06□□□□□ -2.08
CHD9-212ENST00000564641 LINC01558Q9Y6Z2 57 aa2.06□□□□□ -2.08
CHD9-212ENST00000564641 KMT2AQ03164 3969 aa2.05□□□□□ -2.08
CHD9-212ENST00000564641 DNAH2Q9P225 4427 aa2.05□□□□□ -2.08
CHD9-212ENST00000564641 KRTAP12-4P60329 112 aa2.05□□□□□ -2.08
CHD9-212ENST00000564641 DNAH10Q8IVF4 4471 aa2.05□□□□□ -2.08
CHD9-212ENST00000564641 H0Y9P7 68 aa2.04□□□□□ -2.08
CHD9-212ENST00000564641 HTN3P15516 51 aa2.04□□□□□ -2.08
CHD9-212ENST00000564641 COA5Q86WW8 74 aa2.04□□□□□ -2.08
CHD9-212ENST00000564641 DEFB105AQ8NG35 78 aa2.04□□□□□ -2.08
CHD9-212ENST00000564641 KCNQ1DNQ9H478 68 aa2.04□□□□□ -2.08
CHD9-212ENST00000564641 STARD9Q9P2P6 4700 aa2.04□□□□□ -2.08
CHD9-212ENST00000564641 RYR3Q15413 4870 aa2.03□□□□□ -2.08
CHD9-212ENST00000564641 H3BNG1 76 aa2.03□□□□□ -2.08
CHD9-212ENST00000564641 DEFB4AO15263 64 aa2.03□□□□□ -2.08
CHD9-212ENST00000564641 NOP10Q9NPE3 64 aaKnown RBP2.03□□□□□ -2.08
CHD9-212ENST00000564641 DNAH17Q9UFH2 4485 aa2.03□□□□□ -2.08
CHD9-212ENST00000564641 FRAS1Q86XX4 4008 aa2.02□□□□□ -2.09
CHD9-212ENST00000564641 HYDINQ4G0P3 5121 aa2.02□□□□□ -2.09
CHD9-212ENST00000564641 NBDYA0A0U1RRE5 68 aa2.02□□□□□ -2.09
CHD9-212ENST00000564641 DEFB130BP0DP73 79 aa2.02□□□□□ -2.09
CHD9-212ENST00000564641 DEFB130AP0DP74 79 aa2.02□□□□□ -2.09
CHD9-212ENST00000564641 SPINK7P58062 85 aa2.02□□□□□ -2.09
CHD9-212ENST00000564641 CNBPP62633 177 aaKnown RBP2.02□□□□□ -2.09
CHD9-212ENST00000564641 KRTAP13-2Q52LG2 175 aa2.02□□□□□ -2.09
CHD9-212ENST00000564641 SPAG11AQ6PDA7 123 aa2.02□□□□□ -2.09
CHD9-212ENST00000564641 UNQ6190/PRO20217Q6UXQ8 127 aa2.02□□□□□ -2.09
CHD9-212ENST00000564641 WFDC13Q8IUB5 93 aa2.02□□□□□ -2.09
CHD9-212ENST00000564641 Q8NDZ9 215 aa2.02□□□□□ -2.09
CHD9-212ENST00000564641 RETNLBQ9BQ08 111 aa2.02□□□□□ -2.09
CHD9-212ENST00000564641 ZNF706Q9Y5V0 76 aaPredicted RBP2.02□□□□□ -2.09
CHD9-212ENST00000564641 DMBT1Q9UGM3 2413 aaPredicted RBP2.02□□□□□ -2.09
CHD9-212ENST00000564641 ALMS1Q8TCU4 4167 aa2.02□□□□□ -2.09
CHD9-212ENST00000564641 HECTD4Q9Y4D8 3996 aa2.01□□□□□ -2.09
CHD9-212ENST00000564641 DYNC1H1Q14204 4646 aaKnown RBP2.01□□□□□ -2.09
CHD9-212ENST00000564641 IGLV5-48A0A075B6I7 105 aa2.01□□□□□ -2.09
CHD9-212ENST00000564641 A0A1W2PNM2 257 aa2.01□□□□□ -2.09
CHD9-212ENST00000564641 A8MUU9 505 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms