RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 CCKP06307 115 aa9.2□□□□□ -0.94
FOXN3-204ENST00000553840 IGKV4-1P06312 121 aa9.2□□□□□ -0.94
FOXN3-204ENST00000553840 LORP23490 312 aaPredicted RBP9.2□□□□□ -0.94
FOXN3-204ENST00000553840 DSCR10P59022 87 aa9.2□□□□□ -0.94
FOXN3-204ENST00000553840 LINC00313P59037 77 aa9.19□□□□□ -0.94
FOXN3-204ENST00000553840 VPS25Q9BRG1 176 aa9.19□□□□□ -0.94
FOXN3-204ENST00000553840 SPCS1Q9Y6A9 102 aa9.18□□□□□ -0.94
FOXN3-204ENST00000553840 MTURNQ8N3F0 131 aa9.17□□□□□ -0.94
FOXN3-204ENST00000553840 JMJD7-PLA2G4BH0Y9G9 81 aa9.16□□□□□ -0.94
FOXN3-204ENST00000553840 K7EP34 96 aa9.15□□□□□ -0.94
FOXN3-204ENST00000553840 H3BT86 120 aa9.13□□□□□ -0.95
FOXN3-204ENST00000553840 LINC00472Q9H8W2 130 aa9.12□□□□□ -0.95
FOXN3-204ENST00000553840 CRCT1Q9UGL9 99 aa9.12□□□□□ -0.95
FOXN3-204ENST00000553840 DEFB116Q30KQ4 102 aa9.11□□□□□ -0.95
FOXN3-204ENST00000553840 C14orf132Q9NPU4 83 aa9.11□□□□□ -0.95
FOXN3-204ENST00000553840 LOC110117498A0A087WWA1 95 aa9.09□□□□□ -0.95
FOXN3-204ENST00000553840 C21orf62-AS1Q17RA5 79 aa9.09□□□□□ -0.95
FOXN3-204ENST00000553840 Q6ZQT0 140 aa9.09□□□□□ -0.95
FOXN3-204ENST00000553840 IGHV6-1A0A0B4J1U7 121 aa9.08□□□□□ -0.96
FOXN3-204ENST00000553840 PDE6GP18545 87 aa9.08□□□□□ -0.96
FOXN3-204ENST00000553840 KRTAP16-1A8MUX0 517 aa9.07□□□□□ -0.96
FOXN3-204ENST00000553840 FLGP20930 4061 aaPredicted RBP9.05□□□□□ -0.96
FOXN3-204ENST00000553840 C8orf87E5RJ46 101 aa9.04□□□□□ -0.96
FOXN3-204ENST00000553840 F8W1H4 67 aa9.04□□□□□ -0.96
FOXN3-204ENST00000553840 NOTCH2NLQ7Z3S9 236 aa9.04□□□□□ -0.96
FOXN3-204ENST00000553840 J3KT08 172 aa9.02□□□□□ -0.97
FOXN3-204ENST00000553840 FAM236DA0A1B0GTK5 79 aa9.01□□□□□ -0.97
FOXN3-204ENST00000553840 A0A1B0GVX0 72 aa9.01□□□□□ -0.97
FOXN3-204ENST00000553840 FAM236CP0DP71 79 aa9.01□□□□□ -0.97
FOXN3-204ENST00000553840 PRO0461Q9UI25 63 aa9□□□□□ -0.97
FOXN3-204ENST00000553840 A0A1B0GW54 56 aa8.99□□□□□ -0.97
FOXN3-204ENST00000553840 RBM12B-AS1Q9P1G2 102 aa8.99□□□□□ -0.97
FOXN3-204ENST00000553840 NDUFB1O75438 58 aa8.97□□□□□ -0.97
FOXN3-204ENST00000553840 NREPQ16612 68 aa8.93□□□□□ -0.98
FOXN3-204ENST00000553840 J3QR89 54 aa8.92□□□□□ -0.98
FOXN3-204ENST00000553840 FSIP2Q5CZC0 6907 aa8.92□□□□□ -0.98
FOXN3-204ENST00000553840 K7ERU9 68 aa8.9□□□□□ -0.98
FOXN3-204ENST00000553840 HRES1P13985 223 aa8.9□□□□□ -0.98
FOXN3-204ENST00000553840 ZCCHC13Q8WW36 166 aaKnown RBP8.89□□□□□ -0.99
FOXN3-204ENST00000553840 MPLKIPQ8TAP9 179 aa8.88□□□□□ -0.99
FOXN3-204ENST00000553840 A8MWP4 228 aa8.86□□□□□ -0.99
FOXN3-204ENST00000553840 ETDBQ3ZM63 59 aa8.86□□□□□ -0.99
FOXN3-204ENST00000553840 KRTAP9-8Q9BYQ0 159 aa8.85□□□□□ -0.99
FOXN3-204ENST00000553840 Q8N9P0 234 aaPredicted RBP8.84□□□□□ -0.99
FOXN3-204ENST00000553840 C8orf17Q9NRJ1 99 aa8.84□□□□□ -0.99
FOXN3-204ENST00000553840 SPINK7P58062 85 aa8.82□□□□□ -1
FOXN3-204ENST00000553840 IGKV3D-7A0A0C4DH55 119 aa8.81□□□□□ -1
FOXN3-204ENST00000553840 Q6ZVQ6 151 aa8.8□□□□□ -1
FOXN3-204ENST00000553840 BPY2O14599 106 aa8.79□□□□□ -1
FOXN3-204ENST00000553840 PRR15Q8IV56 129 aa8.77□□□□□ -1.01
FOXN3-204ENST00000553840 LINC00846Q9NV44 126 aa8.77□□□□□ -1.01
FOXN3-204ENST00000553840 UBL5Q9BZL1 73 aa8.76□□□□□ -1.01
FOXN3-204ENST00000553840 K7EQZ3 153 aa8.73□□□□□ -1.01
FOXN3-204ENST00000553840 MT2AP02795 61 aa8.73□□□□□ -1.01
FOXN3-204ENST00000553840 TMEM254Q8TBM7 123 aa8.72□□□□□ -1.01
FOXN3-204ENST00000553840 MRPL34Q9BQ48 92 aaKnown RBP8.71□□□□□ -1.02
FOXN3-204ENST00000553840 WFDC13Q8IUB5 93 aa8.7□□□□□ -1.02
FOXN3-204ENST00000553840 Q8N9L7 120 aa8.69□□□□□ -1.02
FOXN3-204ENST00000553840 MMP24-AS1A0A0U1RRL7 71 aa8.68□□□□□ -1.02
FOXN3-204ENST00000553840 KRTAP10-10P60014 251 aa8.68□□□□□ -1.02
FOXN3-204ENST00000553840 ACYP1P07311 99 aa8.67□□□□□ -1.02
FOXN3-204ENST00000553840 hDV103S1A0JD37 113 aa8.66□□□□□ -1.02
FOXN3-204ENST00000553840 NDUFS5O43920 106 aa8.66□□□□□ -1.02
FOXN3-204ENST00000553840 MT1FP04733 61 aa8.65□□□□□ -1.02
FOXN3-204ENST00000553840 FAM240AA0A1B0GVK7 77 aa8.63□□□□□ -1.03
FOXN3-204ENST00000553840 CASC2Q6XLA1 102 aa8.59□□□□□ -1.03
FOXN3-204ENST00000553840 KRTAP9-3Q9BYQ3 159 aa8.58□□□□□ -1.04
FOXN3-204ENST00000553840 CXCL6P80162 114 aa8.57□□□□□ -1.04
FOXN3-204ENST00000553840 HCG22E2RYF7 251 aa8.54□□□□□ -1.04
FOXN3-204ENST00000553840 IGKV2D-30A0A075B6S6 120 aa8.52□□□□□ -1.05
FOXN3-204ENST00000553840 IGKV2-30P06310 120 aa8.52□□□□□ -1.05
FOXN3-204ENST00000553840 H1FX-AS1Q4G0G2 97 aa8.52□□□□□ -1.05
FOXN3-204ENST00000553840 C7orf65Q6ZTY9 151 aa8.52□□□□□ -1.05
FOXN3-204ENST00000553840 Q5W150 140 aa8.48□□□□□ -1.05
FOXN3-204ENST00000553840 LINC00643Q86TS7 51 aa8.48□□□□□ -1.05
FOXN3-204ENST00000553840 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.47□□□□□ -1.05
FOXN3-204ENST00000553840 ATP5EP2Q5VTU8 51 aa8.47□□□□□ -1.05
FOXN3-204ENST00000553840 USH2AO75445 5202 aa8.45□□□□□ -1.06
FOXN3-204ENST00000553840 LOC100996750A0A140TA64 210 aa8.44□□□□□ -1.06
FOXN3-204ENST00000553840 KRTAP19-1Q8IUB9 90 aa8.44□□□□□ -1.06
FOXN3-204ENST00000553840 KRTAP4-6Q9BYQ5 205 aa8.44□□□□□ -1.06
FOXN3-204ENST00000553840 HIST1H4AP62805 103 aaKnown RBP8.42□□□□□ -1.06
FOXN3-204ENST00000553840 KRTAP9-7A8MTY7 169 aa8.4□□□□□ -1.06
FOXN3-204ENST00000553840 MT-ATP8P03928 68 aa8.4□□□□□ -1.06
FOXN3-204ENST00000553840 SCGB1A1P11684 91 aa8.4□□□□□ -1.06
FOXN3-204ENST00000553840 SSPOA2VEC9 5147 aa8.39□□□□□ -1.07
FOXN3-204ENST00000553840 IMUPQ9GZP8 106 aa8.38□□□□□ -1.07
FOXN3-204ENST00000553840 C4orf26Q17RF5 130 aa8.36□□□□□ -1.07
FOXN3-204ENST00000553840 TP53AIP1Q9HCN2 124 aa8.35□□□□□ -1.07
FOXN3-204ENST00000553840 A0A087WVE0 104 aa8.32□□□□□ -1.08
FOXN3-204ENST00000553840 KRTAP19-6Q3LI70 58 aa8.29□□□□□ -1.08
FOXN3-204ENST00000553840 FCGBPQ9Y6R7 5405 aaPredicted RBP8.24□□□□□ -1.09
FOXN3-204ENST00000553840 PCP4P48539 62 aa8.22□□□□□ -1.09
FOXN3-204ENST00000553840 C5orf47Q569G3 176 aa8.22□□□□□ -1.09
FOXN3-204ENST00000553840 C1orf64Q8NEQ6 169 aa8.22□□□□□ -1.09
FOXN3-204ENST00000553840 S4R3F8 94 aa8.22□□□□□ -1.09
FOXN3-204ENST00000553840 TRAV22A0A0B4J277 110 aa8.21□□□□□ -1.1
FOXN3-204ENST00000553840 UQCRQO14949 82 aa8.2□□□□□ -1.1
FOXN3-204ENST00000553840 FAM236AA0A1B0GUQ0 79 aa8.19□□□□□ -1.1
FOXN3-204ENST00000553840 FAM236BA0A1B0GV22 79 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms