RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 ACYP2P14621 99 aa11.34□□□□□ -0.59
RAB40C-206ENST00000561781 KMT2CQ8NEZ4 4911 aaKnown RBP11.33□□□□□ -0.6
RAB40C-206ENST00000561781 MIR22HGQ0VDD5 57 aa11.32□□□□□ -0.6
RAB40C-206ENST00000561781 SRRM2Q9UQ35 2752 aaKnown RBP11.31□□□□□ -0.6
RAB40C-206ENST00000561781 C8orf17Q9NRJ1 99 aa11.3□□□□□ -0.6
RAB40C-206ENST00000561781 UQCR11O14957 56 aa11.29□□□□□ -0.6
RAB40C-206ENST00000561781 SPRR1BP22528 89 aa11.29□□□□□ -0.6
RAB40C-206ENST00000561781 DNAH1Q9P2D7 4330 aa11.27□□□□□ -0.61
RAB40C-206ENST00000561781 KMT2AQ03164 3969 aa11.26□□□□□ -0.61
RAB40C-206ENST00000561781 DNAH10OSP0CZ25 163 aa11.26□□□□□ -0.61
RAB40C-206ENST00000561781 HYDINQ4G0P3 5121 aa11.25□□□□□ -0.61
RAB40C-206ENST00000561781 ZNF706Q9Y5V0 76 aaPredicted RBP11.24□□□□□ -0.61
RAB40C-206ENST00000561781 A0A096LNI7 61 aa11.23□□□□□ -0.61
RAB40C-206ENST00000561781 C1orf134Q5TEV5 83 aa11.23□□□□□ -0.61
RAB40C-206ENST00000561781 SACSQ9NZJ4 4579 aa11.22□□□□□ -0.61
RAB40C-206ENST00000561781 MRPL34Q9BQ48 92 aaKnown RBP11.22□□□□□ -0.61
RAB40C-206ENST00000561781 Q96NJ1 140 aa11.2□□□□□ -0.62
RAB40C-206ENST00000561781 ALMS1Q8TCU4 4167 aa11.19□□□□□ -0.62
RAB40C-206ENST00000561781 NUPR2A6NF83 97 aa11.19□□□□□ -0.62
RAB40C-206ENST00000561781 A0A1B0GVX0 72 aa11.17□□□□□ -0.62
RAB40C-206ENST00000561781 VPS13DQ5THJ4 4388 aa11.17□□□□□ -0.62
RAB40C-206ENST00000561781 APLNQ9ULZ1 77 aa11.16□□□□□ -0.62
RAB40C-206ENST00000561781 IGHV6-1A0A0B4J1U7 121 aa11.15□□□□□ -0.62
RAB40C-206ENST00000561781 DMAC1Q96GE9 116 aa11.15□□□□□ -0.62
RAB40C-206ENST00000561781 ZNF861PO60384 105 aa11.15□□□□□ -0.63
RAB40C-206ENST00000561781 KRTAP11-1Q8IUC1 163 aa11.14□□□□□ -0.63
RAB40C-206ENST00000561781 RYR3Q15413 4870 aa11.13□□□□□ -0.63
RAB40C-206ENST00000561781 ROMO1P60602 79 aa11.12□□□□□ -0.63
RAB40C-206ENST00000561781 CDK2AP2O75956 126 aa11.11□□□□□ -0.63
RAB40C-206ENST00000561781 DNAH10Q8IVF4 4471 aa11.1□□□□□ -0.63
RAB40C-206ENST00000561781 LY6G6CO95867 125 aa11.08□□□□□ -0.64
RAB40C-206ENST00000561781 DNAH2Q9P225 4427 aa11.08□□□□□ -0.64
RAB40C-206ENST00000561781 RYR2Q92736 4967 aa11.07□□□□□ -0.64
RAB40C-206ENST00000561781 KRTAP13-3Q3SY46 172 aa11.05□□□□□ -0.64
RAB40C-206ENST00000561781 UBE2DNLQ8IWF7 75 aa11.04□□□□□ -0.64
RAB40C-206ENST00000561781 FRAS1Q86XX4 4008 aa11.03□□□□□ -0.64
RAB40C-206ENST00000561781 Q5W150 140 aa11.03□□□□□ -0.64
RAB40C-206ENST00000561781 KRTAP25-1Q3LHN0 102 aa11.01□□□□□ -0.65
RAB40C-206ENST00000561781 NOTCH2NLQ7Z3S9 236 aa11□□□□□ -0.65
RAB40C-206ENST00000561781 IGLV9-49A0A0B4J1Y8 123 aa10.99□□□□□ -0.65
RAB40C-206ENST00000561781 CHTF8P0CG12 524 aa10.99□□□□□ -0.65
RAB40C-206ENST00000561781 KRTAP1-5Q9BYS1 174 aa10.98□□□□□ -0.65
RAB40C-206ENST00000561781 IGLV7-43P04211 117 aa10.92□□□□□ -0.66
RAB40C-206ENST00000561781 DNAH6Q9C0G6 4158 aa10.89□□□□□ -0.67
RAB40C-206ENST00000561781 KRTAP13-1Q8IUC0 172 aa10.88□□□□□ -0.67
RAB40C-206ENST00000561781 FAT2Q9NYQ8 4349 aa10.88□□□□□ -0.67
RAB40C-206ENST00000561781 NBDYA0A0U1RRE5 68 aa10.86□□□□□ -0.67
RAB40C-206ENST00000561781 A8MUU9 505 aa10.84□□□□□ -0.67
RAB40C-206ENST00000561781 IGLV5-52A0A0A0MRZ9 124 aa10.84□□□□□ -0.67
RAB40C-206ENST00000561781 DNAH17Q9UFH2 4485 aa10.83□□□□□ -0.68
RAB40C-206ENST00000561781 PKHD1P08F94 4074 aa10.79□□□□□ -0.68
RAB40C-206ENST00000561781 FAM229AH3BQW9 127 aa10.79□□□□□ -0.68
RAB40C-206ENST00000561781 LINC00483Q53H64 154 aa10.78□□□□□ -0.68
RAB40C-206ENST00000561781 IGKV2-30P06310 120 aa10.77□□□□□ -0.68
RAB40C-206ENST00000561781 P0C880 135 aa10.76□□□□□ -0.69
RAB40C-206ENST00000561781 SPINK6Q6UWN8 80 aa10.76□□□□□ -0.69
RAB40C-206ENST00000561781 LINC00304Q8N9R0 145 aa10.76□□□□□ -0.69
RAB40C-206ENST00000561781 EPPK1P58107 5090 aaKnown RBP10.75□□□□□ -0.69
RAB40C-206ENST00000561781 PANO1I0J062 215 aa10.75□□□□□ -0.69
RAB40C-206ENST00000561781 DNAH11Q96DT5 4516 aa10.75□□□□□ -0.69
RAB40C-206ENST00000561781 PKD1P98161 4303 aa10.74□□□□□ -0.69
RAB40C-206ENST00000561781 Q6ZRN7 208 aaPredicted RBP10.72□□□□□ -0.69
RAB40C-206ENST00000561781 HECTD4Q9Y4D8 3996 aa10.71□□□□□ -0.69
RAB40C-206ENST00000561781 ANAPC11Q9NYG5 84 aa10.7□□□□□ -0.7
RAB40C-206ENST00000561781 C14orf177Q52M58 125 aa10.69□□□□□ -0.7
RAB40C-206ENST00000561781 DNAH5Q8TE73 4624 aa10.67□□□□□ -0.7
RAB40C-206ENST00000561781 H0YAA0 97 aa10.63□□□□□ -0.71
RAB40C-206ENST00000561781 IGKV2D-30A0A075B6S6 120 aa10.59□□□□□ -0.71
RAB40C-206ENST00000561781 Q6ZSA8 131 aa10.59□□□□□ -0.71
RAB40C-206ENST00000561781 A0A087WTM6 91 aa10.58□□□□□ -0.72
RAB40C-206ENST00000561781 KRTAP10-2P60368 255 aa10.58□□□□□ -0.72
RAB40C-206ENST00000561781 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.58□□□□□ -0.72
RAB40C-206ENST00000561781 LRP1BQ9NZR2 4599 aa10.57□□□□□ -0.72
RAB40C-206ENST00000561781 DYNC1H1Q14204 4646 aaKnown RBP10.56□□□□□ -0.72
RAB40C-206ENST00000561781 SPACA4Q8TDM5 124 aa10.54□□□□□ -0.72
RAB40C-206ENST00000561781 PSORS1C2Q9UIG4 136 aa10.52□□□□□ -0.73
RAB40C-206ENST00000561781 A0A1B0GVY2 172 aa10.51□□□□□ -0.73
RAB40C-206ENST00000561781 SPINK1P00995 79 aa10.51□□□□□ -0.73
RAB40C-206ENST00000561781 DNAH8Q96JB1 4490 aa10.51□□□□□ -0.73
RAB40C-206ENST00000561781 CIRBP-AS1Q8TBR5 109 aa10.5□□□□□ -0.73
RAB40C-206ENST00000561781 K7ERS5 55 aa10.46□□□□□ -0.73
RAB40C-206ENST00000561781 SSBP3-AS1Q7Z2R9 100 aa10.46□□□□□ -0.73
RAB40C-206ENST00000561781 A0A1B0GU33 70 aa10.46□□□□□ -0.74
RAB40C-206ENST00000561781 KRTAP16-1A8MUX0 517 aa10.46□□□□□ -0.74
RAB40C-206ENST00000561781 A0A0A0MQY5 61 aa10.45□□□□□ -0.74
RAB40C-206ENST00000561781 CRIPTQ9P021 101 aa10.45□□□□□ -0.74
RAB40C-206ENST00000561781 KIAA1109Q2LD37 5005 aa10.44□□□□□ -0.74
RAB40C-206ENST00000561781 SPINT4Q6UDR6 99 aa10.42□□□□□ -0.74
RAB40C-206ENST00000561781 APOBP04114 4563 aaKnown RBP10.42□□□□□ -0.74
RAB40C-206ENST00000561781 KRTAP10-1P60331 282 aa10.39□□□□□ -0.75
RAB40C-206ENST00000561781 C20orf166-AS1Q96NR2 134 aa10.38□□□□□ -0.75
RAB40C-206ENST00000561781 H1FX-AS1Q4G0G2 97 aa10.37□□□□□ -0.75
RAB40C-206ENST00000561781 FLG2Q5D862 2391 aaPredicted RBP10.36□□□□□ -0.75
RAB40C-206ENST00000561781 NDUFAF8A1L188 74 aa10.36□□□□□ -0.75
RAB40C-206ENST00000561781 FAT1Q14517 4588 aa10.34□□□□□ -0.75
RAB40C-206ENST00000561781 BIRC6Q9NR09 4857 aa10.34□□□□□ -0.75
RAB40C-206ENST00000561781 HSPG2P98160 4391 aa10.33□□□□□ -0.76
RAB40C-206ENST00000561781 TYMSOSQ8TAI1 123 aa10.33□□□□□ -0.76
RAB40C-206ENST00000561781 Q8N1X5 172 aa10.3□□□□□ -0.76
RAB40C-206ENST00000561781 RYR1P21817 5038 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms