RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 FAM236DA0A1B0GTK5 79 aa2.38□□□□□ -2.03
HIF1A-209ENST00000556827 LST1O00453 97 aa2.38□□□□□ -2.03
HIF1A-209ENST00000556827 SNCGO76070 127 aa2.38□□□□□ -2.03
HIF1A-209ENST00000556827 FAM236CP0DP71 79 aa2.38□□□□□ -2.03
HIF1A-209ENST00000556827 SPANXA2-OT1Q8N9U9 137 aa2.38□□□□□ -2.03
HIF1A-209ENST00000556827 YPEL4Q96NS1 127 aa2.38□□□□□ -2.03
HIF1A-209ENST00000556827 SNHG12Q9BXW3 62 aa2.38□□□□□ -2.03
HIF1A-209ENST00000556827 SS18L2Q9UHA2 77 aa2.38□□□□□ -2.03
HIF1A-209ENST00000556827 MUC17Q685J3 4493 aa2.37□□□□□ -2.03
HIF1A-209ENST00000556827 TRBV7-7A0A0K0K1E9 115 aa2.37□□□□□ -2.03
HIF1A-209ENST00000556827 hADV29S1A0JD25 119 aa2.37□□□□□ -2.03
HIF1A-209ENST00000556827 OCIAD2Q56VL3 154 aa2.37□□□□□ -2.03
HIF1A-209ENST00000556827 CLEC2BQ92478 149 aa2.37□□□□□ -2.03
HIF1A-209ENST00000556827 LINC01545Q5VT33 79 aa2.36□□□□□ -2.03
HIF1A-209ENST00000556827 Q6ZQY7 126 aa2.36□□□□□ -2.03
HIF1A-209ENST00000556827 MUSTN1Q8IVN3 82 aa2.36□□□□□ -2.03
HIF1A-209ENST00000556827 SMIM11BQ8TCY0 68 aa2.36□□□□□ -2.03
HIF1A-209ENST00000556827 C12orf57Q99622 126 aa2.36□□□□□ -2.03
HIF1A-209ENST00000556827 RBM12B-AS1Q9P1G2 102 aa2.36□□□□□ -2.03
HIF1A-209ENST00000556827 KRTDAPP60985 99 aa2.35□□□□□ -2.03
HIF1A-209ENST00000556827 LINC00575Q6W349 94 aa2.35□□□□□ -2.03
HIF1A-209ENST00000556827 PPDPFLQ8WWR9 84 aa2.35□□□□□ -2.03
HIF1A-209ENST00000556827 TTTY13Q9BZ97 58 aa2.35□□□□□ -2.03
HIF1A-209ENST00000556827 BVES-AS1Q5T3Y7 98 aa2.34□□□□□ -2.03
HIF1A-209ENST00000556827 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.34□□□□□ -2.03
HIF1A-209ENST00000556827 C3orf79P0CE67 100 aa2.33□□□□□ -2.04
HIF1A-209ENST00000556827 SPINT4Q6UDR6 99 aa2.33□□□□□ -2.04
HIF1A-209ENST00000556827 TEN1Q86WV5 123 aa2.33□□□□□ -2.04
HIF1A-209ENST00000556827 H3BUT2 72 aa2.32□□□□□ -2.04
HIF1A-209ENST00000556827 C20orf166-AS1Q96NR2 134 aa2.32□□□□□ -2.04
HIF1A-209ENST00000556827 HSBP1L1C9JCN9 74 aa2.31□□□□□ -2.04
HIF1A-209ENST00000556827 HIST1H2BKO60814 126 aa2.31□□□□□ -2.04
HIF1A-209ENST00000556827 HIST1H2BJP06899 126 aa2.31□□□□□ -2.04
HIF1A-209ENST00000556827 HIST1H2BOP23527 126 aa2.31□□□□□ -2.04
HIF1A-209ENST00000556827 HIST1H2BBP33778 126 aa2.31□□□□□ -2.04
HIF1A-209ENST00000556827 HIST1H2BDP58876 126 aa2.31□□□□□ -2.04
HIF1A-209ENST00000556827 LINC00313P59037 77 aa2.31□□□□□ -2.04
HIF1A-209ENST00000556827 HIST1H2BCP62807 126 aa2.31□□□□□ -2.04
HIF1A-209ENST00000556827 HIST2H2BEQ16778 126 aa2.31□□□□□ -2.04
HIF1A-209ENST00000556827 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.31□□□□□ -2.04
HIF1A-209ENST00000556827 ATOH7Q8N100 152 aa2.31□□□□□ -2.04
HIF1A-209ENST00000556827 HIST1H2BHQ93079 126 aa2.31□□□□□ -2.04
HIF1A-209ENST00000556827 SIGMAR1Q99720 223 aa2.31□□□□□ -2.04
HIF1A-209ENST00000556827 HIST1H2BNQ99877 126 aa2.31□□□□□ -2.04
HIF1A-209ENST00000556827 HIST1H2BMQ99879 126 aa2.31□□□□□ -2.04
HIF1A-209ENST00000556827 A0A087WSZ3 146 aa2.3□□□□□ -2.04
HIF1A-209ENST00000556827 MT2AP02795 61 aa2.3□□□□□ -2.04
HIF1A-209ENST00000556827 C1orf64Q8NEQ6 169 aa2.3□□□□□ -2.04
HIF1A-209ENST00000556827 H0YGX0 51 aa2.29□□□□□ -2.04
HIF1A-209ENST00000556827 H3BMG7 143 aa2.29□□□□□ -2.04
HIF1A-209ENST00000556827 P0C880 135 aa2.29□□□□□ -2.04
HIF1A-209ENST00000556827 FABP2P12104 132 aa2.29□□□□□ -2.04
HIF1A-209ENST00000556827 LUZP6Q538Z0 58 aa2.29□□□□□ -2.04
HIF1A-209ENST00000556827 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
HIF1A-209ENST00000556827 RAB37Q96AX2 223 aa2.28□□□□□ -2.04
HIF1A-209ENST00000556827 MT1FP04733 61 aa2.27□□□□□ -2.05
HIF1A-209ENST00000556827 S100A2P29034 98 aa2.27□□□□□ -2.05
HIF1A-209ENST00000556827 LYRM7Q5U5X0 104 aa2.27□□□□□ -2.05
HIF1A-209ENST00000556827 ANKRD29Q8N6D5 301 aa2.27□□□□□ -2.05
HIF1A-209ENST00000556827 IGHV6-1A0A0B4J1U7 121 aa2.26□□□□□ -2.05
HIF1A-209ENST00000556827 A8MWP4 228 aa2.26□□□□□ -2.05
HIF1A-209ENST00000556827 H3BQ85 93 aa2.26□□□□□ -2.05
HIF1A-209ENST00000556827 TRBV7-4A0A0J9YYF1 115 aa2.25□□□□□ -2.05
HIF1A-209ENST00000556827 A0A1B0GX51 115 aa2.25□□□□□ -2.05
HIF1A-209ENST00000556827 DNAL4O96015 105 aa2.25□□□□□ -2.05
HIF1A-209ENST00000556827 TRACP01848 142 aa2.25□□□□□ -2.05
HIF1A-209ENST00000556827 HRES1P13985 223 aa2.25□□□□□ -2.05
HIF1A-209ENST00000556827 C8orf87E5RJ46 101 aa2.24□□□□□ -2.05
HIF1A-209ENST00000556827 KRTAP19-6Q3LI70 58 aa2.24□□□□□ -2.05
HIF1A-209ENST00000556827 A0A1W2PNM2 257 aa2.23□□□□□ -2.05
HIF1A-209ENST00000556827 TMEM256-PLSCR3K7ERE1 68 aa2.23□□□□□ -2.05
HIF1A-209ENST00000556827 NDUFB1O75438 58 aa2.23□□□□□ -2.05
HIF1A-209ENST00000556827 CCKP06307 115 aa2.23□□□□□ -2.05
HIF1A-209ENST00000556827 SPINK7P58062 85 aa2.23□□□□□ -2.05
HIF1A-209ENST00000556827 ADM2Q7Z4H4 148 aa2.23□□□□□ -2.05
HIF1A-209ENST00000556827 DSCR8Q96T75 97 aa2.23□□□□□ -2.05
HIF1A-209ENST00000556827 ORMDL1Q9P0S3 153 aa2.23□□□□□ -2.05
HIF1A-209ENST00000556827 A0A0B4J2C4 111 aa2.22□□□□□ -2.05
HIF1A-209ENST00000556827 A0A1B0GV72 72 aa2.22□□□□□ -2.05
HIF1A-209ENST00000556827 J3KT08 172 aa2.22□□□□□ -2.05
HIF1A-209ENST00000556827 S100A6P06703 90 aa2.22□□□□□ -2.05
HIF1A-209ENST00000556827 COX6CP09669 75 aa2.22□□□□□ -2.05
HIF1A-209ENST00000556827 PSMB2P49721 201 aa2.22□□□□□ -2.05
HIF1A-209ENST00000556827 KRTAP12-3P60328 96 aa2.22□□□□□ -2.05
HIF1A-209ENST00000556827 ZCCHC13Q8WW36 166 aaKnown RBP2.22□□□□□ -2.05
HIF1A-209ENST00000556827 VPS25Q9BRG1 176 aa2.22□□□□□ -2.05
HIF1A-209ENST00000556827 PRO1854Q9UHT4 67 aa2.22□□□□□ -2.05
HIF1A-209ENST00000556827 DLEU1O43261 78 aa2.21□□□□□ -2.06
HIF1A-209ENST00000556827 COX8AP10176 69 aa2.21□□□□□ -2.06
HIF1A-209ENST00000556827 KRTAP6-3Q3LI67 103 aa2.21□□□□□ -2.06
HIF1A-209ENST00000556827 HIST1H2BLQ99880 126 aa2.21□□□□□ -2.06
HIF1A-209ENST00000556827 LINC00472Q9H8W2 130 aa2.21□□□□□ -2.06
HIF1A-209ENST00000556827 S100A1P23297 94 aa2.2□□□□□ -2.06
HIF1A-209ENST00000556827 WFDC13Q8IUB5 93 aa2.2□□□□□ -2.06
HIF1A-209ENST00000556827 C14orf144Q96I85 54 aa2.2□□□□□ -2.06
HIF1A-209ENST00000556827 FCGBPQ9Y6R7 5405 aaPredicted RBP2.19□□□□□ -2.06
HIF1A-209ENST00000556827 RBM3P98179 157 aaKnown RBP2.19□□□□□ -2.06
HIF1A-209ENST00000556827 HIST3H2BBQ8N257 126 aa2.19□□□□□ -2.06
HIF1A-209ENST00000556827 HIGD1BQ9P298 99 aa2.19□□□□□ -2.06
HIF1A-209ENST00000556827 IGKV3D-7A0A0C4DH55 119 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms