RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 LOC101927531A0A1B0GV80 90 aa9.68□□□□□ -0.86
PPP4R3A-205ENST00000554684 LINC00472Q9H8W2 130 aa9.67□□□□□ -0.86
PPP4R3A-205ENST00000554684 MEGF8Q7Z7M0 2845 aa9.66□□□□□ -0.86
PPP4R3A-205ENST00000554684 A0A087X002 238 aa9.66□□□□□ -0.86
PPP4R3A-205ENST00000554684 ACYP2P14621 99 aa9.63□□□□□ -0.87
PPP4R3A-205ENST00000554684 MMP24-AS1A0A0U1RRL7 71 aa9.62□□□□□ -0.87
PPP4R3A-205ENST00000554684 FP248Q71RG6 208 aaPredicted RBP9.62□□□□□ -0.87
PPP4R3A-205ENST00000554684 CD164Q04900 197 aa9.6□□□□□ -0.87
PPP4R3A-205ENST00000554684 FAM229BQ4G0N7 80 aa9.59□□□□□ -0.87
PPP4R3A-205ENST00000554684 IGLV7-46A0A075B6I9 117 aa9.58□□□□□ -0.88
PPP4R3A-205ENST00000554684 COA5Q86WW8 74 aa9.58□□□□□ -0.88
PPP4R3A-205ENST00000554684 LINC00483Q53H64 154 aa9.54□□□□□ -0.88
PPP4R3A-205ENST00000554684 COX6B2Q6YFQ2 88 aa9.51□□□□□ -0.89
PPP4R3A-205ENST00000554684 CSMD3Q7Z407 3707 aa9.49□□□□□ -0.89
PPP4R3A-205ENST00000554684 A0A1B0GU69 56 aa9.49□□□□□ -0.89
PPP4R3A-205ENST00000554684 KRTAP13-1Q8IUC0 172 aa9.49□□□□□ -0.89
PPP4R3A-205ENST00000554684 DNHD1Q96M86 4753 aa9.46□□□□□ -0.9
PPP4R3A-205ENST00000554684 Q8N1X5 172 aa9.44□□□□□ -0.9
PPP4R3A-205ENST00000554684 Q8N9P0 234 aaPredicted RBP9.43□□□□□ -0.9
PPP4R3A-205ENST00000554684 SPANXA2-OT1Q8N9U9 137 aa9.42□□□□□ -0.9
PPP4R3A-205ENST00000554684 NOTCH2NLQ7Z3S9 236 aa9.42□□□□□ -0.9
PPP4R3A-205ENST00000554684 K7ERS5 55 aa9.39□□□□□ -0.91
PPP4R3A-205ENST00000554684 KRTAP29-1A8MX34 341 aaPredicted RBP9.38□□□□□ -0.91
PPP4R3A-205ENST00000554684 Q1T7F1 81 aa9.37□□□□□ -0.91
PPP4R3A-205ENST00000554684 KRTAP13-2Q52LG2 175 aa9.37□□□□□ -0.91
PPP4R3A-205ENST00000554684 HRES1P13985 223 aa9.36□□□□□ -0.91
PPP4R3A-205ENST00000554684 CYP4F30PQ9H0H9 118 aa9.36□□□□□ -0.91
PPP4R3A-205ENST00000554684 Q6ZSA8 131 aa9.33□□□□□ -0.92
PPP4R3A-205ENST00000554684 Q5W150 140 aa9.31□□□□□ -0.92
PPP4R3A-205ENST00000554684 ZCCHC13Q8WW36 166 aaKnown RBP9.26□□□□□ -0.93
PPP4R3A-205ENST00000554684 KTN1-AS1Q86SY8 53 aa9.22□□□□□ -0.93
PPP4R3A-205ENST00000554684 Q5VV11 94 aa9.2□□□□□ -0.94
PPP4R3A-205ENST00000554684 RBM12B-AS1Q9P1G2 102 aa9.18□□□□□ -0.94
PPP4R3A-205ENST00000554684 SPINK7P58062 85 aa9.17□□□□□ -0.94
PPP4R3A-205ENST00000554684 CDC42SE1Q9NRR8 79 aa9.16□□□□□ -0.94
PPP4R3A-205ENST00000554684 UQCR11O14957 56 aa9.16□□□□□ -0.94
PPP4R3A-205ENST00000554684 HUWE1Q7Z6Z7 4374 aaKnown RBP9.15□□□□□ -0.95
PPP4R3A-205ENST00000554684 ASB16-AS1Q495Z4 193 aa9.13□□□□□ -0.95
PPP4R3A-205ENST00000554684 M0R2T5 61 aa9.12□□□□□ -0.95
PPP4R3A-205ENST00000554684 KRTAP1-4P0C5Y4 121 aa9.12□□□□□ -0.95
PPP4R3A-205ENST00000554684 MIR22HGQ0VDD5 57 aa9.09□□□□□ -0.95
PPP4R3A-205ENST00000554684 Q75L30 129 aa9.09□□□□□ -0.95
PPP4R3A-205ENST00000554684 A0A1B0GVY2 172 aa9.07□□□□□ -0.96
PPP4R3A-205ENST00000554684 LINC01554Q52M75 96 aa9.07□□□□□ -0.96
PPP4R3A-205ENST00000554684 A8MU10 97 aa9.05□□□□□ -0.96
PPP4R3A-205ENST00000554684 LINC01558Q9Y6Z2 57 aa9.03□□□□□ -0.96
PPP4R3A-205ENST00000554684 SEC61BP60468 96 aaKnown RBP9.01□□□□□ -0.97
PPP4R3A-205ENST00000554684 LCA10Q71F78 164 aa9.01□□□□□ -0.97
PPP4R3A-205ENST00000554684 PRAC1Q96KF2 57 aa8.99□□□□□ -0.97
PPP4R3A-205ENST00000554684 DMAC1Q96GE9 116 aa8.99□□□□□ -0.97
PPP4R3A-205ENST00000554684 DNAH9Q9NYC9 4486 aa8.97□□□□□ -0.97
PPP4R3A-205ENST00000554684 RPS29P62273 56 aaKnown RBP8.96□□□□□ -0.98
PPP4R3A-205ENST00000554684 A0A0D9SG42 100 aa8.94□□□□□ -0.98
PPP4R3A-205ENST00000554684 PRKDCP78527 4128 aaKnown RBP8.91□□□□□ -0.98
PPP4R3A-205ENST00000554684 A0A1B0GU33 70 aa8.87□□□□□ -0.99
PPP4R3A-205ENST00000554684 PLECQ15149 4684 aaKnown RBP8.84□□□□□ -0.99
PPP4R3A-205ENST00000554684 S4R3F8 94 aa8.81□□□□□ -1
PPP4R3A-205ENST00000554684 CSAG1Q6PB30 78 aa8.78□□□□□ -1
PPP4R3A-205ENST00000554684 SPINT4Q6UDR6 99 aa8.78□□□□□ -1
PPP4R3A-205ENST00000554684 A8MUU9 505 aa8.74□□□□□ -1.01
PPP4R3A-205ENST00000554684 RPL37P61927 97 aaKnown RBP8.72□□□□□ -1.01
PPP4R3A-205ENST00000554684 CRIPTQ9P021 101 aa8.72□□□□□ -1.01
PPP4R3A-205ENST00000554684 C20orf166-AS1Q96NR2 134 aa8.72□□□□□ -1.01
PPP4R3A-205ENST00000554684 XP32Q5T750 250 aa8.7□□□□□ -1.02
PPP4R3A-205ENST00000554684 STARD9Q9P2P6 4700 aa8.7□□□□□ -1.02
PPP4R3A-205ENST00000554684 ANK2Q01484 3957 aa8.7□□□□□ -1.02
PPP4R3A-205ENST00000554684 KRTAP16-1A8MUX0 517 aa8.7□□□□□ -1.02
PPP4R3A-205ENST00000554684 A6NN06 94 aa8.69□□□□□ -1.02
PPP4R3A-205ENST00000554684 KRTAP10-8P60410 259 aa8.68□□□□□ -1.02
PPP4R3A-205ENST00000554684 KRTAP4-5Q9BYR2 181 aa8.67□□□□□ -1.02
PPP4R3A-205ENST00000554684 H3BS24 57 aa8.65□□□□□ -1.02
PPP4R3A-205ENST00000554684 ADM2Q7Z4H4 148 aa8.65□□□□□ -1.02
PPP4R3A-205ENST00000554684 DNAH10Q8IVF4 4471 aa8.64□□□□□ -1.03
PPP4R3A-205ENST00000554684 DNAH11Q96DT5 4516 aa8.64□□□□□ -1.03
PPP4R3A-205ENST00000554684 SPATA8Q6RVD6 105 aa8.61□□□□□ -1.03
PPP4R3A-205ENST00000554684 DNAH5Q8TE73 4624 aa8.61□□□□□ -1.03
PPP4R3A-205ENST00000554684 R4GN34 69 aa8.58□□□□□ -1.04
PPP4R3A-205ENST00000554684 H1FX-AS1Q4G0G2 97 aa8.56□□□□□ -1.04
PPP4R3A-205ENST00000554684 FAT1Q14517 4588 aa8.55□□□□□ -1.04
PPP4R3A-205ENST00000554684 KRTAP13-3Q3SY46 172 aa8.53□□□□□ -1.04
PPP4R3A-205ENST00000554684 DNAH1Q9P2D7 4330 aa8.52□□□□□ -1.04
PPP4R3A-205ENST00000554684 CAMK2N1Q7Z7J9 78 aa8.52□□□□□ -1.05
PPP4R3A-205ENST00000554684 KMT2AQ03164 3969 aa8.5□□□□□ -1.05
PPP4R3A-205ENST00000554684 LYSTQ99698 3801 aa8.49□□□□□ -1.05
PPP4R3A-205ENST00000554684 TPRXLQ17RH7 258 aa8.49□□□□□ -1.05
PPP4R3A-205ENST00000554684 KIAA1109Q2LD37 5005 aa8.47□□□□□ -1.05
PPP4R3A-205ENST00000554684 M0QZ58 72 aa8.47□□□□□ -1.05
PPP4R3A-205ENST00000554684 MT1HL1P0DM35 61 aa8.39□□□□□ -1.07
PPP4R3A-205ENST00000554684 KRTAP10-4P60372 401 aaPredicted RBP8.38□□□□□ -1.07
PPP4R3A-205ENST00000554684 RYR1P21817 5038 aa8.37□□□□□ -1.07
PPP4R3A-205ENST00000554684 VPS13DQ5THJ4 4388 aa8.37□□□□□ -1.07
PPP4R3A-205ENST00000554684 DYNC1H1Q14204 4646 aaKnown RBP8.35□□□□□ -1.07
PPP4R3A-205ENST00000554684 LRP1BQ9NZR2 4599 aa8.32□□□□□ -1.08
PPP4R3A-205ENST00000554684 RYR3Q15413 4870 aa8.29□□□□□ -1.08
PPP4R3A-205ENST00000554684 CMYA5Q8N3K9 4069 aa8.27□□□□□ -1.09
PPP4R3A-205ENST00000554684 HYDINQ4G0P3 5121 aa8.25□□□□□ -1.09
PPP4R3A-205ENST00000554684 DNAH3Q8TD57 4116 aa8.24□□□□□ -1.09
PPP4R3A-205ENST00000554684 ROMO1P60602 79 aa8.22□□□□□ -1.09
PPP4R3A-205ENST00000554684 DNAH17Q9UFH2 4485 aa8.19□□□□□ -1.1
PPP4R3A-205ENST00000554684 KMT2CQ8NEZ4 4911 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms