RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 Q5VV11 94 aa7.08□□□□□ -1.28
XRCC3-208ENST00000554811 DNAH7Q8WXX0 4024 aa7.08□□□□□ -1.28
XRCC3-208ENST00000554811 PLECQ15149 4684 aaKnown RBP7.08□□□□□ -1.28
XRCC3-208ENST00000554811 IGKV2D-30A0A075B6S6 120 aa7.08□□□□□ -1.28
XRCC3-208ENST00000554811 H3BPC8 53 aa7.08□□□□□ -1.28
XRCC3-208ENST00000554811 IGKV2-30P06310 120 aa7.08□□□□□ -1.28
XRCC3-208ENST00000554811 LIMD2Q9BT23 127 aa7.08□□□□□ -1.28
XRCC3-208ENST00000554811 TP53AIP1Q9HCN2 124 aa7.08□□□□□ -1.28
XRCC3-208ENST00000554811 LCA10Q71F78 164 aa7.07□□□□□ -1.28
XRCC3-208ENST00000554811 DMBT1Q9UGM3 2413 aaPredicted RBP7.07□□□□□ -1.28
XRCC3-208ENST00000554811 Q96NJ1 140 aa7.06□□□□□ -1.28
XRCC3-208ENST00000554811 SPINK1P00995 79 aa7.06□□□□□ -1.28
XRCC3-208ENST00000554811 KRTAP13-1Q8IUC0 172 aa7.06□□□□□ -1.28
XRCC3-208ENST00000554811 IGLV7-43P04211 117 aa7.05□□□□□ -1.28
XRCC3-208ENST00000554811 C7orf65Q6ZTY9 151 aa7.05□□□□□ -1.28
XRCC3-208ENST00000554811 SPANXA2-OT1Q8N9U9 137 aa7.04□□□□□ -1.28
XRCC3-208ENST00000554811 SMR3BP02814 79 aaPredicted RBP7.04□□□□□ -1.28
XRCC3-208ENST00000554811 Q5W150 140 aa7.03□□□□□ -1.28
XRCC3-208ENST00000554811 IGLV7-46A0A075B6I9 117 aa7.03□□□□□ -1.28
XRCC3-208ENST00000554811 KRTAP10-2P60368 255 aa7.02□□□□□ -1.29
XRCC3-208ENST00000554811 HRES1P13985 223 aa7.01□□□□□ -1.29
XRCC3-208ENST00000554811 FLG2Q5D862 2391 aaPredicted RBP7.01□□□□□ -1.29
XRCC3-208ENST00000554811 LINC00313P59037 77 aa7□□□□□ -1.29
XRCC3-208ENST00000554811 LINC01554Q52M75 96 aa6.98□□□□□ -1.29
XRCC3-208ENST00000554811 PLAC8Q9NZF1 115 aa6.98□□□□□ -1.29
XRCC3-208ENST00000554811 LOC101927531A0A1B0GV80 90 aa6.98□□□□□ -1.29
XRCC3-208ENST00000554811 ATP11AUNQ6ZP68 121 aa6.97□□□□□ -1.29
XRCC3-208ENST00000554811 SPINK7P58062 85 aa6.97□□□□□ -1.29
XRCC3-208ENST00000554811 LINC00483Q53H64 154 aa6.96□□□□□ -1.3
XRCC3-208ENST00000554811 STARD9Q9P2P6 4700 aa6.95□□□□□ -1.3
XRCC3-208ENST00000554811 A0A0A0MQY5 61 aa6.95□□□□□ -1.3
XRCC3-208ENST00000554811 ADM2Q7Z4H4 148 aa6.95□□□□□ -1.3
XRCC3-208ENST00000554811 FRAS1Q86XX4 4008 aa6.94□□□□□ -1.3
XRCC3-208ENST00000554811 PLA2G1BP04054 148 aaKnown RBP6.93□□□□□ -1.3
XRCC3-208ENST00000554811 DNAH1Q9P2D7 4330 aa6.93□□□□□ -1.3
XRCC3-208ENST00000554811 DNAH3Q8TD57 4116 aa6.93□□□□□ -1.3
XRCC3-208ENST00000554811 KMT2AQ03164 3969 aa6.93□□□□□ -1.3
XRCC3-208ENST00000554811 ACYP2P14621 99 aa6.92□□□□□ -1.3
XRCC3-208ENST00000554811 Q6ZR54 194 aa6.92□□□□□ -1.3
XRCC3-208ENST00000554811 PRKDCP78527 4128 aaKnown RBP6.9□□□□□ -1.3
XRCC3-208ENST00000554811 KRTAP10-1P60331 282 aa6.9□□□□□ -1.3
XRCC3-208ENST00000554811 TYMSOSQ8TAI1 123 aa6.89□□□□□ -1.31
XRCC3-208ENST00000554811 A0A1B0GU69 56 aa6.89□□□□□ -1.31
XRCC3-208ENST00000554811 Q8N1X5 172 aa6.89□□□□□ -1.31
XRCC3-208ENST00000554811 Q75L30 129 aa6.88□□□□□ -1.31
XRCC3-208ENST00000554811 SSBP3-AS1Q7Z2R9 100 aa6.88□□□□□ -1.31
XRCC3-208ENST00000554811 C9orf92A6NGG3 77 aa6.87□□□□□ -1.31
XRCC3-208ENST00000554811 FAM229AH3BQW9 127 aa6.87□□□□□ -1.31
XRCC3-208ENST00000554811 DNHD1Q96M86 4753 aa6.85□□□□□ -1.31
XRCC3-208ENST00000554811 KRTAP13-2Q52LG2 175 aa6.85□□□□□ -1.31
XRCC3-208ENST00000554811 LINC01558Q9Y6Z2 57 aa6.85□□□□□ -1.31
XRCC3-208ENST00000554811 A6NN06 94 aa6.84□□□□□ -1.31
XRCC3-208ENST00000554811 CDC42SE1Q9NRR8 79 aa6.83□□□□□ -1.32
XRCC3-208ENST00000554811 DNAH11Q96DT5 4516 aa6.82□□□□□ -1.32
XRCC3-208ENST00000554811 DNAH8Q96JB1 4490 aa6.81□□□□□ -1.32
XRCC3-208ENST00000554811 ASB16-AS1Q495Z4 193 aa6.8□□□□□ -1.32
XRCC3-208ENST00000554811 DNAH17Q9UFH2 4485 aa6.76□□□□□ -1.33
XRCC3-208ENST00000554811 DNAH6Q9C0G6 4158 aa6.75□□□□□ -1.33
XRCC3-208ENST00000554811 CSAG1Q6PB30 78 aa6.75□□□□□ -1.33
XRCC3-208ENST00000554811 VPS13DQ5THJ4 4388 aa6.74□□□□□ -1.33
XRCC3-208ENST00000554811 DNAH2Q9P225 4427 aa6.74□□□□□ -1.33
XRCC3-208ENST00000554811 LINC00304Q8N9R0 145 aa6.72□□□□□ -1.33
XRCC3-208ENST00000554811 HECTD4Q9Y4D8 3996 aa6.72□□□□□ -1.33
XRCC3-208ENST00000554811 DMAC1Q96GE9 116 aa6.71□□□□□ -1.33
XRCC3-208ENST00000554811 MIR22HGQ0VDD5 57 aa6.71□□□□□ -1.34
XRCC3-208ENST00000554811 UQCR11O14957 56 aa6.68□□□□□ -1.34
XRCC3-208ENST00000554811 LRP1BQ9NZR2 4599 aa6.67□□□□□ -1.34
XRCC3-208ENST00000554811 KRTAP13-3Q3SY46 172 aa6.66□□□□□ -1.34
XRCC3-208ENST00000554811 KRTAP1-4P0C5Y4 121 aa6.65□□□□□ -1.34
XRCC3-208ENST00000554811 KRTAP16-1A8MUX0 517 aa6.59□□□□□ -1.35
XRCC3-208ENST00000554811 CRIPTQ9P021 101 aa6.58□□□□□ -1.36
XRCC3-208ENST00000554811 Q6ZSA8 131 aa6.57□□□□□ -1.36
XRCC3-208ENST00000554811 HYDINQ4G0P3 5121 aa6.56□□□□□ -1.36
XRCC3-208ENST00000554811 DNAH5Q8TE73 4624 aa6.56□□□□□ -1.36
XRCC3-208ENST00000554811 DYNC2H1Q8NCM8 4307 aaKnown RBP6.55□□□□□ -1.36
XRCC3-208ENST00000554811 FAT1Q14517 4588 aa6.53□□□□□ -1.36
XRCC3-208ENST00000554811 VPS13BQ7Z7G8 4022 aa6.53□□□□□ -1.36
XRCC3-208ENST00000554811 SPINT4Q6UDR6 99 aa6.5□□□□□ -1.37
XRCC3-208ENST00000554811 ALMS1Q8TCU4 4167 aa6.5□□□□□ -1.37
XRCC3-208ENST00000554811 SPATA8Q6RVD6 105 aa6.49□□□□□ -1.37
XRCC3-208ENST00000554811 PKHD1P08F94 4074 aa6.48□□□□□ -1.37
XRCC3-208ENST00000554811 A0A0D9SG42 100 aa6.47□□□□□ -1.37
XRCC3-208ENST00000554811 A0A1B0GU33 70 aa6.45□□□□□ -1.38
XRCC3-208ENST00000554811 ROMO1P60602 79 aa6.45□□□□□ -1.38
XRCC3-208ENST00000554811 K7ERS5 55 aa6.44□□□□□ -1.38
XRCC3-208ENST00000554811 FAT2Q9NYQ8 4349 aa6.42□□□□□ -1.38
XRCC3-208ENST00000554811 NDUFAF8A1L188 74 aa6.41□□□□□ -1.38
XRCC3-208ENST00000554811 MYCBP2O75592 4640 aa6.36□□□□□ -1.39
XRCC3-208ENST00000554811 H0YAA0 97 aa6.35□□□□□ -1.39
XRCC3-208ENST00000554811 DYNC1H1Q14204 4646 aaKnown RBP6.33□□□□□ -1.4
XRCC3-208ENST00000554811 Q5VSD8 79 aa6.32□□□□□ -1.4
XRCC3-208ENST00000554811 H1FX-AS1Q4G0G2 97 aa6.31□□□□□ -1.4
XRCC3-208ENST00000554811 KRTAP3-1Q9BYR8 98 aa6.31□□□□□ -1.4
XRCC3-208ENST00000554811 A8MUU9 505 aa6.31□□□□□ -1.4
XRCC3-208ENST00000554811 C20orf166-AS1Q96NR2 134 aa6.29□□□□□ -1.4
XRCC3-208ENST00000554811 PKD1P98161 4303 aa6.29□□□□□ -1.4
XRCC3-208ENST00000554811 COX6B2Q6YFQ2 88 aa6.28□□□□□ -1.4
XRCC3-208ENST00000554811 LUZP6Q538Z0 58 aa6.28□□□□□ -1.4
XRCC3-208ENST00000554811 LRP1Q07954 4544 aaKnown RBP6.26□□□□□ -1.41
XRCC3-208ENST00000554811 RPS29P62273 56 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms