RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 NPC2P61916 151 aa4.48□□□□□ -1.69
RABGGTA-217ENST00000560521 ETDBQ3ZM63 59 aa4.48□□□□□ -1.69
RABGGTA-217ENST00000560521 OR13C6PQ8NH95 151 aa4.48□□□□□ -1.69
RABGGTA-217ENST00000560521 NAA38Q9BRA0 125 aaKnown RBP4.48□□□□□ -1.69
RABGGTA-217ENST00000560521 TEX49A0A1B0GTD5 131 aa4.47□□□□□ -1.69
RABGGTA-217ENST00000560521 SMIM11BQ8TCY0 68 aa4.47□□□□□ -1.69
RABGGTA-217ENST00000560521 OBSCN-AS1Q96MR7 158 aa4.47□□□□□ -1.69
RABGGTA-217ENST00000560521 VPS25Q9BRG1 176 aa4.47□□□□□ -1.69
RABGGTA-217ENST00000560521 ORMDL1Q9P0S3 153 aa4.47□□□□□ -1.69
RABGGTA-217ENST00000560521 SCGB1A1P11684 91 aa4.46□□□□□ -1.7
RABGGTA-217ENST00000560521 A0A1B0GW54 56 aa4.45□□□□□ -1.7
RABGGTA-217ENST00000560521 ELOF1P60002 83 aaKnown RBP4.45□□□□□ -1.7
RABGGTA-217ENST00000560521 BAALC-AS2P0C853 105 aa4.44□□□□□ -1.7
RABGGTA-217ENST00000560521 COX7BP24311 80 aa4.44□□□□□ -1.7
RABGGTA-217ENST00000560521 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.44□□□□□ -1.7
RABGGTA-217ENST00000560521 hADV29S1A0JD25 119 aa4.43□□□□□ -1.7
RABGGTA-217ENST00000560521 MTURNQ8N3F0 131 aa4.43□□□□□ -1.7
RABGGTA-217ENST00000560521 C20orf166-AS1Q96NR2 134 aa4.43□□□□□ -1.7
RABGGTA-217ENST00000560521 IGLV5-48A0A075B6I7 105 aa4.42□□□□□ -1.7
RABGGTA-217ENST00000560521 C6orf99Q4VX62 202 aa4.42□□□□□ -1.7
RABGGTA-217ENST00000560521 LINC00575Q6W349 94 aa4.42□□□□□ -1.7
RABGGTA-217ENST00000560521 CLEC2BQ92478 149 aa4.42□□□□□ -1.7
RABGGTA-217ENST00000560521 Q96NJ1 140 aa4.42□□□□□ -1.7
RABGGTA-217ENST00000560521 SIGMAR1Q99720 223 aa4.42□□□□□ -1.7
RABGGTA-217ENST00000560521 IMUPQ9GZP8 106 aa4.42□□□□□ -1.7
RABGGTA-217ENST00000560521 KRTAP20-1Q3LI63 56 aa4.41□□□□□ -1.7
RABGGTA-217ENST00000560521 FAM236DA0A1B0GTK5 79 aa4.4□□□□□ -1.71
RABGGTA-217ENST00000560521 FAM236CP0DP71 79 aa4.4□□□□□ -1.71
RABGGTA-217ENST00000560521 A8MUU9 505 aa4.39□□□□□ -1.71
RABGGTA-217ENST00000560521 KRTAP16-1A8MUX0 517 aa4.39□□□□□ -1.71
RABGGTA-217ENST00000560521 ATP5EP2Q5VTU8 51 aa4.39□□□□□ -1.71
RABGGTA-217ENST00000560521 MUC12Q9UKN1 5478 aa4.38□□□□□ -1.71
RABGGTA-217ENST00000560521 MPLKIPQ8TAP9 179 aa4.38□□□□□ -1.71
RABGGTA-217ENST00000560521 LOC110117498A0A087WWA1 95 aa4.37□□□□□ -1.71
RABGGTA-217ENST00000560521 TRBV7-7A0A0K0K1E9 115 aa4.37□□□□□ -1.71
RABGGTA-217ENST00000560521 RBM3P98179 157 aaKnown RBP4.37□□□□□ -1.71
RABGGTA-217ENST00000560521 IGFL1Q6UW32 110 aa4.37□□□□□ -1.71
RABGGTA-217ENST00000560521 LINC00643Q86TS7 51 aa4.37□□□□□ -1.71
RABGGTA-217ENST00000560521 FAM218AQ96MZ4 157 aa4.37□□□□□ -1.71
RABGGTA-217ENST00000560521 DSCR8Q96T75 97 aa4.37□□□□□ -1.71
RABGGTA-217ENST00000560521 NEBP20929 6669 aa4.37□□□□□ -1.71
RABGGTA-217ENST00000560521 HRES1P13985 223 aa4.36□□□□□ -1.71
RABGGTA-217ENST00000560521 CCKP06307 115 aa4.35□□□□□ -1.71
RABGGTA-217ENST00000560521 UBL5Q9BZL1 73 aa4.34□□□□□ -1.71
RABGGTA-217ENST00000560521 Q6ZQY7 126 aa4.33□□□□□ -1.72
RABGGTA-217ENST00000560521 RBM12B-AS1Q9P1G2 102 aa4.33□□□□□ -1.72
RABGGTA-217ENST00000560521 F8WEM9 126 aa4.31□□□□□ -1.72
RABGGTA-217ENST00000560521 Q6JHZ5 121 aa4.31□□□□□ -1.72
RABGGTA-217ENST00000560521 TRBV7-4A0A0J9YYF1 115 aa4.3□□□□□ -1.72
RABGGTA-217ENST00000560521 NDUFV3P56181 108 aaKnown RBP4.3□□□□□ -1.72
RABGGTA-217ENST00000560521 NOTCH2NLQ7Z3S9 236 aa4.3□□□□□ -1.72
RABGGTA-217ENST00000560521 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
RABGGTA-217ENST00000560521 A0A1B0GV72 72 aa4.29□□□□□ -1.72
RABGGTA-217ENST00000560521 CXCL6P80162 114 aa4.29□□□□□ -1.72
RABGGTA-217ENST00000560521 Q6ZQT0 140 aa4.29□□□□□ -1.72
RABGGTA-217ENST00000560521 Q8N9P0 234 aaPredicted RBP4.29□□□□□ -1.72
RABGGTA-217ENST00000560521 C14orf132Q9NPU4 83 aa4.29□□□□□ -1.72
RABGGTA-217ENST00000560521 PCP4P48539 62 aa4.28□□□□□ -1.72
RABGGTA-217ENST00000560521 DSCR10P59022 87 aa4.28□□□□□ -1.72
RABGGTA-217ENST00000560521 SMIM20Q8N5G0 67 aa4.27□□□□□ -1.73
RABGGTA-217ENST00000560521 A8MWP4 228 aa4.25□□□□□ -1.73
RABGGTA-217ENST00000560521 ATOX1O00244 68 aa4.24□□□□□ -1.73
RABGGTA-217ENST00000560521 MT-ATP8P03928 68 aa4.24□□□□□ -1.73
RABGGTA-217ENST00000560521 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
RABGGTA-217ENST00000560521 NREPQ16612 68 aa4.22□□□□□ -1.73
RABGGTA-217ENST00000560521 SVIPQ8NHG7 77 aa4.22□□□□□ -1.73
RABGGTA-217ENST00000560521 SS18L2Q9UHA2 77 aa4.22□□□□□ -1.73
RABGGTA-217ENST00000560521 LINC00313P59037 77 aa4.21□□□□□ -1.74
RABGGTA-217ENST00000560521 ANAPC13Q9BS18 74 aa4.21□□□□□ -1.74
RABGGTA-217ENST00000560521 KRTAP2-3P0C7H8 128 aa4.2□□□□□ -1.74
RABGGTA-217ENST00000560521 KRTAP2-4Q9BYR9 128 aa4.2□□□□□ -1.74
RABGGTA-217ENST00000560521 J3KT08 172 aa4.19□□□□□ -1.74
RABGGTA-217ENST00000560521 HIST1H4AP62805 103 aaKnown RBP4.19□□□□□ -1.74
RABGGTA-217ENST00000560521 Q6ZVQ6 151 aa4.19□□□□□ -1.74
RABGGTA-217ENST00000560521 A6NN06 94 aa4.18□□□□□ -1.74
RABGGTA-217ENST00000560521 A0A087WSZ3 146 aa4.17□□□□□ -1.74
RABGGTA-217ENST00000560521 FAM236AA0A1B0GUQ0 79 aa4.17□□□□□ -1.74
RABGGTA-217ENST00000560521 FAM236BA0A1B0GV22 79 aa4.17□□□□□ -1.74
RABGGTA-217ENST00000560521 BPY2O14599 106 aa4.17□□□□□ -1.74
RABGGTA-217ENST00000560521 UQCRQO14949 82 aa4.17□□□□□ -1.74
RABGGTA-217ENST00000560521 KRTAP4-12Q9BQ66 201 aa4.15□□□□□ -1.75
RABGGTA-217ENST00000560521 SERP2Q8N6R1 65 aa4.14□□□□□ -1.75
RABGGTA-217ENST00000560521 KMT2DO14686 5537 aa4.13□□□□□ -1.75
RABGGTA-217ENST00000560521 MDN1Q9NU22 5596 aa4.13□□□□□ -1.75
RABGGTA-217ENST00000560521 COX7CP15954 63 aa4.13□□□□□ -1.75
RABGGTA-217ENST00000560521 SPINK7P58062 85 aa4.13□□□□□ -1.75
RABGGTA-217ENST00000560521 A0A1W2PNM2 257 aa4.12□□□□□ -1.75
RABGGTA-217ENST00000560521 NDUFC1O43677 76 aa4.12□□□□□ -1.75
RABGGTA-217ENST00000560521 NDUFB1O75438 58 aa4.12□□□□□ -1.75
RABGGTA-217ENST00000560521 IGKV4-1P06312 121 aa4.12□□□□□ -1.75
RABGGTA-217ENST00000560521 TRAV7A0A075B6U4 112 aa4.11□□□□□ -1.75
RABGGTA-217ENST00000560521 IGKV3D-7A0A0C4DH55 119 aa4.11□□□□□ -1.75
RABGGTA-217ENST00000560521 MT1BP07438 61 aa4.11□□□□□ -1.75
RABGGTA-217ENST00000560521 DEFB116Q30KQ4 102 aa4.09□□□□□ -1.75
RABGGTA-217ENST00000560521 ZCCHC13Q8WW36 166 aaKnown RBP4.09□□□□□ -1.75
RABGGTA-217ENST00000560521 IGHV6-1A0A0B4J1U7 121 aa4.08□□□□□ -1.76
RABGGTA-217ENST00000560521 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
RABGGTA-217ENST00000560521 LCE3BQ5TA77 95 aa4.08□□□□□ -1.76
RABGGTA-217ENST00000560521 WFDC13Q8IUB5 93 aa4.08□□□□□ -1.76
RABGGTA-217ENST00000560521 H3BPC8 53 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms