RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 J3QR89 54 aa6.7□□□□□ -1.34
SLIRP-209ENST00000557342 FAM240AA0A1B0GVK7 77 aa6.69□□□□□ -1.34
SLIRP-209ENST00000557342 A0A1B0GW54 56 aa6.69□□□□□ -1.34
SLIRP-209ENST00000557342 IGKV4-1P06312 121 aa6.69□□□□□ -1.34
SLIRP-209ENST00000557342 SIGMAR1Q99720 223 aa6.69□□□□□ -1.34
SLIRP-209ENST00000557342 Q75L30 129 aa6.68□□□□□ -1.34
SLIRP-209ENST00000557342 LINC00472Q9H8W2 130 aa6.67□□□□□ -1.34
SLIRP-209ENST00000557342 K7ERU9 68 aa6.66□□□□□ -1.34
SLIRP-209ENST00000557342 ACYP1P07311 99 aa6.66□□□□□ -1.34
SLIRP-209ENST00000557342 ATP11AUNQ6ZP68 121 aa6.65□□□□□ -1.34
SLIRP-209ENST00000557342 DSCR10P59022 87 aa6.63□□□□□ -1.35
SLIRP-209ENST00000557342 LINC00313P59037 77 aa6.63□□□□□ -1.35
SLIRP-209ENST00000557342 DEFB116Q30KQ4 102 aa6.63□□□□□ -1.35
SLIRP-209ENST00000557342 LCE2AQ5TA79 106 aaPredicted RBP6.63□□□□□ -1.35
SLIRP-209ENST00000557342 C20orf166-AS1Q96NR2 134 aa6.63□□□□□ -1.35
SLIRP-209ENST00000557342 J3KT08 172 aa6.62□□□□□ -1.35
SLIRP-209ENST00000557342 KRTAP9-6A0A140TA67 174 aa6.61□□□□□ -1.35
SLIRP-209ENST00000557342 A8MUU9 505 aa6.61□□□□□ -1.35
SLIRP-209ENST00000557342 LINC00846Q9NV44 126 aa6.6□□□□□ -1.35
SLIRP-209ENST00000557342 FAT4Q6V0I7 4981 aa6.59□□□□□ -1.35
SLIRP-209ENST00000557342 IGHV6-1A0A0B4J1U7 121 aa6.58□□□□□ -1.36
SLIRP-209ENST00000557342 C8orf87E5RJ46 101 aa6.58□□□□□ -1.36
SLIRP-209ENST00000557342 A0A1B0GVX0 72 aa6.57□□□□□ -1.36
SLIRP-209ENST00000557342 UBL5Q9BZL1 73 aa6.57□□□□□ -1.36
SLIRP-209ENST00000557342 KRTAP16-1A8MUX0 517 aa6.56□□□□□ -1.36
SLIRP-209ENST00000557342 NDUFB1O75438 58 aa6.56□□□□□ -1.36
SLIRP-209ENST00000557342 Q6ZVQ6 151 aa6.56□□□□□ -1.36
SLIRP-209ENST00000557342 NREPQ16612 68 aa6.55□□□□□ -1.36
SLIRP-209ENST00000557342 NOTCH2NLQ7Z3S9 236 aa6.55□□□□□ -1.36
SLIRP-209ENST00000557342 KRTAP19-2Q3LHN2 52 aa6.53□□□□□ -1.36
SLIRP-209ENST00000557342 A8MWP4 228 aa6.52□□□□□ -1.37
SLIRP-209ENST00000557342 LCE2CQ5TA81 110 aa6.52□□□□□ -1.37
SLIRP-209ENST00000557342 LINC00643Q86TS7 51 aa6.52□□□□□ -1.37
SLIRP-209ENST00000557342 ATP5EP2Q5VTU8 51 aa6.51□□□□□ -1.37
SLIRP-209ENST00000557342 COX6B2Q6YFQ2 88 aa6.5□□□□□ -1.37
SLIRP-209ENST00000557342 CXCL6P80162 114 aa6.49□□□□□ -1.37
SLIRP-209ENST00000557342 BPY2O14599 106 aa6.48□□□□□ -1.37
SLIRP-209ENST00000557342 IGKV3D-7A0A0C4DH55 119 aa6.47□□□□□ -1.37
SLIRP-209ENST00000557342 C8orf17Q9NRJ1 99 aa6.47□□□□□ -1.37
SLIRP-209ENST00000557342 PRR15Q8IV56 129 aa6.46□□□□□ -1.38
SLIRP-209ENST00000557342 MT1HP80294 61 aa6.45□□□□□ -1.38
SLIRP-209ENST00000557342 Q8N9P0 234 aaPredicted RBP6.44□□□□□ -1.38
SLIRP-209ENST00000557342 MT-ATP8P03928 68 aa6.42□□□□□ -1.38
SLIRP-209ENST00000557342 ZCCHC13Q8WW36 166 aaKnown RBP6.42□□□□□ -1.38
SLIRP-209ENST00000557342 K7EQZ3 153 aa6.4□□□□□ -1.38
SLIRP-209ENST00000557342 IMUPQ9GZP8 106 aa6.4□□□□□ -1.38
SLIRP-209ENST00000557342 MMP24-AS1A0A0U1RRL7 71 aa6.39□□□□□ -1.39
SLIRP-209ENST00000557342 TMEM254Q8TBM7 123 aa6.39□□□□□ -1.39
SLIRP-209ENST00000557342 M0R2T5 61 aa6.38□□□□□ -1.39
SLIRP-209ENST00000557342 Q8N9L7 120 aa6.38□□□□□ -1.39
SLIRP-209ENST00000557342 MRPL34Q9BQ48 92 aaKnown RBP6.38□□□□□ -1.39
SLIRP-209ENST00000557342 hDV103S1A0JD37 113 aa6.37□□□□□ -1.39
SLIRP-209ENST00000557342 HIST1H4AP62805 103 aaKnown RBP6.36□□□□□ -1.39
SLIRP-209ENST00000557342 RBM12B-AS1Q9P1G2 102 aa6.36□□□□□ -1.39
SLIRP-209ENST00000557342 FAM236DA0A1B0GTK5 79 aa6.34□□□□□ -1.39
SLIRP-209ENST00000557342 FAM236CP0DP71 79 aa6.34□□□□□ -1.39
SLIRP-209ENST00000557342 HRES1P13985 223 aa6.34□□□□□ -1.39
SLIRP-209ENST00000557342 A0A087WVE0 104 aa6.32□□□□□ -1.4
SLIRP-209ENST00000557342 HCG22E2RYF7 251 aa6.32□□□□□ -1.4
SLIRP-209ENST00000557342 NDUFS5O43920 106 aa6.32□□□□□ -1.4
SLIRP-209ENST00000557342 SPINK7P58062 85 aa6.32□□□□□ -1.4
SLIRP-209ENST00000557342 KRTAP10-6P60371 365 aaPredicted RBP6.32□□□□□ -1.4
SLIRP-209ENST00000557342 MPLKIPQ8TAP9 179 aa6.31□□□□□ -1.4
SLIRP-209ENST00000557342 LORP23490 312 aaPredicted RBP6.3□□□□□ -1.4
SLIRP-209ENST00000557342 CASC2Q6XLA1 102 aa6.3□□□□□ -1.4
SLIRP-209ENST00000557342 WFDC13Q8IUB5 93 aa6.29□□□□□ -1.4
SLIRP-209ENST00000557342 FLGP20930 4061 aaPredicted RBP6.28□□□□□ -1.4
SLIRP-209ENST00000557342 FAM236AA0A1B0GUQ0 79 aa6.26□□□□□ -1.41
SLIRP-209ENST00000557342 FAM236BA0A1B0GV22 79 aa6.26□□□□□ -1.41
SLIRP-209ENST00000557342 CRCT1Q9UGL9 99 aa6.26□□□□□ -1.41
SLIRP-209ENST00000557342 FSIP2Q5CZC0 6907 aa6.25□□□□□ -1.41
SLIRP-209ENST00000557342 SCGB1A1P11684 91 aa6.23□□□□□ -1.41
SLIRP-209ENST00000557342 ATOX1O00244 68 aa6.2□□□□□ -1.42
SLIRP-209ENST00000557342 Q5W150 140 aa6.2□□□□□ -1.42
SLIRP-209ENST00000557342 C7orf65Q6ZTY9 151 aa6.19□□□□□ -1.42
SLIRP-209ENST00000557342 IGKV2D-30A0A075B6S6 120 aa6.18□□□□□ -1.42
SLIRP-209ENST00000557342 IGKV2-30P06310 120 aa6.18□□□□□ -1.42
SLIRP-209ENST00000557342 SMIM20Q8N5G0 67 aa6.18□□□□□ -1.42
SLIRP-209ENST00000557342 TP53AIP1Q9HCN2 124 aa6.18□□□□□ -1.42
SLIRP-209ENST00000557342 OCR1Q9BZK8 76 aa6.17□□□□□ -1.42
SLIRP-209ENST00000557342 TRAV7A0A075B6U4 112 aa6.14□□□□□ -1.43
SLIRP-209ENST00000557342 UQCRQO14949 82 aa6.14□□□□□ -1.43
SLIRP-209ENST00000557342 KRTAP9-8Q9BYQ0 159 aa6.12□□□□□ -1.43
SLIRP-209ENST00000557342 H1FX-AS1Q4G0G2 97 aa6.1□□□□□ -1.43
SLIRP-209ENST00000557342 SERP2Q8N6R1 65 aa6.1□□□□□ -1.43
SLIRP-209ENST00000557342 TRAV22A0A0B4J277 110 aa6.09□□□□□ -1.43
SLIRP-209ENST00000557342 C5orf47Q569G3 176 aa6.08□□□□□ -1.44
SLIRP-209ENST00000557342 ANAPC13Q9BS18 74 aa6.08□□□□□ -1.44
SLIRP-209ENST00000557342 H0Y9P7 68 aa6.06□□□□□ -1.44
SLIRP-209ENST00000557342 H3BPC8 53 aa6.05□□□□□ -1.44
SLIRP-209ENST00000557342 MT2AP02795 61 aa6.05□□□□□ -1.44
SLIRP-209ENST00000557342 COX7CP15954 63 aa6.05□□□□□ -1.44
SLIRP-209ENST00000557342 C4orf26Q17RF5 130 aa6.05□□□□□ -1.44
SLIRP-209ENST00000557342 MP68P56378 58 aa6.04□□□□□ -1.44
SLIRP-209ENST00000557342 LOC101927531A0A1B0GV80 90 aa6.01□□□□□ -1.45
SLIRP-209ENST00000557342 KRTAP10-10P60014 251 aa6.01□□□□□ -1.45
SLIRP-209ENST00000557342 MT1FP04733 61 aa6□□□□□ -1.45
SLIRP-209ENST00000557342 LINC00208Q96KT6 92 aa5.99□□□□□ -1.45
SLIRP-209ENST00000557342 C20orf197Q8N268 126 aa5.98□□□□□ -1.45
SLIRP-209ENST00000557342 C1orf64Q8NEQ6 169 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms