RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 KRTAP4-16G5E9R7 235 aaPredicted RBP3.81□□□□□ -1.8
PSEN1-216ENST00000556066 DNAL4O96015 105 aa3.81□□□□□ -1.8
PSEN1-216ENST00000556066 MT-ATP8P03928 68 aa3.81□□□□□ -1.8
PSEN1-216ENST00000556066 SPRR1AP35321 89 aa3.81□□□□□ -1.8
PSEN1-216ENST00000556066 ANAPC13Q9BS18 74 aa3.81□□□□□ -1.8
PSEN1-216ENST00000556066 ERC2-IT1O76042 136 aa3.8□□□□□ -1.8
PSEN1-216ENST00000556066 MOBPQ13875 183 aa3.8□□□□□ -1.8
PSEN1-216ENST00000556066 HRCT1Q6UXD1 115 aa3.8□□□□□ -1.8
PSEN1-216ENST00000556066 LINC00575Q6W349 94 aa3.8□□□□□ -1.8
PSEN1-216ENST00000556066 OCR1Q9BZK8 76 aa3.8□□□□□ -1.8
PSEN1-216ENST00000556066 ORMDL1Q9P0S3 153 aa3.8□□□□□ -1.8
PSEN1-216ENST00000556066 TRAV23DV6A0A075B6W5 121 aa3.79□□□□□ -1.8
PSEN1-216ENST00000556066 SPINK1P00995 79 aa3.79□□□□□ -1.8
PSEN1-216ENST00000556066 LINC00483Q53H64 154 aa3.79□□□□□ -1.8
PSEN1-216ENST00000556066 FP248Q71RG6 208 aaPredicted RBP3.79□□□□□ -1.8
PSEN1-216ENST00000556066 hADV29S1A0JD25 119 aa3.78□□□□□ -1.8
PSEN1-216ENST00000556066 ZNF73O43830 326 aaPredicted RBP3.78□□□□□ -1.8
PSEN1-216ENST00000556066 Q6ZRX8 168 aa3.78□□□□□ -1.8
PSEN1-216ENST00000556066 OBSCN-AS1Q96MR7 158 aa3.78□□□□□ -1.8
PSEN1-216ENST00000556066 Q9BRP9 147 aa3.78□□□□□ -1.8
PSEN1-216ENST00000556066 C14orf132Q9NPU4 83 aa3.78□□□□□ -1.8
PSEN1-216ENST00000556066 MUC17Q685J3 4493 aa3.78□□□□□ -1.8
PSEN1-216ENST00000556066 COX7BP24311 80 aa3.77□□□□□ -1.81
PSEN1-216ENST00000556066 NDUFV3P56181 108 aaKnown RBP3.77□□□□□ -1.81
PSEN1-216ENST00000556066 KRTAP13-3Q3SY46 172 aa3.77□□□□□ -1.81
PSEN1-216ENST00000556066 C9orf153Q5TBE3 101 aa3.77□□□□□ -1.81
PSEN1-216ENST00000556066 Q5XG85 94 aa3.77□□□□□ -1.81
PSEN1-216ENST00000556066 PRR15Q8IV56 129 aa3.77□□□□□ -1.81
PSEN1-216ENST00000556066 SNCGO76070 127 aa3.76□□□□□ -1.81
PSEN1-216ENST00000556066 ACYP1P07311 99 aa3.76□□□□□ -1.81
PSEN1-216ENST00000556066 ELOF1P60002 83 aaKnown RBP3.76□□□□□ -1.81
PSEN1-216ENST00000556066 SSBP3-AS1Q7Z2R9 100 aa3.76□□□□□ -1.81
PSEN1-216ENST00000556066 CRCT1Q9UGL9 99 aa3.76□□□□□ -1.81
PSEN1-216ENST00000556066 TRBV7-6A0A0J9YX20 115 aa3.75□□□□□ -1.81
PSEN1-216ENST00000556066 TMEM256-PLSCR3K7ERE1 68 aa3.75□□□□□ -1.81
PSEN1-216ENST00000556066 Q6ZQY7 126 aa3.75□□□□□ -1.81
PSEN1-216ENST00000556066 Q8N377 158 aa3.75□□□□□ -1.81
PSEN1-216ENST00000556066 ST20-AS1Q8NBB2 130 aa3.75□□□□□ -1.81
PSEN1-216ENST00000556066 JMJD7-PLA2G4BH0Y9G9 81 aa3.74□□□□□ -1.81
PSEN1-216ENST00000556066 CCKP06307 115 aa3.74□□□□□ -1.81
PSEN1-216ENST00000556066 ASB16-AS1Q495Z4 193 aa3.74□□□□□ -1.81
PSEN1-216ENST00000556066 IGKV2-30P06310 120 aa3.73□□□□□ -1.81
PSEN1-216ENST00000556066 RPS29P62273 56 aaKnown RBP3.73□□□□□ -1.81
PSEN1-216ENST00000556066 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
PSEN1-216ENST00000556066 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.73□□□□□ -1.81
PSEN1-216ENST00000556066 KTN1-AS1Q86SY8 53 aa3.73□□□□□ -1.81
PSEN1-216ENST00000556066 PRAC1Q96KF2 57 aa3.73□□□□□ -1.81
PSEN1-216ENST00000556066 A8MUN3 132 aa3.72□□□□□ -1.81
PSEN1-216ENST00000556066 LINC00313P59037 77 aa3.72□□□□□ -1.81
PSEN1-216ENST00000556066 RBM3P98179 157 aaKnown RBP3.72□□□□□ -1.81
PSEN1-216ENST00000556066 LINC00643Q86TS7 51 aa3.72□□□□□ -1.81
PSEN1-216ENST00000556066 LINC00846Q9NV44 126 aa3.72□□□□□ -1.81
PSEN1-216ENST00000556066 LINC01547P58512 204 aaPredicted RBP3.71□□□□□ -1.82
PSEN1-216ENST00000556066 Q6ZQT0 140 aa3.71□□□□□ -1.82
PSEN1-216ENST00000556066 DEFB105AQ8NG35 78 aa3.71□□□□□ -1.82
PSEN1-216ENST00000556066 KRTAP4-1Q9BYQ7 146 aa3.71□□□□□ -1.82
PSEN1-216ENST00000556066 DHRS4-AS1Q9P1J3 65 aa3.71□□□□□ -1.82
PSEN1-216ENST00000556066 TRBV7-7A0A0K0K1E9 115 aa3.7□□□□□ -1.82
PSEN1-216ENST00000556066 A0A1B0GW54 56 aa3.7□□□□□ -1.82
PSEN1-216ENST00000556066 H3BQ85 93 aa3.7□□□□□ -1.82
PSEN1-216ENST00000556066 KRTAP10-7P60409 375 aaPredicted RBP3.7□□□□□ -1.82
PSEN1-216ENST00000556066 Q8N9P0 234 aaPredicted RBP3.7□□□□□ -1.82
PSEN1-216ENST00000556066 LOC110117498A0A087WWA1 95 aa3.69□□□□□ -1.82
PSEN1-216ENST00000556066 IGKV3D-7A0A0C4DH55 119 aa3.69□□□□□ -1.82
PSEN1-216ENST00000556066 Q6JHZ5 121 aa3.69□□□□□ -1.82
PSEN1-216ENST00000556066 LCA10Q71F78 164 aa3.69□□□□□ -1.82
PSEN1-216ENST00000556066 LIMD2Q9BT23 127 aa3.69□□□□□ -1.82
PSEN1-216ENST00000556066 C9orf92A6NGG3 77 aa3.68□□□□□ -1.82
PSEN1-216ENST00000556066 SPRR1BP22528 89 aa3.68□□□□□ -1.82
PSEN1-216ENST00000556066 DSCR8Q96T75 97 aa3.68□□□□□ -1.82
PSEN1-216ENST00000556066 TRBV7-4A0A0J9YYF1 115 aa3.67□□□□□ -1.82
PSEN1-216ENST00000556066 IGLV8-61A0A075B6I0 122 aa3.66□□□□□ -1.82
PSEN1-216ENST00000556066 PCOTHQ58A44 107 aa3.66□□□□□ -1.82
PSEN1-216ENST00000556066 FAM236AA0A1B0GUQ0 79 aa3.65□□□□□ -1.83
PSEN1-216ENST00000556066 FAM236BA0A1B0GV22 79 aa3.65□□□□□ -1.83
PSEN1-216ENST00000556066 PDE6GP18545 87 aa3.65□□□□□ -1.83
PSEN1-216ENST00000556066 TMEM258P61165 79 aa3.65□□□□□ -1.83
PSEN1-216ENST00000556066 IGLV5-48A0A075B6I7 105 aa3.64□□□□□ -1.83
PSEN1-216ENST00000556066 A0A087WVE0 104 aa3.64□□□□□ -1.83
PSEN1-216ENST00000556066 A0A0G2JQZ4 141 aa3.64□□□□□ -1.83
PSEN1-216ENST00000556066 CCDC179H3BU77 68 aa3.64□□□□□ -1.83
PSEN1-216ENST00000556066 SMIM29Q86T20 159 aa3.64□□□□□ -1.83
PSEN1-216ENST00000556066 UBL5Q9BZL1 73 aa3.64□□□□□ -1.83
PSEN1-216ENST00000556066 KRTAP16-1A8MUX0 517 aa3.63□□□□□ -1.83
PSEN1-216ENST00000556066 BRK1Q8WUW1 75 aa3.63□□□□□ -1.83
PSEN1-216ENST00000556066 A0A1W2PNM2 257 aa3.62□□□□□ -1.83
PSEN1-216ENST00000556066 HIST1H4AP62805 103 aaKnown RBP3.62□□□□□ -1.83
PSEN1-216ENST00000556066 CAMK2N1Q7Z7J9 78 aa3.62□□□□□ -1.83
PSEN1-216ENST00000556066 F8WEM9 126 aa3.61□□□□□ -1.83
PSEN1-216ENST00000556066 CXCL6P80162 114 aa3.61□□□□□ -1.83
PSEN1-216ENST00000556066 ATP5EP2Q5VTU8 51 aa3.61□□□□□ -1.83
PSEN1-216ENST00000556066 UQCRQO14949 82 aa3.59□□□□□ -1.83
PSEN1-216ENST00000556066 NREPQ16612 68 aa3.59□□□□□ -1.83
PSEN1-216ENST00000556066 KRTAP19-2Q3LHN2 52 aa3.59□□□□□ -1.83
PSEN1-216ENST00000556066 IGFL1Q6UW32 110 aa3.59□□□□□ -1.83
PSEN1-216ENST00000556066 ATOX1O00244 68 aa3.58□□□□□ -1.84
PSEN1-216ENST00000556066 RPL37P61927 97 aaKnown RBP3.58□□□□□ -1.84
PSEN1-216ENST00000556066 MT1HP80294 61 aa3.58□□□□□ -1.84
PSEN1-216ENST00000556066 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
PSEN1-216ENST00000556066 M0R2T5 61 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms