RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 IGLV8-61A0A075B6I0 122 aa3.65□□□□□ -1.83
SCFD1-212ENST00000554486 H3BT86 120 aa3.65□□□□□ -1.83
SCFD1-212ENST00000554486 OXTP01178 125 aa3.65□□□□□ -1.83
SCFD1-212ENST00000554486 TYMSOSQ8TAI1 123 aa3.65□□□□□ -1.83
SCFD1-212ENST00000554486 A0A0G2JQZ4 141 aa3.64□□□□□ -1.83
SCFD1-212ENST00000554486 A0A1B0GV72 72 aa3.64□□□□□ -1.83
SCFD1-212ENST00000554486 F8WEM9 126 aa3.64□□□□□ -1.83
SCFD1-212ENST00000554486 C9orf153Q5TBE3 101 aa3.64□□□□□ -1.83
SCFD1-212ENST00000554486 SSBP3-AS1Q7Z2R9 100 aa3.64□□□□□ -1.83
SCFD1-212ENST00000554486 ANKRD29Q8N6D5 301 aa3.64□□□□□ -1.83
SCFD1-212ENST00000554486 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
SCFD1-212ENST00000554486 OBSCN-AS1Q96MR7 158 aa3.63□□□□□ -1.83
SCFD1-212ENST00000554486 Q6JHZ5 121 aa3.62□□□□□ -1.83
SCFD1-212ENST00000554486 IGFL1Q6UW32 110 aa3.62□□□□□ -1.83
SCFD1-212ENST00000554486 TRBV7-4A0A0J9YYF1 115 aa3.61□□□□□ -1.83
SCFD1-212ENST00000554486 F8W1H4 67 aa3.61□□□□□ -1.83
SCFD1-212ENST00000554486 RBM3P98179 157 aaKnown RBP3.61□□□□□ -1.83
SCFD1-212ENST00000554486 KRTAP5-1Q6L8H4 278 aa3.61□□□□□ -1.83
SCFD1-212ENST00000554486 LINC00304Q8N9R0 145 aa3.61□□□□□ -1.83
SCFD1-212ENST00000554486 A0A1W2PNM2 257 aa3.6□□□□□ -1.83
SCFD1-212ENST00000554486 JMJD7-PLA2G4BH0Y9G9 81 aa3.6□□□□□ -1.83
SCFD1-212ENST00000554486 LOC110117498A0A087WWA1 95 aa3.59□□□□□ -1.83
SCFD1-212ENST00000554486 ETDBQ3ZM63 59 aa3.59□□□□□ -1.83
SCFD1-212ENST00000554486 HRCT1Q6UXD1 115 aa3.59□□□□□ -1.83
SCFD1-212ENST00000554486 Q6ZQT0 140 aa3.59□□□□□ -1.83
SCFD1-212ENST00000554486 DSCR8Q96T75 97 aa3.59□□□□□ -1.83
SCFD1-212ENST00000554486 C14orf132Q9NPU4 83 aa3.59□□□□□ -1.83
SCFD1-212ENST00000554486 CD164Q04900 197 aa3.58□□□□□ -1.84
SCFD1-212ENST00000554486 SPAG11AQ6PDA7 123 aa3.58□□□□□ -1.84
SCFD1-212ENST00000554486 Q6Q795 121 aa3.58□□□□□ -1.84
SCFD1-212ENST00000554486 TEN1Q86WV5 123 aa3.58□□□□□ -1.84
SCFD1-212ENST00000554486 TRBV7-7A0A0K0K1E9 115 aa3.57□□□□□ -1.84
SCFD1-212ENST00000554486 SPINK1P00995 79 aa3.57□□□□□ -1.84
SCFD1-212ENST00000554486 CCKP06307 115 aa3.57□□□□□ -1.84
SCFD1-212ENST00000554486 PDE6GP18545 87 aa3.56□□□□□ -1.84
SCFD1-212ENST00000554486 RPS29P62273 56 aaKnown RBP3.56□□□□□ -1.84
SCFD1-212ENST00000554486 Q5XG85 94 aa3.55□□□□□ -1.84
SCFD1-212ENST00000554486 VPS25Q9BRG1 176 aa3.55□□□□□ -1.84
SCFD1-212ENST00000554486 HERC1Q15751 4861 aa3.54□□□□□ -1.84
SCFD1-212ENST00000554486 A0A087WSZ3 146 aa3.54□□□□□ -1.84
SCFD1-212ENST00000554486 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
SCFD1-212ENST00000554486 ASB16-AS1Q495Z4 193 aa3.53□□□□□ -1.84
SCFD1-212ENST00000554486 LIMD2Q9BT23 127 aa3.53□□□□□ -1.84
SCFD1-212ENST00000554486 A0A1B0GW54 56 aa3.52□□□□□ -1.85
SCFD1-212ENST00000554486 C1orf195Q5TG92 126 aa3.52□□□□□ -1.85
SCFD1-212ENST00000554486 Q96NJ1 140 aa3.52□□□□□ -1.85
SCFD1-212ENST00000554486 RETNLBQ9BQ08 111 aa3.52□□□□□ -1.85
SCFD1-212ENST00000554486 SS18L2Q9UHA2 77 aa3.51□□□□□ -1.85
SCFD1-212ENST00000554486 LINC00472Q9H8W2 130 aa3.5□□□□□ -1.85
SCFD1-212ENST00000554486 LINC00846Q9NV44 126 aa3.5□□□□□ -1.85
SCFD1-212ENST00000554486 FAM240AA0A1B0GVK7 77 aa3.48□□□□□ -1.85
SCFD1-212ENST00000554486 PRR4Q16378 134 aa3.48□□□□□ -1.85
SCFD1-212ENST00000554486 NREPQ16612 68 aa3.48□□□□□ -1.85
SCFD1-212ENST00000554486 DEFB116Q30KQ4 102 aa3.48□□□□□ -1.85
SCFD1-212ENST00000554486 FP248Q71RG6 208 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-212ENST00000554486 HMCN2Q8NDA2 5059 aa3.47□□□□□ -1.85
SCFD1-212ENST00000554486 IGKV4-1P06312 121 aa3.47□□□□□ -1.85
SCFD1-212ENST00000554486 CXCL6P80162 114 aa3.47□□□□□ -1.85
SCFD1-212ENST00000554486 ACYP1P07311 99 aa3.46□□□□□ -1.86
SCFD1-212ENST00000554486 UBL5Q9BZL1 73 aa3.46□□□□□ -1.86
SCFD1-212ENST00000554486 J3KT08 172 aa3.45□□□□□ -1.86
SCFD1-212ENST00000554486 J3QR89 54 aa3.45□□□□□ -1.86
SCFD1-212ENST00000554486 SIGMAR1Q99720 223 aa3.45□□□□□ -1.86
SCFD1-212ENST00000554486 BPY2O14599 106 aa3.44□□□□□ -1.86
SCFD1-212ENST00000554486 KRTAP13-3Q3SY46 172 aa3.44□□□□□ -1.86
SCFD1-212ENST00000554486 IGKV3D-7A0A0C4DH55 119 aa3.43□□□□□ -1.86
SCFD1-212ENST00000554486 A0A1B0GVX0 72 aa3.43□□□□□ -1.86
SCFD1-212ENST00000554486 A8MWP4 228 aa3.43□□□□□ -1.86
SCFD1-212ENST00000554486 TPRXLQ17RH7 258 aa3.43□□□□□ -1.86
SCFD1-212ENST00000554486 LPAP08519 4548 aa3.43□□□□□ -1.86
SCFD1-212ENST00000554486 K7ERU9 68 aa3.42□□□□□ -1.86
SCFD1-212ENST00000554486 Q8N9L7 120 aa3.42□□□□□ -1.86
SCFD1-212ENST00000554486 LRP2P98164 4655 aa3.41□□□□□ -1.86
SCFD1-212ENST00000554486 IGHV6-1A0A0B4J1U7 121 aa3.41□□□□□ -1.86
SCFD1-212ENST00000554486 C9orf92A6NGG3 77 aa3.41□□□□□ -1.86
SCFD1-212ENST00000554486 K7EQZ3 153 aa3.41□□□□□ -1.86
SCFD1-212ENST00000554486 LINC00643Q86TS7 51 aa3.41□□□□□ -1.86
SCFD1-212ENST00000554486 PRR15Q8IV56 129 aa3.41□□□□□ -1.86
SCFD1-212ENST00000554486 NDUFB1O75438 58 aa3.4□□□□□ -1.87
SCFD1-212ENST00000554486 LINC00313P59037 77 aa3.4□□□□□ -1.87
SCFD1-212ENST00000554486 MMP24-AS1A0A0U1RRL7 71 aa3.39□□□□□ -1.87
SCFD1-212ENST00000554486 C8orf87E5RJ46 101 aa3.39□□□□□ -1.87
SCFD1-212ENST00000554486 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
SCFD1-212ENST00000554486 ATP5EP2Q5VTU8 51 aa3.39□□□□□ -1.87
SCFD1-212ENST00000554486 C8orf17Q9NRJ1 99 aa3.39□□□□□ -1.87
SCFD1-212ENST00000554486 A8MU10 97 aa3.36□□□□□ -1.87
SCFD1-212ENST00000554486 A8MUU9 505 aa3.36□□□□□ -1.87
SCFD1-212ENST00000554486 MT-ATP8P03928 68 aa3.36□□□□□ -1.87
SCFD1-212ENST00000554486 C20orf166-AS1Q96NR2 134 aa3.36□□□□□ -1.87
SCFD1-212ENST00000554486 MUC17Q685J3 4493 aa3.36□□□□□ -1.87
SCFD1-212ENST00000554486 RNF213Q63HN8 5207 aa3.35□□□□□ -1.87
SCFD1-212ENST00000554486 hDV103S1A0JD37 113 aa3.35□□□□□ -1.87
SCFD1-212ENST00000554486 HCG22E2RYF7 251 aa3.35□□□□□ -1.87
SCFD1-212ENST00000554486 WFDC13Q8IUB5 93 aa3.35□□□□□ -1.87
SCFD1-212ENST00000554486 TMEM254Q8TBM7 123 aa3.35□□□□□ -1.87
SCFD1-212ENST00000554486 A0A087WVE0 104 aa3.34□□□□□ -1.87
SCFD1-212ENST00000554486 RPL37P61927 97 aaKnown RBP3.34□□□□□ -1.87
SCFD1-212ENST00000554486 HIST1H4AP62805 103 aaKnown RBP3.34□□□□□ -1.87
SCFD1-212ENST00000554486 CASC2Q6XLA1 102 aa3.34□□□□□ -1.87
SCFD1-212ENST00000554486 MRPL34Q9BQ48 92 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms