RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 LCE3CQ5T5A8 94 aa4.78□□□□□ -1.64
SPG11-212ENST00000558790 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.78□□□□□ -1.64
SPG11-212ENST00000558790 SS18L2Q9UHA2 77 aa4.78□□□□□ -1.64
SPG11-212ENST00000558790 PPDPFLQ8WWR9 84 aa4.77□□□□□ -1.65
SPG11-212ENST00000558790 KRTAP5-11Q6L8G4 156 aa4.76□□□□□ -1.65
SPG11-212ENST00000558790 SNHG12Q9BXW3 62 aa4.76□□□□□ -1.65
SPG11-212ENST00000558790 HRES1P13985 223 aa4.75□□□□□ -1.65
SPG11-212ENST00000558790 A0A087WSZ3 146 aa4.74□□□□□ -1.65
SPG11-212ENST00000558790 C12orf57Q99622 126 aa4.74□□□□□ -1.65
SPG11-212ENST00000558790 SIGMAR1Q99720 223 aa4.74□□□□□ -1.65
SPG11-212ENST00000558790 RBM12B-AS1Q9P1G2 102 aa4.74□□□□□ -1.65
SPG11-212ENST00000558790 COA6Q5JTJ3 125 aaKnown RBP4.73□□□□□ -1.65
SPG11-212ENST00000558790 BVES-AS1Q5T3Y7 98 aa4.73□□□□□ -1.65
SPG11-212ENST00000558790 TEN1Q86WV5 123 aa4.73□□□□□ -1.65
SPG11-212ENST00000558790 MDN1Q9NU22 5596 aa4.72□□□□□ -1.65
SPG11-212ENST00000558790 LINC00846Q9NV44 126 aa4.7□□□□□ -1.66
SPG11-212ENST00000558790 LINC00313P59037 77 aa4.69□□□□□ -1.66
SPG11-212ENST00000558790 KMT2DO14686 5537 aa4.68□□□□□ -1.66
SPG11-212ENST00000558790 A0A1W2PNM2 257 aa4.67□□□□□ -1.66
SPG11-212ENST00000558790 H3BMG7 143 aa4.66□□□□□ -1.66
SPG11-212ENST00000558790 IGKV4-1P06312 121 aa4.66□□□□□ -1.66
SPG11-212ENST00000558790 S100A1P23297 94 aa4.65□□□□□ -1.67
SPG11-212ENST00000558790 HIST1H4GQ99525 98 aa4.65□□□□□ -1.67
SPG11-212ENST00000558790 HSBP1L1C9JCN9 74 aa4.64□□□□□ -1.67
SPG11-212ENST00000558790 IGHV6-1A0A0B4J1U7 121 aa4.63□□□□□ -1.67
SPG11-212ENST00000558790 DEFB116Q30KQ4 102 aa4.63□□□□□ -1.67
SPG11-212ENST00000558790 KRTAP2-3P0C7H8 128 aa4.62□□□□□ -1.67
SPG11-212ENST00000558790 FABP2P12104 132 aa4.62□□□□□ -1.67
SPG11-212ENST00000558790 MTURNQ8N3F0 131 aa4.62□□□□□ -1.67
SPG11-212ENST00000558790 KRTAP2-4Q9BYR9 128 aa4.62□□□□□ -1.67
SPG11-212ENST00000558790 A0A1B0GV72 72 aa4.61□□□□□ -1.67
SPG11-212ENST00000558790 H0YGX0 51 aa4.61□□□□□ -1.67
SPG11-212ENST00000558790 SNCGO76070 127 aa4.61□□□□□ -1.67
SPG11-212ENST00000558790 RAB37Q96AX2 223 aa4.61□□□□□ -1.67
SPG11-212ENST00000558790 HIST1H2BLQ99880 126 aa4.61□□□□□ -1.67
SPG11-212ENST00000558790 TRBV7-4A0A0J9YYF1 115 aa4.6□□□□□ -1.67
SPG11-212ENST00000558790 A8MWP4 228 aa4.6□□□□□ -1.67
SPG11-212ENST00000558790 HIST3H2BBQ8N257 126 aa4.6□□□□□ -1.67
SPG11-212ENST00000558790 LINC00472Q9H8W2 130 aa4.6□□□□□ -1.67
SPG11-212ENST00000558790 A0A0B4J2C4 111 aa4.59□□□□□ -1.67
SPG11-212ENST00000558790 COX8AP10176 69 aa4.58□□□□□ -1.68
SPG11-212ENST00000558790 SPINK7P58062 85 aa4.58□□□□□ -1.68
SPG11-212ENST00000558790 ZCCHC13Q8WW36 166 aaKnown RBP4.58□□□□□ -1.68
SPG11-212ENST00000558790 A0A1B0GVX0 72 aa4.57□□□□□ -1.68
SPG11-212ENST00000558790 A0A1B0GX51 115 aa4.57□□□□□ -1.68
SPG11-212ENST00000558790 ANKRD29Q8N6D5 301 aa4.57□□□□□ -1.68
SPG11-212ENST00000558790 C8orf87E5RJ46 101 aa4.56□□□□□ -1.68
SPG11-212ENST00000558790 S100A2P29034 98 aa4.56□□□□□ -1.68
SPG11-212ENST00000558790 WFDC13Q8IUB5 93 aa4.56□□□□□ -1.68
SPG11-212ENST00000558790 GPR98Q8WXG9 6306 aa4.56□□□□□ -1.68
SPG11-212ENST00000558790 TRACP01848 142 aa4.55□□□□□ -1.68
SPG11-212ENST00000558790 CCKP06307 115 aa4.55□□□□□ -1.68
SPG11-212ENST00000558790 DLEU1O43261 78 aa4.54□□□□□ -1.68
SPG11-212ENST00000558790 CXCL6P80162 114 aa4.53□□□□□ -1.68
SPG11-212ENST00000558790 ORMDL1Q9P0S3 153 aa4.53□□□□□ -1.68
SPG11-212ENST00000558790 DNAL4O96015 105 aa4.52□□□□□ -1.69
SPG11-212ENST00000558790 C2orf91Q6ZV80 131 aa4.52□□□□□ -1.69
SPG11-212ENST00000558790 C14orf144Q96I85 54 aa4.52□□□□□ -1.69
SPG11-212ENST00000558790 HIGD1BQ9P298 99 aa4.52□□□□□ -1.69
SPG11-212ENST00000558790 PRO1854Q9UHT4 67 aa4.52□□□□□ -1.69
SPG11-212ENST00000558790 KRTAP5-9P26371 169 aa4.5□□□□□ -1.69
SPG11-212ENST00000558790 CEND1Q8N111 149 aa4.5□□□□□ -1.69
SPG11-212ENST00000558790 VPS25Q9BRG1 176 aa4.5□□□□□ -1.69
SPG11-212ENST00000558790 FXYD2P54710 66 aa4.49□□□□□ -1.69
SPG11-212ENST00000558790 H3BQ85 93 aa4.48□□□□□ -1.69
SPG11-212ENST00000558790 TMEM256-PLSCR3K7ERE1 68 aa4.48□□□□□ -1.69
SPG11-212ENST00000558790 SPATA45Q537H7 98 aa4.47□□□□□ -1.69
SPG11-212ENST00000558790 J3KT08 172 aa4.46□□□□□ -1.7
SPG11-212ENST00000558790 S100A6P06703 90 aa4.46□□□□□ -1.7
SPG11-212ENST00000558790 K7ERJ3 54 aa4.45□□□□□ -1.7
SPG11-212ENST00000558790 PSMB2P49721 201 aa4.45□□□□□ -1.7
SPG11-212ENST00000558790 LYRM7Q5U5X0 104 aa4.45□□□□□ -1.7
SPG11-212ENST00000558790 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
SPG11-212ENST00000558790 H1FX-AS1Q4G0G2 97 aa4.44□□□□□ -1.7
SPG11-212ENST00000558790 C8orf17Q9NRJ1 99 aa4.44□□□□□ -1.7
SPG11-212ENST00000558790 RBM3P98179 157 aaKnown RBP4.43□□□□□ -1.7
SPG11-212ENST00000558790 IGKV3D-7A0A0C4DH55 119 aa4.42□□□□□ -1.7
SPG11-212ENST00000558790 A6NN06 94 aa4.42□□□□□ -1.7
SPG11-212ENST00000558790 KRTAP9-6A8MVA2 160 aa4.42□□□□□ -1.7
SPG11-212ENST00000558790 NDUFB1O75438 58 aa4.42□□□□□ -1.7
SPG11-212ENST00000558790 Q6ZQT0 140 aa4.42□□□□□ -1.7
SPG11-212ENST00000558790 DSCR8Q96T75 97 aa4.42□□□□□ -1.7
SPG11-212ENST00000558790 VAMP8Q9BV40 100 aa4.42□□□□□ -1.7
SPG11-212ENST00000558790 KRTAP2-1Q9BYU5 128 aa4.42□□□□□ -1.7
SPG11-212ENST00000558790 COX6CP09669 75 aa4.4□□□□□ -1.71
SPG11-212ENST00000558790 A8MU10 97 aa4.39□□□□□ -1.71
SPG11-212ENST00000558790 MT1BP07438 61 aa4.39□□□□□ -1.71
SPG11-212ENST00000558790 C9JAW5 83 aa4.38□□□□□ -1.71
SPG11-212ENST00000558790 HSD52Q0P140 79 aa4.38□□□□□ -1.71
SPG11-212ENST00000558790 LCE3EQ5T5B0 92 aa4.38□□□□□ -1.71
SPG11-212ENST00000558790 LOC105371267A0A1B0GV96 52 aa4.37□□□□□ -1.71
SPG11-212ENST00000558790 MMP24-AS1A0A0U1RRL7 71 aa4.36□□□□□ -1.71
SPG11-212ENST00000558790 Q5VV11 94 aa4.35□□□□□ -1.71
SPG11-212ENST00000558790 MRPL34Q9BQ48 92 aaKnown RBP4.35□□□□□ -1.71
SPG11-212ENST00000558790 PRR15Q8IV56 129 aa4.34□□□□□ -1.71
SPG11-212ENST00000558790 TMEM254Q8TBM7 123 aa4.34□□□□□ -1.71
SPG11-212ENST00000558790 FAM236AA0A1B0GUQ0 79 aa4.33□□□□□ -1.72
SPG11-212ENST00000558790 FAM236BA0A1B0GV22 79 aa4.33□□□□□ -1.72
SPG11-212ENST00000558790 BAALC-AS2P0C853 105 aa4.33□□□□□ -1.72
SPG11-212ENST00000558790 KRTAP19-8Q3LI54 63 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms