RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ZFHX4Q86UP3 3567 aa-2.1□□□□□ -2.75
SNX6-204ENST00000555541 LTN1O94822 1766 aa-2.1□□□□□ -2.75
SNX6-204ENST00000555541 CDC42BPGQ6DT37 1551 aa-2.1□□□□□ -2.75
SNX6-204ENST00000555541 CEBPZOSA8MTT3 80 aa-2.11□□□□□ -2.75
SNX6-204ENST00000555541 UMAD1C9J7I0 102 aa-2.11□□□□□ -2.75
SNX6-204ENST00000555541 ACBD7Q8N6N7 88 aa-2.11□□□□□ -2.75
SNX6-204ENST00000555541 S100PP25815 95 aa-2.13□□□□□ -2.75
SNX6-204ENST00000555541 ATMQ13315 3056 aa-2.13□□□□□ -2.75
SNX6-204ENST00000555541 PARP4Q9UKK3 1724 aaKnown RBP-2.14□□□□□ -2.75
SNX6-204ENST00000555541 MGAQ8IWI9 3026 aa-2.14□□□□□ -2.75
SNX6-204ENST00000555541 GYPAP02724 150 aa-2.14□□□□□ -2.75
SNX6-204ENST00000555541 C20orf78Q9BR46 151 aa-2.14□□□□□ -2.75
SNX6-204ENST00000555541 DIP2BQ9P265 1576 aa-2.15□□□□□ -2.75
SNX6-204ENST00000555541 DEFB131BA0A096LNP1 70 aa-2.15□□□□□ -2.75
SNX6-204ENST00000555541 MRPL33O75394 65 aaKnown RBP-2.15□□□□□ -2.75
SNX6-204ENST00000555541 BVES-AS1Q5T3Y7 98 aa-2.15□□□□□ -2.75
SNX6-204ENST00000555541 NOP10Q9NPE3 64 aaKnown RBP-2.15□□□□□ -2.75
SNX6-204ENST00000555541 URB2Q14146 1524 aaKnown RBP-2.16□□□□□ -2.75
SNX6-204ENST00000555541 RABAC1Q9UI14 185 aa-2.16□□□□□ -2.76
SNX6-204ENST00000555541 CSMD2Q7Z408 3487 aa-2.16□□□□□ -2.76
SNX6-204ENST00000555541 KIAA0586Q9BVV6 1533 aa-2.17□□□□□ -2.76
SNX6-204ENST00000555541 DDX60LQ5H9U9 1706 aaKnown RBP-2.17□□□□□ -2.76
SNX6-204ENST00000555541 RPS27P42677 84 aaKnown RBP-2.17□□□□□ -2.76
SNX6-204ENST00000555541 RBP2P50120 134 aa-2.17□□□□□ -2.76
SNX6-204ENST00000555541 RPS27LQ71UM5 84 aaKnown RBP-2.17□□□□□ -2.76
SNX6-204ENST00000555541 MYO3AQ8NEV4 1616 aa-2.17□□□□□ -2.76
SNX6-204ENST00000555541 H3BUA1 57 aa-2.18□□□□□ -2.76
SNX6-204ENST00000555541 MINOS1Q5TGZ0 78 aa-2.18□□□□□ -2.76
SNX6-204ENST00000555541 C14orf144Q96I85 54 aa-2.19□□□□□ -2.76
SNX6-204ENST00000555541 CNTLNQ9NXG0 1405 aa-2.19□□□□□ -2.76
SNX6-204ENST00000555541 THOC2Q8NI27 1593 aaKnown RBP-2.19□□□□□ -2.76
SNX6-204ENST00000555541 CCDC88BA6NC98 1476 aa-2.2□□□□□ -2.76
SNX6-204ENST00000555541 LINC01546A6NGU7 62 aa-2.2□□□□□ -2.76
SNX6-204ENST00000555541 SNRPFP62306 86 aaKnown RBP-2.2□□□□□ -2.76
SNX6-204ENST00000555541 NREPQ16612 68 aa-2.2□□□□□ -2.76
SNX6-204ENST00000555541 NCMAPQ5T1S8 102 aa-2.2□□□□□ -2.76
SNX6-204ENST00000555541 LINC00643Q86TS7 51 aa-2.2□□□□□ -2.76
SNX6-204ENST00000555541 TCEAL7Q9BRU2 100 aa-2.2□□□□□ -2.76
SNX6-204ENST00000555541 LY75O60449 1722 aa-2.2□□□□□ -2.76
SNX6-204ENST00000555541 ITSN2Q9NZM3 1697 aa-2.21□□□□□ -2.76
SNX6-204ENST00000555541 CRIP1P50238 77 aa-2.21□□□□□ -2.76
SNX6-204ENST00000555541 PRUNE2Q8WUY3 3088 aa-2.21□□□□□ -2.76
SNX6-204ENST00000555541 ITSN1Q15811 1721 aa-2.22□□□□□ -2.76
SNX6-204ENST00000555541 MAST1Q9Y2H9 1570 aa-2.22□□□□□ -2.76
SNX6-204ENST00000555541 CEP162Q5TB80 1403 aa-2.22□□□□□ -2.76
SNX6-204ENST00000555541 ARFGEF2Q9Y6D5 1785 aa-2.22□□□□□ -2.76
SNX6-204ENST00000555541 ATP6V1G2-DDX39BF2Z307 99 aa-2.22□□□□□ -2.76
SNX6-204ENST00000555541 KIF1AQ12756 1690 aa-2.23□□□□□ -2.77
SNX6-204ENST00000555541 UBR1Q8IWV7 1749 aa-2.24□□□□□ -2.77
SNX6-204ENST00000555541 FCER1GP30273 86 aa-2.24□□□□□ -2.77
SNX6-204ENST00000555541 UBL5Q9BZL1 73 aa-2.24□□□□□ -2.77
SNX6-204ENST00000555541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.24□□□□□ -2.77
SNX6-204ENST00000555541 PLCH1Q4KWH8 1693 aa-2.25□□□□□ -2.77
SNX6-204ENST00000555541 ZC3H13Q5T200 1668 aaKnown RBP-2.25□□□□□ -2.77
SNX6-204ENST00000555541 M0R143 59 aa-2.25□□□□□ -2.77
SNX6-204ENST00000555541 DEFB4AO15263 64 aa-2.25□□□□□ -2.77
SNX6-204ENST00000555541 SFTA3P0C7M3 94 aa-2.25□□□□□ -2.77
SNX6-204ENST00000555541 TMEM131LA2VDJ0 1609 aa-2.26□□□□□ -2.77
SNX6-204ENST00000555541 PVALEFA0A1B0GWK0 134 aa-2.26□□□□□ -2.77
SNX6-204ENST00000555541 HFM1A2PYH4 1435 aa-2.26□□□□□ -2.77
SNX6-204ENST00000555541 A0A087WXM4 84 aa-2.27□□□□□ -2.77
SNX6-204ENST00000555541 M0QY20 66 aa-2.27□□□□□ -2.77
SNX6-204ENST00000555541 HMGA1P17096 107 aaKnown RBP-2.27□□□□□ -2.77
SNX6-204ENST00000555541 NCBP2-AS2Q69YL0 99 aa-2.27□□□□□ -2.77
SNX6-204ENST00000555541 KCNQ1DNQ9H478 68 aa-2.27□□□□□ -2.77
SNX6-204ENST00000555541 C6orf48Q9UBA6 75 aa-2.27□□□□□ -2.77
SNX6-204ENST00000555541 M0QZ58 72 aa-2.28□□□□□ -2.77
SNX6-204ENST00000555541 SPART-AS1P0CW21 52 aa-2.28□□□□□ -2.77
SNX6-204ENST00000555541 S100A16Q96FQ6 103 aaKnown RBP-2.28□□□□□ -2.77
SNX6-204ENST00000555541 FREM2Q5SZK8 3169 aa-2.28□□□□□ -2.77
SNX6-204ENST00000555541 ARHGAP35Q9NRY4 1499 aa-2.28□□□□□ -2.77
SNX6-204ENST00000555541 PIK3C2BO00750 1634 aa-2.28□□□□□ -2.77
SNX6-204ENST00000555541 PYY3Q5JQD4 70 aa-2.29□□□□□ -2.78
SNX6-204ENST00000555541 ATP5EP2Q5VTU8 51 aa-2.29□□□□□ -2.78
SNX6-204ENST00000555541 RICTORQ6R327 1708 aa-2.32□□□□□ -2.78
SNX6-204ENST00000555541 LRRIQ1Q96JM4 1722 aa-2.32□□□□□ -2.78
SNX6-204ENST00000555541 RALGAPBQ86X10 1494 aa-2.33□□□□□ -2.78
SNX6-204ENST00000555541 NRAPQ86VF7 1730 aa-2.33□□□□□ -2.78
SNX6-204ENST00000555541 MT1FP04733 61 aa-2.33□□□□□ -2.78
SNX6-204ENST00000555541 SMIM13P0DJ93 91 aa-2.33□□□□□ -2.78
SNX6-204ENST00000555541 SNHG12Q9BXW3 62 aa-2.33□□□□□ -2.78
SNX6-204ENST00000555541 ETDCA0A1B0GVM5 59 aa-2.34□□□□□ -2.78
SNX6-204ENST00000555541 KANTRA0A1W2PQU2 76 aa-2.34□□□□□ -2.78
SNX6-204ENST00000555541 TJP1Q07157 1748 aa-2.34□□□□□ -2.78
SNX6-204ENST00000555541 CENPEQ02224 2701 aa-2.35□□□□□ -2.79
SNX6-204ENST00000555541 DMDP11532 3685 aa-2.35□□□□□ -2.79
SNX6-204ENST00000555541 SMARCA2P51531 1590 aa-2.36□□□□□ -2.79
SNX6-204ENST00000555541 ERVK-7P63135 1459 aa-2.36□□□□□ -2.79
SNX6-204ENST00000555541 INO80Q9ULG1 1556 aaPredicted RBP-2.36□□□□□ -2.79
SNX6-204ENST00000555541 A8MTW9 85 aa-2.37□□□□□ -2.79
SNX6-204ENST00000555541 SPEGQ15772 3267 aa-2.37□□□□□ -2.79
SNX6-204ENST00000555541 CFAP43Q8NDM7 1665 aa-2.37□□□□□ -2.79
SNX6-204ENST00000555541 RNF17Q9BXT8 1623 aaKnown RBP-2.38□□□□□ -2.79
SNX6-204ENST00000555541 PKIAP61925 76 aa-2.38□□□□□ -2.79
SNX6-204ENST00000555541 ENHOQ6UWT2 76 aa-2.38□□□□□ -2.79
SNX6-204ENST00000555541 Q9H521 79 aa-2.38□□□□□ -2.79
SNX6-204ENST00000555541 CD163L1Q9NR16 1453 aa-2.39□□□□□ -2.79
SNX6-204ENST00000555541 ANKRD26Q9UPS8 1709 aa-2.39□□□□□ -2.79
SNX6-204ENST00000555541 A0A1B0GUL6 1792 aa-2.4□□□□□ -2.79
SNX6-204ENST00000555541 KDM5DQ9BY66 1539 aa-2.4□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms