RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 RETNLBQ9BQ08 111 aa7.35□□□□□ -1.23
SCAMP2-204ENST00000563829 ANAPC11Q9NYG5 84 aa7.34□□□□□ -1.23
SCAMP2-204ENST00000563829 LYSTQ99698 3801 aa7.34□□□□□ -1.24
SCAMP2-204ENST00000563829 UQCR11O14957 56 aa7.33□□□□□ -1.24
SCAMP2-204ENST00000563829 PANO1I0J062 215 aa7.32□□□□□ -1.24
SCAMP2-204ENST00000563829 DMAC1Q96GE9 116 aa7.3□□□□□ -1.24
SCAMP2-204ENST00000563829 KRTAP13-1Q8IUC0 172 aa7.3□□□□□ -1.24
SCAMP2-204ENST00000563829 ALMS1Q8TCU4 4167 aa7.29□□□□□ -1.24
SCAMP2-204ENST00000563829 KRTAP13-3Q3SY46 172 aa7.29□□□□□ -1.24
SCAMP2-204ENST00000563829 KMT2BQ9UMN6 2715 aaPredicted RBP7.29□□□□□ -1.24
SCAMP2-204ENST00000563829 J3QKU1 62 aa7.25□□□□□ -1.25
SCAMP2-204ENST00000563829 WWC2-AS2Q96NR7 200 aa7.25□□□□□ -1.25
SCAMP2-204ENST00000563829 DNAH9Q9NYC9 4486 aa7.24□□□□□ -1.25
SCAMP2-204ENST00000563829 C14orf177Q52M58 125 aa7.23□□□□□ -1.25
SCAMP2-204ENST00000563829 UBE2DNLQ8IWF7 75 aa7.23□□□□□ -1.25
SCAMP2-204ENST00000563829 LINC00483Q53H64 154 aa7.22□□□□□ -1.25
SCAMP2-204ENST00000563829 STAB2Q8WWQ8 2551 aa7.2□□□□□ -1.26
SCAMP2-204ENST00000563829 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.2□□□□□ -1.26
SCAMP2-204ENST00000563829 ZNF861PO60384 105 aa7.19□□□□□ -1.26
SCAMP2-204ENST00000563829 C1orf134Q5TEV5 83 aa7.19□□□□□ -1.26
SCAMP2-204ENST00000563829 CIRBP-AS1Q8TBR5 109 aa7.19□□□□□ -1.26
SCAMP2-204ENST00000563829 ZNF706Q9Y5V0 76 aaPredicted RBP7.18□□□□□ -1.26
SCAMP2-204ENST00000563829 SPINK1P00995 79 aa7.16□□□□□ -1.26
SCAMP2-204ENST00000563829 FAM229AH3BQW9 127 aa7.15□□□□□ -1.26
SCAMP2-204ENST00000563829 PSORS1C2Q9UIG4 136 aa7.15□□□□□ -1.27
SCAMP2-204ENST00000563829 FRAS1Q86XX4 4008 aa7.14□□□□□ -1.27
SCAMP2-204ENST00000563829 IGKV2D-30A0A075B6S6 120 aa7.14□□□□□ -1.27
SCAMP2-204ENST00000563829 IGKV2-30P06310 120 aa7.14□□□□□ -1.27
SCAMP2-204ENST00000563829 SPACA4Q8TDM5 124 aa7.12□□□□□ -1.27
SCAMP2-204ENST00000563829 IGLV7-43P04211 117 aa7.11□□□□□ -1.27
SCAMP2-204ENST00000563829 HUWE1Q7Z6Z7 4374 aaKnown RBP7.1□□□□□ -1.27
SCAMP2-204ENST00000563829 FLG2Q5D862 2391 aaPredicted RBP7.09□□□□□ -1.27
SCAMP2-204ENST00000563829 IGLV5-52A0A0A0MRZ9 124 aa7.08□□□□□ -1.28
SCAMP2-204ENST00000563829 MEGF8Q7Z7M0 2845 aa7.08□□□□□ -1.28
SCAMP2-204ENST00000563829 CMYA5Q8N3K9 4069 aa7.07□□□□□ -1.28
SCAMP2-204ENST00000563829 DNAH8Q96JB1 4490 aa7.07□□□□□ -1.28
SCAMP2-204ENST00000563829 TGP01266 2768 aa7.06□□□□□ -1.28
SCAMP2-204ENST00000563829 DNAH7Q8WXX0 4024 aa7.06□□□□□ -1.28
SCAMP2-204ENST00000563829 ROMO1P60602 79 aa7.06□□□□□ -1.28
SCAMP2-204ENST00000563829 KRTAP25-1Q3LHN0 102 aa7.05□□□□□ -1.28
SCAMP2-204ENST00000563829 APLNQ9ULZ1 77 aa7.02□□□□□ -1.29
SCAMP2-204ENST00000563829 CRIPTQ9P021 101 aa7.02□□□□□ -1.29
SCAMP2-204ENST00000563829 NBDYA0A0U1RRE5 68 aa7.02□□□□□ -1.29
SCAMP2-204ENST00000563829 Q8N1X5 172 aa7.02□□□□□ -1.29
SCAMP2-204ENST00000563829 A8MUU9 505 aa7.01□□□□□ -1.29
SCAMP2-204ENST00000563829 LINC00304Q8N9R0 145 aa7.01□□□□□ -1.29
SCAMP2-204ENST00000563829 KRTAP24-1Q3LI83 254 aa7□□□□□ -1.29
SCAMP2-204ENST00000563829 H0YAA0 97 aa6.99□□□□□ -1.29
SCAMP2-204ENST00000563829 Q6ZRN7 208 aaPredicted RBP6.99□□□□□ -1.29
SCAMP2-204ENST00000563829 Q6ZSA8 131 aa6.98□□□□□ -1.29
SCAMP2-204ENST00000563829 DNAH3Q8TD57 4116 aa6.97□□□□□ -1.29
SCAMP2-204ENST00000563829 LY6G6CO95867 125 aa6.96□□□□□ -1.3
SCAMP2-204ENST00000563829 KRTAP16-1A8MUX0 517 aa6.95□□□□□ -1.3
SCAMP2-204ENST00000563829 DNAH17Q9UFH2 4485 aa6.95□□□□□ -1.3
SCAMP2-204ENST00000563829 SSBP3-AS1Q7Z2R9 100 aa6.94□□□□□ -1.3
SCAMP2-204ENST00000563829 A0A087WTM6 91 aa6.93□□□□□ -1.3
SCAMP2-204ENST00000563829 TYMSOSQ8TAI1 123 aa6.92□□□□□ -1.3
SCAMP2-204ENST00000563829 A0A1B0GU33 70 aa6.89□□□□□ -1.31
SCAMP2-204ENST00000563829 FBN3Q75N90 2809 aa6.89□□□□□ -1.31
SCAMP2-204ENST00000563829 LCE2DQ5TA82 110 aaPredicted RBP6.89□□□□□ -1.31
SCAMP2-204ENST00000563829 PLECQ15149 4684 aaKnown RBP6.88□□□□□ -1.31
SCAMP2-204ENST00000563829 P0C880 135 aa6.88□□□□□ -1.31
SCAMP2-204ENST00000563829 HECTD4Q9Y4D8 3996 aa6.85□□□□□ -1.31
SCAMP2-204ENST00000563829 KRTAP13-2Q52LG2 175 aa6.84□□□□□ -1.31
SCAMP2-204ENST00000563829 H1FX-AS1Q4G0G2 97 aa6.81□□□□□ -1.32
SCAMP2-204ENST00000563829 VPS13DQ5THJ4 4388 aa6.8□□□□□ -1.32
SCAMP2-204ENST00000563829 K7ERS5 55 aa6.79□□□□□ -1.32
SCAMP2-204ENST00000563829 KRTAP3-3Q9BYR6 98 aa6.79□□□□□ -1.32
SCAMP2-204ENST00000563829 KRTAP3-2Q9BYR7 98 aa6.79□□□□□ -1.32
SCAMP2-204ENST00000563829 SPINT4Q6UDR6 99 aa6.75□□□□□ -1.33
SCAMP2-204ENST00000563829 NUPR2A6NF83 97 aa6.74□□□□□ -1.33
SCAMP2-204ENST00000563829 DMBT1Q9UGM3 2413 aaPredicted RBP6.74□□□□□ -1.33
SCAMP2-204ENST00000563829 KMT2AQ03164 3969 aa6.74□□□□□ -1.33
SCAMP2-204ENST00000563829 DYNC2H1Q8NCM8 4307 aaKnown RBP6.72□□□□□ -1.33
SCAMP2-204ENST00000563829 DNAH2Q9P225 4427 aa6.71□□□□□ -1.34
SCAMP2-204ENST00000563829 DNAH6Q9C0G6 4158 aa6.69□□□□□ -1.34
SCAMP2-204ENST00000563829 COX6B2Q6YFQ2 88 aa6.69□□□□□ -1.34
SCAMP2-204ENST00000563829 KRTAP3-1Q9BYR8 98 aa6.69□□□□□ -1.34
SCAMP2-204ENST00000563829 STARD9Q9P2P6 4700 aa6.68□□□□□ -1.34
SCAMP2-204ENST00000563829 DNAH11Q96DT5 4516 aa6.67□□□□□ -1.34
SCAMP2-204ENST00000563829 NDUFAF8A1L188 74 aa6.66□□□□□ -1.34
SCAMP2-204ENST00000563829 C9orf92A6NGG3 77 aa6.63□□□□□ -1.35
SCAMP2-204ENST00000563829 KRTAP1-4P0C5Y4 121 aa6.63□□□□□ -1.35
SCAMP2-204ENST00000563829 TPRXLQ17RH7 258 aa6.63□□□□□ -1.35
SCAMP2-204ENST00000563829 A0A0D9SG42 100 aa6.63□□□□□ -1.35
SCAMP2-204ENST00000563829 C10orf95Q9H7T3 257 aa6.62□□□□□ -1.35
SCAMP2-204ENST00000563829 KRTAP10-2P60368 255 aa6.61□□□□□ -1.35
SCAMP2-204ENST00000563829 LRP1BQ9NZR2 4599 aa6.6□□□□□ -1.35
SCAMP2-204ENST00000563829 RPL37P61927 97 aaKnown RBP6.59□□□□□ -1.36
SCAMP2-204ENST00000563829 J3QL48 77 aa6.57□□□□□ -1.36
SCAMP2-204ENST00000563829 C20orf166-AS1Q96NR2 134 aa6.57□□□□□ -1.36
SCAMP2-204ENST00000563829 DNAH5Q8TE73 4624 aa6.53□□□□□ -1.36
SCAMP2-204ENST00000563829 PRKDCP78527 4128 aaKnown RBP6.52□□□□□ -1.37
SCAMP2-204ENST00000563829 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
SCAMP2-204ENST00000563829 KRTAP13-4Q3LI77 160 aa6.52□□□□□ -1.37
SCAMP2-204ENST00000563829 KRTAP10-1P60331 282 aa6.51□□□□□ -1.37
SCAMP2-204ENST00000563829 VPS13BQ7Z7G8 4022 aa6.51□□□□□ -1.37
SCAMP2-204ENST00000563829 KRTAP10-6P60371 365 aaPredicted RBP6.46□□□□□ -1.38
SCAMP2-204ENST00000563829 DNHD1Q96M86 4753 aa6.44□□□□□ -1.38
SCAMP2-204ENST00000563829 FAT2Q9NYQ8 4349 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms