RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 PPLO60437 1756 aa-1.01□□□□□ -2.57
SCFD1-218ENST00000556256 ITPR2Q14571 2701 aa-1.01□□□□□ -2.57
SCFD1-218ENST00000556256 SMG1Q96Q15 3661 aaKnown RBP-1.01□□□□□ -2.57
SCFD1-218ENST00000556256 CEBPZOSA8MTT3 80 aa-1.01□□□□□ -2.57
SCFD1-218ENST00000556256 NDUFB1O75438 58 aa-1.01□□□□□ -2.57
SCFD1-218ENST00000556256 MGAQ8IWI9 3026 aa-1.01□□□□□ -2.57
SCFD1-218ENST00000556256 PIK3C2BO00750 1634 aa-1.01□□□□□ -2.57
SCFD1-218ENST00000556256 RICTORQ6R327 1708 aa-1.01□□□□□ -2.57
SCFD1-218ENST00000556256 UMAD1C9J7I0 102 aa-1.02□□□□□ -2.57
SCFD1-218ENST00000556256 NDUFA4O00483 81 aa-1.02□□□□□ -2.57
SCFD1-218ENST00000556256 ZC3H13Q5T200 1668 aaKnown RBP-1.02□□□□□ -2.57
SCFD1-218ENST00000556256 RABAC1Q9UI14 185 aa-1.02□□□□□ -2.57
SCFD1-218ENST00000556256 ITSN2Q9NZM3 1697 aa-1.03□□□□□ -2.57
SCFD1-218ENST00000556256 URB2Q14146 1524 aaKnown RBP-1.03□□□□□ -2.57
SCFD1-218ENST00000556256 IFI27P40305 119 aaPredicted RBP-1.03□□□□□ -2.57
SCFD1-218ENST00000556256 SNRPFP62306 86 aaKnown RBP-1.03□□□□□ -2.57
SCFD1-218ENST00000556256 LINC00643Q86TS7 51 aa-1.03□□□□□ -2.57
SCFD1-218ENST00000556256 PKIAP61925 76 aa-1.04□□□□□ -2.58
SCFD1-218ENST00000556256 PYY3Q5JQD4 70 aa-1.04□□□□□ -2.58
SCFD1-218ENST00000556256 S100A16Q96FQ6 103 aaKnown RBP-1.04□□□□□ -2.58
SCFD1-218ENST00000556256 CDC42BPAQ5VT25 1732 aa-1.04□□□□□ -2.58
SCFD1-218ENST00000556256 CFAP43Q8NDM7 1665 aa-1.04□□□□□ -2.58
SCFD1-218ENST00000556256 CFAP46Q8IYW2 2715 aa-1.04□□□□□ -2.58
SCFD1-218ENST00000556256 VPS8Q8N3P4 1428 aa-1.05□□□□□ -2.58
SCFD1-218ENST00000556256 NREPQ16612 68 aa-1.05□□□□□ -2.58
SCFD1-218ENST00000556256 KIF14Q15058 1648 aa-1.05□□□□□ -2.58
SCFD1-218ENST00000556256 LY75O60449 1722 aa-1.06□□□□□ -2.58
SCFD1-218ENST00000556256 MMP24-AS1A0A0U1RRL7 71 aa-1.06□□□□□ -2.58
SCFD1-218ENST00000556256 MT1EP04732 61 aa-1.06□□□□□ -2.58
SCFD1-218ENST00000556256 CRIP1P50238 77 aa-1.06□□□□□ -2.58
SCFD1-218ENST00000556256 WT1-ASQ06250 92 aa-1.06□□□□□ -2.58
SCFD1-218ENST00000556256 CLPSL2Q6UWE3 100 aa-1.06□□□□□ -2.58
SCFD1-218ENST00000556256 KRTAP8-1Q8IUC2 63 aa-1.06□□□□□ -2.58
SCFD1-218ENST00000556256 KIF1AQ12756 1690 aa-1.07□□□□□ -2.58
SCFD1-218ENST00000556256 CCNB3Q8WWL7 1395 aa-1.07□□□□□ -2.58
SCFD1-218ENST00000556256 MAP3K4Q9Y6R4 1608 aa-1.07□□□□□ -2.58
SCFD1-218ENST00000556256 IGLV5-48A0A075B6I7 105 aa-1.07□□□□□ -2.58
SCFD1-218ENST00000556256 DEFB131BA0A096LNP1 70 aa-1.07□□□□□ -2.58
SCFD1-218ENST00000556256 RPS27P42677 84 aaKnown RBP-1.07□□□□□ -2.58
SCFD1-218ENST00000556256 TDRG1Q3Y452 100 aa-1.07□□□□□ -2.58
SCFD1-218ENST00000556256 RPS27LQ71UM5 84 aaKnown RBP-1.07□□□□□ -2.58
SCFD1-218ENST00000556256 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-1.07□□□□□ -2.58
SCFD1-218ENST00000556256 NRAPQ86VF7 1730 aa-1.07□□□□□ -2.58
SCFD1-218ENST00000556256 CCDC88BA6NC98 1476 aa-1.07□□□□□ -2.58
SCFD1-218ENST00000556256 RNF17Q9BXT8 1623 aaKnown RBP-1.07□□□□□ -2.58
SCFD1-218ENST00000556256 KIAA0586Q9BVV6 1533 aa-1.08□□□□□ -2.58
SCFD1-218ENST00000556256 S100A8P05109 93 aa-1.08□□□□□ -2.58
SCFD1-218ENST00000556256 TNP1P09430 55 aa-1.08□□□□□ -2.58
SCFD1-218ENST00000556256 KRTAP19-6Q3LI70 58 aa-1.08□□□□□ -2.58
SCFD1-218ENST00000556256 DMXL2Q8TDJ6 3036 aa-1.09□□□□□ -2.58
SCFD1-218ENST00000556256 MYO15AQ9UKN7 3530 aa-1.09□□□□□ -2.58
SCFD1-218ENST00000556256 HMGA1P17096 107 aaKnown RBP-1.09□□□□□ -2.58
SCFD1-218ENST00000556256 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.09□□□□□ -2.58
SCFD1-218ENST00000556256 ABCC3O15438 1527 aa-1.1□□□□□ -2.58
SCFD1-218ENST00000556256 MT1LQ93083 61 aa-1.1□□□□□ -2.59
SCFD1-218ENST00000556256 ARHGAP35Q9NRY4 1499 aa-1.11□□□□□ -2.59
SCFD1-218ENST00000556256 LRRIQ1Q96JM4 1722 aa-1.11□□□□□ -2.59
SCFD1-218ENST00000556256 SMIM13P0DJ93 91 aa-1.11□□□□□ -2.59
SCFD1-218ENST00000556256 MT1HL1P0DM35 61 aa-1.11□□□□□ -2.59
SCFD1-218ENST00000556256 MT1GP13640 62 aa-1.11□□□□□ -2.59
SCFD1-218ENST00000556256 NCBP2-AS2Q69YL0 99 aa-1.11□□□□□ -2.59
SCFD1-218ENST00000556256 KCNQ1DNQ9H478 68 aa-1.11□□□□□ -2.59
SCFD1-218ENST00000556256 Q9H521 79 aa-1.11□□□□□ -2.59
SCFD1-218ENST00000556256 THOC2Q8NI27 1593 aaKnown RBP-1.12□□□□□ -2.59
SCFD1-218ENST00000556256 A0A087WXM4 84 aa-1.12□□□□□ -2.59
SCFD1-218ENST00000556256 PVALEFA0A1B0GWK0 134 aa-1.12□□□□□ -2.59
SCFD1-218ENST00000556256 DEFB121Q5J5C9 76 aa-1.12□□□□□ -2.59
SCFD1-218ENST00000556256 V9GYS6 101 aa-1.12□□□□□ -2.59
SCFD1-218ENST00000556256 ATMQ13315 3056 aa-1.12□□□□□ -2.59
SCFD1-218ENST00000556256 TTC37Q6PGP7 1564 aa-1.13□□□□□ -2.59
SCFD1-218ENST00000556256 CSMD2Q7Z408 3487 aa-1.13□□□□□ -2.59
SCFD1-218ENST00000556256 KANTRA0A1W2PQU2 76 aa-1.13□□□□□ -2.59
SCFD1-218ENST00000556256 MRPL33O75394 65 aaKnown RBP-1.13□□□□□ -2.59
SCFD1-218ENST00000556256 MINOS1Q5TGZ0 78 aa-1.13□□□□□ -2.59
SCFD1-218ENST00000556256 ATP5EP2Q5VTU8 51 aa-1.13□□□□□ -2.59
SCFD1-218ENST00000556256 NHSQ6T4R5 1651 aa-1.13□□□□□ -2.59
SCFD1-218ENST00000556256 SFTA3P0C7M3 94 aa-1.14□□□□□ -2.59
SCFD1-218ENST00000556256 UBL5Q9BZL1 73 aa-1.14□□□□□ -2.59
SCFD1-218ENST00000556256 INO80Q9ULG1 1556 aaPredicted RBP-1.14□□□□□ -2.59
SCFD1-218ENST00000556256 MAST1Q9Y2H9 1570 aa-1.14□□□□□ -2.59
SCFD1-218ENST00000556256 KDM5DQ9BY66 1539 aa-1.15□□□□□ -2.59
SCFD1-218ENST00000556256 MYO5CQ9NQX4 1742 aa-1.15□□□□□ -2.59
SCFD1-218ENST00000556256 HFM1A2PYH4 1435 aa-1.15□□□□□ -2.59
SCFD1-218ENST00000556256 A0A1B0GUL6 1792 aa-1.16□□□□□ -2.59
SCFD1-218ENST00000556256 CD163L1Q9NR16 1453 aa-1.16□□□□□ -2.59
SCFD1-218ENST00000556256 H3BUT2 72 aa-1.16□□□□□ -2.6
SCFD1-218ENST00000556256 BVES-AS1Q5T3Y7 98 aa-1.16□□□□□ -2.6
SCFD1-218ENST00000556256 ENHOQ6UWT2 76 aa-1.16□□□□□ -2.6
SCFD1-218ENST00000556256 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.16□□□□□ -2.6
SCFD1-218ENST00000556256 ASXL1Q8IXJ9 1541 aa-1.16□□□□□ -2.6
SCFD1-218ENST00000556256 RALGAPBQ86X10 1494 aa-1.17□□□□□ -2.6
SCFD1-218ENST00000556256 ETDCA0A1B0GVM5 59 aa-1.17□□□□□ -2.6
SCFD1-218ENST00000556256 FCER1GP30273 86 aa-1.17□□□□□ -2.6
SCFD1-218ENST00000556256 ST20Q9HBF5 79 aa-1.17□□□□□ -2.6
SCFD1-218ENST00000556256 C6orf48Q9UBA6 75 aa-1.17□□□□□ -2.6
SCFD1-218ENST00000556256 H3BUA1 57 aa-1.18□□□□□ -2.6
SCFD1-218ENST00000556256 NOP10Q9NPE3 64 aaKnown RBP-1.18□□□□□ -2.6
SCFD1-218ENST00000556256 UACAQ9BZF9 1416 aa-1.18□□□□□ -2.6
SCFD1-218ENST00000556256 CDC42BPGQ6DT37 1551 aa-1.18□□□□□ -2.6
SCFD1-218ENST00000556256 ZFHX4Q86UP3 3567 aa-1.18□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms