RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 M0R378 163 aa1.62□□□□□ -2.15
CKS1BP1-201ENST00000555221 TIMM17BO60830 172 aa1.62□□□□□ -2.15
CKS1BP1-201ENST00000555221 SPINK8P0C7L1 97 aa1.62□□□□□ -2.15
CKS1BP1-201ENST00000555221 IFITM1P13164 125 aa1.62□□□□□ -2.15
CKS1BP1-201ENST00000555221 KRTDAPP60985 99 aa1.62□□□□□ -2.15
CKS1BP1-201ENST00000555221 C9orf116Q5BN46 136 aaPredicted RBP1.62□□□□□ -2.15
CKS1BP1-201ENST00000555221 Q5VSD8 79 aa1.62□□□□□ -2.15
CKS1BP1-201ENST00000555221 ERG28Q9UKR5 140 aa1.62□□□□□ -2.15
CKS1BP1-201ENST00000555221 DNAH6Q9C0G6 4158 aa1.62□□□□□ -2.15
CKS1BP1-201ENST00000555221 LRP2P98164 4655 aa1.61□□□□□ -2.15
CKS1BP1-201ENST00000555221 APOBP04114 4563 aaKnown RBP1.61□□□□□ -2.15
CKS1BP1-201ENST00000555221 A0A096LNI7 61 aa1.61□□□□□ -2.15
CKS1BP1-201ENST00000555221 LOC107984156A0A0G2JMH3 177 aa1.61□□□□□ -2.15
CKS1BP1-201ENST00000555221 NDUFC2O95298 119 aa1.61□□□□□ -2.15
CKS1BP1-201ENST00000555221 SMR3BP02814 79 aaPredicted RBP1.61□□□□□ -2.15
CKS1BP1-201ENST00000555221 WFDC2Q14508 124 aa1.61□□□□□ -2.15
CKS1BP1-201ENST00000555221 C1orf137Q5JT78 98 aa1.61□□□□□ -2.15
CKS1BP1-201ENST00000555221 S100A7L2Q5SY68 101 aa1.61□□□□□ -2.15
CKS1BP1-201ENST00000555221 C2orf82Q6UX34 121 aa1.61□□□□□ -2.15
CKS1BP1-201ENST00000555221 ARL17AQ8IVW1 177 aa1.61□□□□□ -2.15
CKS1BP1-201ENST00000555221 PMCHL2Q9BQD1 86 aa1.61□□□□□ -2.15
CKS1BP1-201ENST00000555221 TMEM126AQ9H061 195 aa1.61□□□□□ -2.15
CKS1BP1-201ENST00000555221 C6orf48Q9UBA6 75 aa1.61□□□□□ -2.15
CKS1BP1-201ENST00000555221 C22orf24Q9Y442 160 aa1.61□□□□□ -2.15
CKS1BP1-201ENST00000555221 TRAV13-2A0A0B4J235 113 aa1.6□□□□□ -2.15
CKS1BP1-201ENST00000555221 TRBV7-6A0A0J9YX20 115 aa1.6□□□□□ -2.15
CKS1BP1-201ENST00000555221 ETDCA0A1B0GVM5 59 aa1.6□□□□□ -2.15
CKS1BP1-201ENST00000555221 ZNF815PA8K554 130 aa1.6□□□□□ -2.15
CKS1BP1-201ENST00000555221 BCE1O60756 84 aa1.6□□□□□ -2.15
CKS1BP1-201ENST00000555221 C3orf79P0CE67 100 aa1.6□□□□□ -2.15
CKS1BP1-201ENST00000555221 SPAG11AQ6PDA7 123 aa1.6□□□□□ -2.15
CKS1BP1-201ENST00000555221 SPANXCQ9NY87 97 aa1.6□□□□□ -2.15
CKS1BP1-201ENST00000555221 DLEU1O43261 78 aa1.59□□□□□ -2.15
CKS1BP1-201ENST00000555221 SMIM13P0DJ93 91 aa1.59□□□□□ -2.15
CKS1BP1-201ENST00000555221 OR13C6PQ8NH95 151 aa1.59□□□□□ -2.15
CKS1BP1-201ENST00000555221 SPANXDQ9BXN6 97 aa1.59□□□□□ -2.15
CKS1BP1-201ENST00000555221 KCNQ1DNQ9H478 68 aa1.59□□□□□ -2.15
CKS1BP1-201ENST00000555221 DNAH17Q9UFH2 4485 aa1.59□□□□□ -2.16
CKS1BP1-201ENST00000555221 COX6CP09669 75 aa1.58□□□□□ -2.16
CKS1BP1-201ENST00000555221 OCIAD2Q56VL3 154 aa1.58□□□□□ -2.16
CKS1BP1-201ENST00000555221 BVES-AS1Q5T3Y7 98 aa1.58□□□□□ -2.16
CKS1BP1-201ENST00000555221 PHF5AQ7RTV0 110 aaKnown RBP1.58□□□□□ -2.16
CKS1BP1-201ENST00000555221 LINC01600Q96MT4 127 aa1.58□□□□□ -2.16
CKS1BP1-201ENST00000555221 C12orf57Q99622 126 aa1.58□□□□□ -2.16
CKS1BP1-201ENST00000555221 VAMP8Q9BV40 100 aa1.58□□□□□ -2.16
CKS1BP1-201ENST00000555221 HIGD1BQ9P298 99 aa1.58□□□□□ -2.16
CKS1BP1-201ENST00000555221 DNAH2Q9P225 4427 aa1.57□□□□□ -2.16
CKS1BP1-201ENST00000555221 H0YGX0 51 aa1.57□□□□□ -2.16
CKS1BP1-201ENST00000555221 COX8AP10176 69 aa1.57□□□□□ -2.16
CKS1BP1-201ENST00000555221 KRTAP10-4P60372 401 aaPredicted RBP1.57□□□□□ -2.16
CKS1BP1-201ENST00000555221 SSBP3-AS1Q7Z2R9 100 aa1.57□□□□□ -2.16
CKS1BP1-201ENST00000555221 LINC00308Q8TCZ7 52 aa1.57□□□□□ -2.16
CKS1BP1-201ENST00000555221 PPDPFLQ8WWR9 84 aa1.57□□□□□ -2.16
CKS1BP1-201ENST00000555221 IMUPQ9GZP8 106 aa1.57□□□□□ -2.16
CKS1BP1-201ENST00000555221 LAMTOR3Q9UHA4 124 aa1.57□□□□□ -2.16
CKS1BP1-201ENST00000555221 PKD1P98161 4303 aa1.57□□□□□ -2.16
CKS1BP1-201ENST00000555221 TRAV23DV6A0A075B6W5 121 aa1.56□□□□□ -2.16
CKS1BP1-201ENST00000555221 TRBV10-3A0A0K0K1G6 114 aa1.56□□□□□ -2.16
CKS1BP1-201ENST00000555221 A0A1B0GX51 115 aa1.56□□□□□ -2.16
CKS1BP1-201ENST00000555221 F8WEM9 126 aa1.56□□□□□ -2.16
CKS1BP1-201ENST00000555221 SPINK1P00995 79 aa1.56□□□□□ -2.16
CKS1BP1-201ENST00000555221 Q6ZRX8 168 aa1.56□□□□□ -2.16
CKS1BP1-201ENST00000555221 RAB37Q96AX2 223 aa1.56□□□□□ -2.16
CKS1BP1-201ENST00000555221 UQCR10Q9UDW1 63 aa1.56□□□□□ -2.16
CKS1BP1-201ENST00000555221 MACF1Q9UPN3 7388 aaKnown RBP1.56□□□□□ -2.16
CKS1BP1-201ENST00000555221 DNAH5Q8TE73 4624 aa1.56□□□□□ -2.16
CKS1BP1-201ENST00000555221 PKHD1L1Q86WI1 4243 aa1.55□□□□□ -2.16
CKS1BP1-201ENST00000555221 TEX49A0A1B0GTD5 131 aa1.55□□□□□ -2.16
CKS1BP1-201ENST00000555221 TSTD3H0UI37 97 aa1.55□□□□□ -2.16
CKS1BP1-201ENST00000555221 M0R143 59 aa1.55□□□□□ -2.16
CKS1BP1-201ENST00000555221 COX7BP24311 80 aa1.55□□□□□ -2.16
CKS1BP1-201ENST00000555221 SPRR1AP35321 89 aa1.55□□□□□ -2.16
CKS1BP1-201ENST00000555221 SPATA45Q537H7 98 aa1.55□□□□□ -2.16
CKS1BP1-201ENST00000555221 MUSTN1Q8IVN3 82 aa1.55□□□□□ -2.16
CKS1BP1-201ENST00000555221 ATOH7Q8N100 152 aa1.55□□□□□ -2.16
CKS1BP1-201ENST00000555221 SNHG12Q9BXW3 62 aa1.55□□□□□ -2.16
CKS1BP1-201ENST00000555221 C14orf132Q9NPU4 83 aa1.55□□□□□ -2.16
CKS1BP1-201ENST00000555221 PRO1854Q9UHT4 67 aa1.55□□□□□ -2.16
CKS1BP1-201ENST00000555221 FAT3Q8TDW7 4589 aa1.54□□□□□ -2.16
CKS1BP1-201ENST00000555221 LRP1BQ9NZR2 4599 aa1.54□□□□□ -2.16
CKS1BP1-201ENST00000555221 LOC110117498A0A087WWA1 95 aa1.54□□□□□ -2.16
CKS1BP1-201ENST00000555221 hADV29S1A0JD25 119 aa1.54□□□□□ -2.16
CKS1BP1-201ENST00000555221 TMEM256-PLSCR3K7ERE1 68 aa1.54□□□□□ -2.16
CKS1BP1-201ENST00000555221 NCR3O14931 201 aa1.54□□□□□ -2.16
CKS1BP1-201ENST00000555221 DNAL4O96015 105 aa1.54□□□□□ -2.16
CKS1BP1-201ENST00000555221 ELOF1P60002 83 aaKnown RBP1.54□□□□□ -2.16
CKS1BP1-201ENST00000555221 RPS29P62273 56 aaKnown RBP1.54□□□□□ -2.16
CKS1BP1-201ENST00000555221 HAMPP81172 84 aa1.54□□□□□ -2.16
CKS1BP1-201ENST00000555221 Q6JHZ5 121 aa1.54□□□□□ -2.16
CKS1BP1-201ENST00000555221 C14orf144Q96I85 54 aa1.54□□□□□ -2.16
CKS1BP1-201ENST00000555221 LIMD2Q9BT23 127 aa1.54□□□□□ -2.16
CKS1BP1-201ENST00000555221 PRO1933Q9H354 126 aa1.54□□□□□ -2.16
CKS1BP1-201ENST00000555221 VPS13BQ7Z7G8 4022 aa1.54□□□□□ -2.16
CKS1BP1-201ENST00000555221 SMIM6P0DI80 62 aa1.53□□□□□ -2.16
CKS1BP1-201ENST00000555221 PDE6GP18545 87 aa1.53□□□□□ -2.16
CKS1BP1-201ENST00000555221 NPC2P61916 151 aa1.53□□□□□ -2.16
CKS1BP1-201ENST00000555221 HSD52Q0P140 79 aa1.53□□□□□ -2.16
CKS1BP1-201ENST00000555221 SPRR4Q96PI1 79 aa1.53□□□□□ -2.16
CKS1BP1-201ENST00000555221 TRBV20-1A0A075B6N2 111 aa1.52□□□□□ -2.17
CKS1BP1-201ENST00000555221 SPRR1BP22528 89 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 165.2 ms