RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 Q6ZQT0 140 aa2.46□□□□□ -2.02
PCNX1-212ENST00000556516 IMUPQ9GZP8 106 aa2.46□□□□□ -2.02
PCNX1-212ENST00000556516 PLECQ15149 4684 aaKnown RBP2.46□□□□□ -2.02
PCNX1-212ENST00000556516 DYNC2H1Q8NCM8 4307 aaKnown RBP2.46□□□□□ -2.02
PCNX1-212ENST00000556516 TGP01266 2768 aa2.45□□□□□ -2.02
PCNX1-212ENST00000556516 A0A1B0GV72 72 aa2.45□□□□□ -2.02
PCNX1-212ENST00000556516 ATP5EP2Q5VTU8 51 aa2.45□□□□□ -2.02
PCNX1-212ENST00000556516 SPINK6Q6UWN8 80 aa2.45□□□□□ -2.02
PCNX1-212ENST00000556516 SSBP3-AS1Q7Z2R9 100 aa2.45□□□□□ -2.02
PCNX1-212ENST00000556516 KRTAP13-1Q8IUC0 172 aa2.45□□□□□ -2.02
PCNX1-212ENST00000556516 SPRR4Q96PI1 79 aa2.45□□□□□ -2.02
PCNX1-212ENST00000556516 CSMD3Q7Z407 3707 aa2.45□□□□□ -2.02
PCNX1-212ENST00000556516 PRKDCP78527 4128 aaKnown RBP2.44□□□□□ -2.02
PCNX1-212ENST00000556516 A8MUU9 505 aa2.44□□□□□ -2.02
PCNX1-212ENST00000556516 SCGB1A1P11684 91 aa2.44□□□□□ -2.02
PCNX1-212ENST00000556516 CRYGAP11844 174 aa2.44□□□□□ -2.02
PCNX1-212ENST00000556516 HAMPP81172 84 aa2.44□□□□□ -2.02
PCNX1-212ENST00000556516 FAM229BQ4G0N7 80 aa2.44□□□□□ -2.02
PCNX1-212ENST00000556516 C9orf153Q5TBE3 101 aa2.44□□□□□ -2.02
PCNX1-212ENST00000556516 Q6Q795 121 aa2.44□□□□□ -2.02
PCNX1-212ENST00000556516 LINC00846Q9NV44 126 aa2.44□□□□□ -2.02
PCNX1-212ENST00000556516 PRO0628Q9UI54 55 aa2.44□□□□□ -2.02
PCNX1-212ENST00000556516 STARD9Q9P2P6 4700 aa2.44□□□□□ -2.02
PCNX1-212ENST00000556516 DNAH7Q8WXX0 4024 aa2.43□□□□□ -2.02
PCNX1-212ENST00000556516 IGHV6-1A0A0B4J1U7 121 aa2.43□□□□□ -2.02
PCNX1-212ENST00000556516 LUZP6Q538Z0 58 aa2.43□□□□□ -2.02
PCNX1-212ENST00000556516 C3orf22Q8N5N4 141 aa2.43□□□□□ -2.02
PCNX1-212ENST00000556516 SS18L2Q9UHA2 77 aa2.43□□□□□ -2.02
PCNX1-212ENST00000556516 TRBV7-7A0A0K0K1E9 115 aa2.42□□□□□ -2.02
PCNX1-212ENST00000556516 CD164Q04900 197 aa2.42□□□□□ -2.02
PCNX1-212ENST00000556516 A0A1W2PNM2 257 aa2.41□□□□□ -2.02
PCNX1-212ENST00000556516 J3KT08 172 aa2.41□□□□□ -2.02
PCNX1-212ENST00000556516 NDUFB1O75438 58 aa2.41□□□□□ -2.02
PCNX1-212ENST00000556516 MT-ATP8P03928 68 aa2.41□□□□□ -2.02
PCNX1-212ENST00000556516 HIST1H4AP62805 103 aaKnown RBP2.41□□□□□ -2.02
PCNX1-212ENST00000556516 VPS13DQ5THJ4 4388 aa2.41□□□□□ -2.02
PCNX1-212ENST00000556516 A0A087WSZ3 146 aa2.4□□□□□ -2.03
PCNX1-212ENST00000556516 SMR3BP02814 79 aaPredicted RBP2.4□□□□□ -2.03
PCNX1-212ENST00000556516 SPAG11AQ6PDA7 123 aa2.4□□□□□ -2.03
PCNX1-212ENST00000556516 IGKV3D-7A0A0C4DH55 119 aa2.39□□□□□ -2.03
PCNX1-212ENST00000556516 SMIM20Q8N5G0 67 aa2.39□□□□□ -2.03
PCNX1-212ENST00000556516 LIMD2Q9BT23 127 aa2.39□□□□□ -2.03
PCNX1-212ENST00000556516 DNAH1Q9P2D7 4330 aa2.39□□□□□ -2.03
PCNX1-212ENST00000556516 LYSTQ99698 3801 aa2.38□□□□□ -2.03
PCNX1-212ENST00000556516 SPINK1P00995 79 aa2.38□□□□□ -2.03
PCNX1-212ENST00000556516 ANAPC13Q9BS18 74 aa2.38□□□□□ -2.03
PCNX1-212ENST00000556516 KMT2AQ03164 3969 aa2.37□□□□□ -2.03
PCNX1-212ENST00000556516 ATOX1O00244 68 aa2.37□□□□□ -2.03
PCNX1-212ENST00000556516 ASB16-AS1Q495Z4 193 aa2.37□□□□□ -2.03
PCNX1-212ENST00000556516 Q5XG85 94 aa2.37□□□□□ -2.03
PCNX1-212ENST00000556516 HRCT1Q6UXD1 115 aa2.37□□□□□ -2.03
PCNX1-212ENST00000556516 ALMS1Q8TCU4 4167 aa2.37□□□□□ -2.03
PCNX1-212ENST00000556516 A8MWP4 228 aa2.36□□□□□ -2.03
PCNX1-212ENST00000556516 IGKV4-1P06312 121 aa2.36□□□□□ -2.03
PCNX1-212ENST00000556516 RPS29P62273 56 aaKnown RBP2.36□□□□□ -2.03
PCNX1-212ENST00000556516 LINC00472Q9H8W2 130 aa2.36□□□□□ -2.03
PCNX1-212ENST00000556516 DNAH10Q8IVF4 4471 aa2.36□□□□□ -2.03
PCNX1-212ENST00000556516 A0A0G2JQZ4 141 aa2.35□□□□□ -2.03
PCNX1-212ENST00000556516 FAM236AA0A1B0GUQ0 79 aa2.35□□□□□ -2.03
PCNX1-212ENST00000556516 FAM236BA0A1B0GV22 79 aa2.35□□□□□ -2.03
PCNX1-212ENST00000556516 Q5VSD8 79 aa2.35□□□□□ -2.03
PCNX1-212ENST00000556516 PRR15Q8IV56 129 aa2.35□□□□□ -2.03
PCNX1-212ENST00000556516 LINC00304Q8N9R0 145 aa2.35□□□□□ -2.03
PCNX1-212ENST00000556516 HCG22E2RYF7 251 aa2.34□□□□□ -2.03
PCNX1-212ENST00000556516 SPANXA2-OT1Q8N9U9 137 aa2.34□□□□□ -2.03
PCNX1-212ENST00000556516 DNAH6Q9C0G6 4158 aa2.34□□□□□ -2.03
PCNX1-212ENST00000556516 DNAH17Q9UFH2 4485 aa2.34□□□□□ -2.03
PCNX1-212ENST00000556516 DNAH2Q9P225 4427 aa2.33□□□□□ -2.04
PCNX1-212ENST00000556516 A0A087WVE0 104 aa2.33□□□□□ -2.04
PCNX1-212ENST00000556516 C8orf87E5RJ46 101 aa2.33□□□□□ -2.04
PCNX1-212ENST00000556516 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
PCNX1-212ENST00000556516 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
PCNX1-212ENST00000556516 CASC2Q6XLA1 102 aa2.33□□□□□ -2.04
PCNX1-212ENST00000556516 SERP2Q8N6R1 65 aa2.33□□□□□ -2.04
PCNX1-212ENST00000556516 TP53AIP1Q9HCN2 124 aa2.33□□□□□ -2.04
PCNX1-212ENST00000556516 RBM12B-AS1Q9P1G2 102 aa2.33□□□□□ -2.04
PCNX1-212ENST00000556516 TRAV7A0A075B6U4 112 aa2.32□□□□□ -2.04
PCNX1-212ENST00000556516 hDV103S1A0JD37 113 aa2.32□□□□□ -2.04
PCNX1-212ENST00000556516 K7EQZ3 153 aa2.32□□□□□ -2.04
PCNX1-212ENST00000556516 UQCRQO14949 82 aa2.32□□□□□ -2.04
PCNX1-212ENST00000556516 KRTAP10-4P60372 401 aaPredicted RBP2.32□□□□□ -2.04
PCNX1-212ENST00000556516 HECTD4Q9Y4D8 3996 aa2.32□□□□□ -2.04
PCNX1-212ENST00000556516 COX7CP15954 63 aa2.31□□□□□ -2.04
PCNX1-212ENST00000556516 MP68P56378 58 aa2.31□□□□□ -2.04
PCNX1-212ENST00000556516 LINC00313P59037 77 aa2.31□□□□□ -2.04
PCNX1-212ENST00000556516 C1orf195Q5TG92 126 aa2.31□□□□□ -2.04
PCNX1-212ENST00000556516 HYDINQ4G0P3 5121 aa2.31□□□□□ -2.04
PCNX1-212ENST00000556516 WFDC13Q8IUB5 93 aa2.3□□□□□ -2.04
PCNX1-212ENST00000556516 TMEM254Q8TBM7 123 aa2.3□□□□□ -2.04
PCNX1-212ENST00000556516 Q96NJ1 140 aa2.3□□□□□ -2.04
PCNX1-212ENST00000556516 DNAH5Q8TE73 4624 aa2.29□□□□□ -2.04
PCNX1-212ENST00000556516 H3BPC8 53 aa2.29□□□□□ -2.04
PCNX1-212ENST00000556516 K7ERS5 55 aa2.29□□□□□ -2.04
PCNX1-212ENST00000556516 NDUFC1O43677 76 aa2.29□□□□□ -2.04
PCNX1-212ENST00000556516 MRPL34Q9BQ48 92 aaKnown RBP2.29□□□□□ -2.04
PCNX1-212ENST00000556516 RYR2Q92736 4967 aa2.29□□□□□ -2.04
PCNX1-212ENST00000556516 SACSQ9NZJ4 4579 aa2.29□□□□□ -2.04
PCNX1-212ENST00000556516 DNAH11Q96DT5 4516 aa2.29□□□□□ -2.04
PCNX1-212ENST00000556516 SPINT4Q6UDR6 99 aa2.28□□□□□ -2.04
PCNX1-212ENST00000556516 FP248Q71RG6 208 aaPredicted RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms