RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 IGLV5-48A0A075B6I7 105 aa10.18□□□□□ -0.78
PCNX1-209ENST00000554879 ZCCHC13Q8WW36 166 aaKnown RBP10.16□□□□□ -0.78
PCNX1-209ENST00000554879 IGLV7-43P04211 117 aa10.16□□□□□ -0.78
PCNX1-209ENST00000554879 CSAG1Q6PB30 78 aa10.16□□□□□ -0.78
PCNX1-209ENST00000554879 SPRR4Q96PI1 79 aa10.15□□□□□ -0.78
PCNX1-209ENST00000554879 PLAC8Q9NZF1 115 aa10.15□□□□□ -0.79
PCNX1-209ENST00000554879 SPINK1P00995 79 aa10.14□□□□□ -0.79
PCNX1-209ENST00000554879 A0A1B0GW54 56 aa10.13□□□□□ -0.79
PCNX1-209ENST00000554879 KRTAP10-1P60331 282 aa10.13□□□□□ -0.79
PCNX1-209ENST00000554879 ANK2Q01484 3957 aa10.12□□□□□ -0.79
PCNX1-209ENST00000554879 LINC01558Q9Y6Z2 57 aa10.09□□□□□ -0.79
PCNX1-209ENST00000554879 MIR22HGQ0VDD5 57 aa10.08□□□□□ -0.8
PCNX1-209ENST00000554879 PLA2G1BP04054 148 aaKnown RBP10.06□□□□□ -0.8
PCNX1-209ENST00000554879 CSMD3Q7Z407 3707 aa10.06□□□□□ -0.8
PCNX1-209ENST00000554879 LCE6AA0A183 80 aa10.05□□□□□ -0.8
PCNX1-209ENST00000554879 A8MWP4 228 aa10.05□□□□□ -0.8
PCNX1-209ENST00000554879 IGLV7-46A0A075B6I9 117 aa10.04□□□□□ -0.8
PCNX1-209ENST00000554879 DNHD1Q96M86 4753 aa10.03□□□□□ -0.8
PCNX1-209ENST00000554879 ACYP2P14621 99 aa10.03□□□□□ -0.8
PCNX1-209ENST00000554879 DNAH9Q9NYC9 4486 aa10.02□□□□□ -0.81
PCNX1-209ENST00000554879 DMBT1Q9UGM3 2413 aaPredicted RBP10.02□□□□□ -0.81
PCNX1-209ENST00000554879 UQCR11O14957 56 aa10.02□□□□□ -0.81
PCNX1-209ENST00000554879 TYMSOSQ8TAI1 123 aa10□□□□□ -0.81
PCNX1-209ENST00000554879 HRES1P13985 223 aa9.99□□□□□ -0.81
PCNX1-209ENST00000554879 SRRM2Q9UQ35 2752 aaKnown RBP9.98□□□□□ -0.81
PCNX1-209ENST00000554879 TP53AIP1Q9HCN2 124 aa9.98□□□□□ -0.81
PCNX1-209ENST00000554879 SPRR1BP22528 89 aa9.94□□□□□ -0.82
PCNX1-209ENST00000554879 CMYA5Q8N3K9 4069 aa9.94□□□□□ -0.82
PCNX1-209ENST00000554879 FAM229AH3BQW9 127 aa9.93□□□□□ -0.82
PCNX1-209ENST00000554879 SSBP3-AS1Q7Z2R9 100 aa9.92□□□□□ -0.82
PCNX1-209ENST00000554879 SPINT4Q6UDR6 99 aa9.91□□□□□ -0.82
PCNX1-209ENST00000554879 CRIPTQ9P021 101 aa9.91□□□□□ -0.82
PCNX1-209ENST00000554879 PRKDCP78527 4128 aaKnown RBP9.88□□□□□ -0.83
PCNX1-209ENST00000554879 IGKV2D-30A0A075B6S6 120 aa9.86□□□□□ -0.83
PCNX1-209ENST00000554879 IGKV2-30P06310 120 aa9.86□□□□□ -0.83
PCNX1-209ENST00000554879 KRTAP13-1Q8IUC0 172 aa9.85□□□□□ -0.83
PCNX1-209ENST00000554879 PLECQ15149 4684 aaKnown RBP9.85□□□□□ -0.83
PCNX1-209ENST00000554879 C8orf17Q9NRJ1 99 aa9.84□□□□□ -0.83
PCNX1-209ENST00000554879 MRPL34Q9BQ48 92 aaKnown RBP9.82□□□□□ -0.84
PCNX1-209ENST00000554879 DNAH3Q8TD57 4116 aa9.81□□□□□ -0.84
PCNX1-209ENST00000554879 A0A087X002 238 aa9.8□□□□□ -0.84
PCNX1-209ENST00000554879 LINC00304Q8N9R0 145 aa9.79□□□□□ -0.84
PCNX1-209ENST00000554879 LINC00483Q53H64 154 aa9.79□□□□□ -0.84
PCNX1-209ENST00000554879 A0A1B0GVX0 72 aa9.78□□□□□ -0.84
PCNX1-209ENST00000554879 MMP24-AS1A0A0U1RRL7 71 aa9.77□□□□□ -0.84
PCNX1-209ENST00000554879 KRTAP29-1A8MX34 341 aaPredicted RBP9.77□□□□□ -0.84
PCNX1-209ENST00000554879 LINC00472Q9H8W2 130 aa9.76□□□□□ -0.85
PCNX1-209ENST00000554879 DNAH10Q8IVF4 4471 aa9.76□□□□□ -0.85
PCNX1-209ENST00000554879 STARD9Q9P2P6 4700 aa9.73□□□□□ -0.85
PCNX1-209ENST00000554879 Q6ZSA8 131 aa9.7□□□□□ -0.86
PCNX1-209ENST00000554879 Q96NJ1 140 aa9.69□□□□□ -0.86
PCNX1-209ENST00000554879 LYSTQ99698 3801 aa9.69□□□□□ -0.86
PCNX1-209ENST00000554879 C9orf92A6NGG3 77 aa9.66□□□□□ -0.86
PCNX1-209ENST00000554879 KRTAP13-2Q52LG2 175 aa9.63□□□□□ -0.87
PCNX1-209ENST00000554879 Q5VSD8 79 aa9.61□□□□□ -0.87
PCNX1-209ENST00000554879 ROMO1P60602 79 aa9.58□□□□□ -0.88
PCNX1-209ENST00000554879 SPATA8Q6RVD6 105 aa9.58□□□□□ -0.88
PCNX1-209ENST00000554879 NOTCH2NLQ7Z3S9 236 aa9.57□□□□□ -0.88
PCNX1-209ENST00000554879 DNAH1Q9P2D7 4330 aa9.55□□□□□ -0.88
PCNX1-209ENST00000554879 KMT2AQ03164 3969 aa9.52□□□□□ -0.89
PCNX1-209ENST00000554879 Q8N1X5 172 aa9.52□□□□□ -0.89
PCNX1-209ENST00000554879 VPS13DQ5THJ4 4388 aa9.52□□□□□ -0.89
PCNX1-209ENST00000554879 ASB16-AS1Q495Z4 193 aa9.51□□□□□ -0.89
PCNX1-209ENST00000554879 DNAH7Q8WXX0 4024 aa9.5□□□□□ -0.89
PCNX1-209ENST00000554879 A0A0A0MQY5 61 aa9.5□□□□□ -0.89
PCNX1-209ENST00000554879 KRTAP1-4P0C5Y4 121 aa9.48□□□□□ -0.89
PCNX1-209ENST00000554879 Q5W150 140 aa9.47□□□□□ -0.89
PCNX1-209ENST00000554879 KRTAP25-1Q3LHN0 102 aa9.46□□□□□ -0.9
PCNX1-209ENST00000554879 NDUFAF8A1L188 74 aa9.45□□□□□ -0.9
PCNX1-209ENST00000554879 A0A1B0GVY2 172 aa9.44□□□□□ -0.9
PCNX1-209ENST00000554879 DNAH11Q96DT5 4516 aa9.41□□□□□ -0.9
PCNX1-209ENST00000554879 J3QL48 77 aa9.4□□□□□ -0.9
PCNX1-209ENST00000554879 A0A0D9SG42 100 aa9.36□□□□□ -0.91
PCNX1-209ENST00000554879 DMAC1Q96GE9 116 aa9.36□□□□□ -0.91
PCNX1-209ENST00000554879 KRTAP16-1A8MUX0 517 aa9.36□□□□□ -0.91
PCNX1-209ENST00000554879 A0A1B0GU33 70 aa9.34□□□□□ -0.91
PCNX1-209ENST00000554879 A8MUU9 505 aa9.34□□□□□ -0.91
PCNX1-209ENST00000554879 DYNC2H1Q8NCM8 4307 aaKnown RBP9.26□□□□□ -0.93
PCNX1-209ENST00000554879 DNAH17Q9UFH2 4485 aa9.25□□□□□ -0.93
PCNX1-209ENST00000554879 DNAH2Q9P225 4427 aa9.24□□□□□ -0.93
PCNX1-209ENST00000554879 ALMS1Q8TCU4 4167 aa9.23□□□□□ -0.93
PCNX1-209ENST00000554879 DNAH5Q8TE73 4624 aa9.23□□□□□ -0.93
PCNX1-209ENST00000554879 HYDINQ4G0P3 5121 aa9.18□□□□□ -0.94
PCNX1-209ENST00000554879 RPS29P62273 56 aaKnown RBP9.15□□□□□ -0.94
PCNX1-209ENST00000554879 LRP1BQ9NZR2 4599 aa9.13□□□□□ -0.95
PCNX1-209ENST00000554879 DNAH6Q9C0G6 4158 aa9.12□□□□□ -0.95
PCNX1-209ENST00000554879 LUZP6Q538Z0 58 aa9.12□□□□□ -0.95
PCNX1-209ENST00000554879 HECTD4Q9Y4D8 3996 aa9.1□□□□□ -0.95
PCNX1-209ENST00000554879 C20orf166-AS1Q96NR2 134 aa9.09□□□□□ -0.95
PCNX1-209ENST00000554879 FAT1Q14517 4588 aa9.09□□□□□ -0.95
PCNX1-209ENST00000554879 DYNC1H1Q14204 4646 aaKnown RBP9.08□□□□□ -0.96
PCNX1-209ENST00000554879 P0C880 135 aa9.05□□□□□ -0.96
PCNX1-209ENST00000554879 SACSQ9NZJ4 4579 aa9.04□□□□□ -0.96
PCNX1-209ENST00000554879 H1FX-AS1Q4G0G2 97 aa9.02□□□□□ -0.97
PCNX1-209ENST00000554879 DNAH8Q96JB1 4490 aa9.02□□□□□ -0.97
PCNX1-209ENST00000554879 FRAS1Q86XX4 4008 aa9□□□□□ -0.97
PCNX1-209ENST00000554879 C10orf95Q9H7T3 257 aa9□□□□□ -0.97
PCNX1-209ENST00000554879 H0YAA0 97 aa8.99□□□□□ -0.97
PCNX1-209ENST00000554879 KRTAP10-4P60372 401 aaPredicted RBP8.99□□□□□ -0.97
PCNX1-209ENST00000554879 COX6B2Q6YFQ2 88 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms