RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 HYDINQ4G0P3 5121 aa2.66□□□□□ -1.98
SMG1-207ENST00000563235 COA5Q86WW8 74 aa2.66□□□□□ -1.98
SMG1-207ENST00000563235 ETDCA0A1B0GVM5 59 aa2.65□□□□□ -1.98
SMG1-207ENST00000563235 KRTAP10-8P60410 259 aa2.65□□□□□ -1.98
SMG1-207ENST00000563235 A0A1W2PNN7 141 aa2.65□□□□□ -1.99
SMG1-207ENST00000563235 COX17Q14061 63 aa2.65□□□□□ -1.99
SMG1-207ENST00000563235 LY6EQ16553 131 aa2.65□□□□□ -1.99
SMG1-207ENST00000563235 KRTAP29-1A8MX34 341 aaPredicted RBP2.65□□□□□ -1.99
SMG1-207ENST00000563235 LINC00158P58513 81 aa2.65□□□□□ -1.99
SMG1-207ENST00000563235 IGKV2D-30A0A075B6S6 120 aa2.64□□□□□ -1.99
SMG1-207ENST00000563235 C4orf3Q8WVX3 66 aa2.64□□□□□ -1.99
SMG1-207ENST00000563235 DNAH1Q9P2D7 4330 aa2.64□□□□□ -1.99
SMG1-207ENST00000563235 RYR2Q92736 4967 aa2.64□□□□□ -1.99
SMG1-207ENST00000563235 H3BUA1 57 aa2.64□□□□□ -1.99
SMG1-207ENST00000563235 IGLV6-57P01721 117 aa2.63□□□□□ -1.99
SMG1-207ENST00000563235 Q8IZM0 81 aa2.63□□□□□ -1.99
SMG1-207ENST00000563235 DEFB1P60022 68 aa2.63□□□□□ -1.99
SMG1-207ENST00000563235 MAPK1IP1LQ8NDC0 245 aa2.62□□□□□ -1.99
SMG1-207ENST00000563235 TRRAPQ9Y4A5 3859 aa2.62□□□□□ -1.99
SMG1-207ENST00000563235 A0A1B0GU69 56 aa2.61□□□□□ -1.99
SMG1-207ENST00000563235 Q6ZQY7 126 aa2.61□□□□□ -1.99
SMG1-207ENST00000563235 MAP1AP78559 2803 aaPredicted RBP2.61□□□□□ -1.99
SMG1-207ENST00000563235 VPS13CQ709C8 3753 aa2.61□□□□□ -1.99
SMG1-207ENST00000563235 Q8N9L7 120 aa2.61□□□□□ -1.99
SMG1-207ENST00000563235 USMG5Q96IX5 58 aa2.61□□□□□ -1.99
SMG1-207ENST00000563235 IGLV5-48A0A075B6I7 105 aa2.6□□□□□ -1.99
SMG1-207ENST00000563235 RHPN1-AS1Q9BWJ2 59 aa2.6□□□□□ -1.99
SMG1-207ENST00000563235 AKAP6Q13023 2319 aa2.6□□□□□ -1.99
SMG1-207ENST00000563235 SONP18583 2426 aaKnown RBP2.59□□□□□ -1.99
SMG1-207ENST00000563235 ACYP2P14621 99 aa2.59□□□□□ -1.99
SMG1-207ENST00000563235 RYR1P21817 5038 aa2.59□□□□□ -2
SMG1-207ENST00000563235 DSCR10P59022 87 aa2.58□□□□□ -2
SMG1-207ENST00000563235 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.58□□□□□ -24e-7■■■■■ 62
SMG1-207ENST00000563235 SORL1Q92673 2214 aa2.58□□□□□ -2
SMG1-207ENST00000563235 G3V318 75 aa2.58□□□□□ -2
SMG1-207ENST00000563235 WNK1Q9H4A3 2382 aa2.58□□□□□ -2
SMG1-207ENST00000563235 SPINK13Q1W4C9 94 aa2.58□□□□□ -2
SMG1-207ENST00000563235 LYNX1G3V0Z9 82 aa2.57□□□□□ -2
SMG1-207ENST00000563235 LYNX1P0DP58 116 aa2.57□□□□□ -2
SMG1-207ENST00000563235 PRB3Q04118 309 aaPredicted RBP2.57□□□□□ -2
SMG1-207ENST00000563235 WNK2Q9Y3S1 2297 aa2.57□□□□□ -2
SMG1-207ENST00000563235 TENM1Q9UKZ4 2725 aa2.57□□□□□ -2
SMG1-207ENST00000563235 IGKV2D-24A0A075B6R9 120 aa2.57□□□□□ -2
SMG1-207ENST00000563235 TOMM7Q9P0U1 55 aa2.57□□□□□ -2
SMG1-207ENST00000563235 GVQW2A0A096LPI5 108 aaPredicted RBP2.56□□□□□ -2
SMG1-207ENST00000563235 CMYA5Q8N3K9 4069 aa2.56□□□□□ -2
SMG1-207ENST00000563235 SACSQ9NZJ4 4579 aa2.56□□□□□ -2
SMG1-207ENST00000563235 SSBP3-AS1Q7Z2R9 100 aa2.55□□□□□ -2
SMG1-207ENST00000563235 K7EQZ3 153 aa2.54□□□□□ -2
SMG1-207ENST00000563235 KRTAP11-1Q8IUC1 163 aa2.54□□□□□ -2
SMG1-207ENST00000563235 CCL19Q99731 98 aa2.53□□□□□ -2
SMG1-207ENST00000563235 SVEP1Q4LDE5 3571 aa2.53□□□□□ -2
SMG1-207ENST00000563235 DEFB131BA0A096LNP1 70 aa2.52□□□□□ -2.01
SMG1-207ENST00000563235 Q6ZRN7 208 aaPredicted RBP2.52□□□□□ -2.01
SMG1-207ENST00000563235 CRIPTQ9P021 101 aa2.51□□□□□ -2.01
SMG1-207ENST00000563235 HRNRQ86YZ3 2850 aaPredicted RBP2.51□□□□□ -2.01
SMG1-207ENST00000563235 VWFP04275 2813 aa2.5□□□□□ -2.01
SMG1-207ENST00000563235 INE1O15225 51 aa2.5□□□□□ -2.01
SMG1-207ENST00000563235 ZANQ9Y493 2812 aa2.49□□□□□ -2.01
SMG1-207ENST00000563235 UBR4Q5T4S7 5183 aa2.49□□□□□ -2.01
SMG1-207ENST00000563235 Q6ZRX8 168 aa2.48□□□□□ -2.01
SMG1-207ENST00000563235 DEFB131AP59861 70 aa2.48□□□□□ -2.01
SMG1-207ENST00000563235 BRD3OSQ6XYD6 125 aa2.47□□□□□ -2.01
SMG1-207ENST00000563235 LYSTQ99698 3801 aa2.47□□□□□ -2.01
SMG1-207ENST00000563235 SPRR1AP35321 89 aa2.47□□□□□ -2.01
SMG1-207ENST00000563235 HECTD4Q9Y4D8 3996 aa2.47□□□□□ -2.01
SMG1-207ENST00000563235 TENM3Q9P273 2699 aa2.47□□□□□ -2.01
SMG1-207ENST00000563235 UNQ6190/PRO20217Q6UXQ8 127 aa2.46□□□□□ -2.02
SMG1-207ENST00000563235 TP53AIP1Q9HCN2 124 aa2.46□□□□□ -2.02
SMG1-207ENST00000563235 ALMS1Q8TCU4 4167 aa2.46□□□□□ -2.02
SMG1-207ENST00000563235 HTN1P15515 57 aa2.46□□□□□ -2.02
SMG1-207ENST00000563235 C6orf48Q9UBA6 75 aa2.45□□□□□ -2.02
SMG1-207ENST00000563235 H3BUX3 64 aa2.45□□□□□ -2.02
SMG1-207ENST00000563235 DNAH3Q8TD57 4116 aa2.45□□□□□ -2.02
SMG1-207ENST00000563235 MMP24-AS1A0A0U1RRL7 71 aa2.45□□□□□ -2.02
SMG1-207ENST00000563235 KIAA1109Q2LD37 5005 aa2.45□□□□□ -2.02
SMG1-207ENST00000563235 KRTAP13-2Q52LG2 175 aa2.45□□□□□ -2.02
SMG1-207ENST00000563235 CLPSL2Q6UWE3 100 aa2.45□□□□□ -2.02
SMG1-207ENST00000563235 WFDC13Q8IUB5 93 aa2.45□□□□□ -2.02
SMG1-207ENST00000563235 IGKV2-24A0A0C4DH68 120 aa2.44□□□□□ -2.02
SMG1-207ENST00000563235 DNAH9Q9NYC9 4486 aa2.44□□□□□ -2.02
SMG1-207ENST00000563235 PLAC4Q8WY50 150 aa2.44□□□□□ -2.02
SMG1-207ENST00000563235 ABCA13Q86UQ4 5058 aa2.44□□□□□ -2.02
SMG1-207ENST00000563235 NOP10Q9NPE3 64 aaKnown RBP2.43□□□□□ -2.02
SMG1-207ENST00000563235 TENM2Q9NT68 2774 aa2.43□□□□□ -2.02
SMG1-207ENST00000563235 WFDC10BQ8IUB3 73 aa2.42□□□□□ -2.02
SMG1-207ENST00000563235 DNAH7Q8WXX0 4024 aa2.42□□□□□ -2.02
SMG1-207ENST00000563235 LY6G6CO95867 125 aa2.42□□□□□ -2.02
SMG1-207ENST00000563235 NOTCH3Q9UM47 2321 aa2.42□□□□□ -2.02
SMG1-207ENST00000563235 IGFL1Q6UW32 110 aa2.41□□□□□ -2.02
SMG1-207ENST00000563235 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
SMG1-207ENST00000563235 KRTAP13-3Q3SY46 172 aa2.4□□□□□ -2.02
SMG1-207ENST00000563235 ANGP03950 147 aaKnown RBP2.4□□□□□ -2.03
SMG1-207ENST00000563235 C10orf99Q6UWK7 81 aa2.39□□□□□ -2.03
SMG1-207ENST00000563235 COL7A1Q02388 2944 aa2.39□□□□□ -2.03
SMG1-207ENST00000563235 PCOTHQ58A44 107 aa2.39□□□□□ -2.03
SMG1-207ENST00000563235 SPRR1BP22528 89 aa2.38□□□□□ -2.03
SMG1-207ENST00000563235 DEFB105AQ8NG35 78 aa2.38□□□□□ -2.03
SMG1-207ENST00000563235 PRO0255Q9UI72 69 aa2.38□□□□□ -2.03
SMG1-207ENST00000563235 FLG2Q5D862 2391 aaPredicted RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms