RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 NDUFV3P56181 108 aaKnown RBP3.63□□□□□ -1.83
ATXN3-219ENST00000553488 PCP2Q8IVA1 136 aa3.63□□□□□ -1.83
ATXN3-219ENST00000553488 KRTAP10-10P60014 251 aa3.62□□□□□ -1.83
ATXN3-219ENST00000553488 HSD52Q0P140 79 aa3.62□□□□□ -1.83
ATXN3-219ENST00000553488 KRTAP6-3Q3LI67 103 aa3.62□□□□□ -1.83
ATXN3-219ENST00000553488 C20orf166-AS1Q96NR2 134 aa3.62□□□□□ -1.83
ATXN3-219ENST00000553488 TRBV7-7A0A0K0K1E9 115 aa3.61□□□□□ -1.83
ATXN3-219ENST00000553488 A8MUU9 505 aa3.61□□□□□ -1.83
ATXN3-219ENST00000553488 Q6ZVH6 145 aa3.61□□□□□ -1.83
ATXN3-219ENST00000553488 K7EP34 96 aa3.6□□□□□ -1.83
ATXN3-219ENST00000553488 TRBV20-1A0A075B6N2 111 aa3.59□□□□□ -1.83
ATXN3-219ENST00000553488 IGFL1Q6UW32 110 aa3.59□□□□□ -1.83
ATXN3-219ENST00000553488 C2orf91Q6ZV80 131 aa3.59□□□□□ -1.83
ATXN3-219ENST00000553488 CLEC2BQ92478 149 aa3.59□□□□□ -1.83
ATXN3-219ENST00000553488 Q96NJ1 140 aa3.59□□□□□ -1.83
ATXN3-219ENST00000553488 TTTY13Q9BZ97 58 aa3.59□□□□□ -1.83
ATXN3-219ENST00000553488 HIGD1BQ9P298 99 aa3.59□□□□□ -1.83
ATXN3-219ENST00000553488 A0A1W2PPM0 123 aa3.58□□□□□ -1.84
ATXN3-219ENST00000553488 KRTAP16-1A8MUX0 517 aa3.58□□□□□ -1.84
ATXN3-219ENST00000553488 J3QR89 54 aa3.58□□□□□ -1.84
ATXN3-219ENST00000553488 SCGB1A1P11684 91 aa3.58□□□□□ -1.84
ATXN3-219ENST00000553488 FABP2P12104 132 aa3.58□□□□□ -1.84
ATXN3-219ENST00000553488 LINC00846Q9NV44 126 aa3.58□□□□□ -1.84
ATXN3-219ENST00000553488 SPCS1Q9Y6A9 102 aa3.58□□□□□ -1.84
ATXN3-219ENST00000553488 ZNF815PA8K554 130 aa3.57□□□□□ -1.84
ATXN3-219ENST00000553488 F8WEM9 126 aa3.57□□□□□ -1.84
ATXN3-219ENST00000553488 H3BUT2 72 aa3.57□□□□□ -1.84
ATXN3-219ENST00000553488 HRES1P13985 223 aa3.57□□□□□ -1.84
ATXN3-219ENST00000553488 LCE3CQ5T5A8 94 aa3.57□□□□□ -1.84
ATXN3-219ENST00000553488 Q6JHZ5 121 aa3.57□□□□□ -1.84
ATXN3-219ENST00000553488 NHP2Q9NX24 153 aaKnown RBP3.56□□□□□ -1.84
ATXN3-219ENST00000553488 V9GYY9 64 aa3.56□□□□□ -1.84
ATXN3-219ENST00000553488 FAM236DA0A1B0GTK5 79 aa3.55□□□□□ -1.84
ATXN3-219ENST00000553488 FAM236CP0DP71 79 aa3.55□□□□□ -1.84
ATXN3-219ENST00000553488 C5orf47Q569G3 176 aa3.55□□□□□ -1.84
ATXN3-219ENST00000553488 TRAV13-2A0A0B4J235 113 aa3.54□□□□□ -1.84
ATXN3-219ENST00000553488 F8W1H4 67 aa3.54□□□□□ -1.84
ATXN3-219ENST00000553488 LST1O00453 97 aa3.54□□□□□ -1.84
ATXN3-219ENST00000553488 Q6ZQY7 126 aa3.54□□□□□ -1.84
ATXN3-219ENST00000553488 CEND1Q8N111 149 aa3.54□□□□□ -1.84
ATXN3-219ENST00000553488 SMIM11BQ8TCY0 68 aa3.54□□□□□ -1.84
ATXN3-219ENST00000553488 RAB37Q96AX2 223 aa3.54□□□□□ -1.84
ATXN3-219ENST00000553488 A0A1B0GV72 72 aa3.53□□□□□ -1.84
ATXN3-219ENST00000553488 LYRM7Q5U5X0 104 aa3.53□□□□□ -1.84
ATXN3-219ENST00000553488 LINC00575Q6W349 94 aa3.53□□□□□ -1.84
ATXN3-219ENST00000553488 SIGMAR1Q99720 223 aa3.53□□□□□ -1.84
ATXN3-219ENST00000553488 MDN1Q9NU22 5596 aa3.53□□□□□ -1.84
ATXN3-219ENST00000553488 IFITM1P13164 125 aa3.52□□□□□ -1.85
ATXN3-219ENST00000553488 FXYD2P54710 66 aa3.52□□□□□ -1.85
ATXN3-219ENST00000553488 DSCR10P59022 87 aa3.51□□□□□ -1.85
ATXN3-219ENST00000553488 COPS9Q8WXC6 57 aa3.51□□□□□ -1.85
ATXN3-219ENST00000553488 HIST1H4GQ99525 98 aa3.51□□□□□ -1.85
ATXN3-219ENST00000553488 RBM12B-AS1Q9P1G2 102 aa3.51□□□□□ -1.85
ATXN3-219ENST00000553488 hADV29S1A0JD25 119 aa3.5□□□□□ -1.85
ATXN3-219ENST00000553488 KRTAP5-1Q6L8H4 278 aa3.5□□□□□ -1.85
ATXN3-219ENST00000553488 SCGB1D4Q6XE38 83 aa3.5□□□□□ -1.85
ATXN3-219ENST00000553488 MUSTN1Q8IVN3 82 aa3.5□□□□□ -1.85
ATXN3-219ENST00000553488 NAA38Q9BRA0 125 aaKnown RBP3.5□□□□□ -1.85
ATXN3-219ENST00000553488 SS18L2Q9UHA2 77 aa3.5□□□□□ -1.85
ATXN3-219ENST00000553488 H3BMG7 143 aa3.48□□□□□ -1.85
ATXN3-219ENST00000553488 K7ERJ3 54 aa3.48□□□□□ -1.85
ATXN3-219ENST00000553488 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-219ENST00000553488 PPDPFLQ8WWR9 84 aa3.48□□□□□ -1.85
ATXN3-219ENST00000553488 KMT2DO14686 5537 aa3.48□□□□□ -1.85
ATXN3-219ENST00000553488 A0A087WSZ3 146 aa3.47□□□□□ -1.85
ATXN3-219ENST00000553488 ETDBQ3ZM63 59 aa3.47□□□□□ -1.85
ATXN3-219ENST00000553488 PRO0461Q9UI25 63 aa3.47□□□□□ -1.85
ATXN3-219ENST00000553488 KRTAP20-1Q3LI63 56 aa3.46□□□□□ -1.86
ATXN3-219ENST00000553488 TEN1Q86WV5 123 aa3.46□□□□□ -1.86
ATXN3-219ENST00000553488 A8MWP4 228 aa3.45□□□□□ -1.86
ATXN3-219ENST00000553488 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
ATXN3-219ENST00000553488 PSMB2P49721 201 aa3.44□□□□□ -1.86
ATXN3-219ENST00000553488 LINC00313P59037 77 aa3.44□□□□□ -1.86
ATXN3-219ENST00000553488 CXCL6P80162 114 aa3.44□□□□□ -1.86
ATXN3-219ENST00000553488 A0A0B4J2C4 111 aa3.42□□□□□ -1.86
ATXN3-219ENST00000553488 SCGB1C2P0DMR2 95 aa3.42□□□□□ -1.86
ATXN3-219ENST00000553488 PRO1854Q9UHT4 67 aa3.42□□□□□ -1.86
ATXN3-219ENST00000553488 A0A1W2PNM2 257 aa3.41□□□□□ -1.86
ATXN3-219ENST00000553488 SNCGO76070 127 aa3.4□□□□□ -1.87
ATXN3-219ENST00000553488 MT-ATP8P03928 68 aa3.4□□□□□ -1.87
ATXN3-219ENST00000553488 IGKV4-1P06312 121 aa3.4□□□□□ -1.87
ATXN3-219ENST00000553488 ATXN8Q156A1 80 aa3.4□□□□□ -1.87
ATXN3-219ENST00000553488 ANKRD29Q8N6D5 301 aa3.4□□□□□ -1.87
ATXN3-219ENST00000553488 ANAPC13Q9BS18 74 aa3.4□□□□□ -1.87
ATXN3-219ENST00000553488 COX6CP09669 75 aa3.39□□□□□ -1.87
ATXN3-219ENST00000553488 KRTAP5-9P26371 169 aa3.39□□□□□ -1.87
ATXN3-219ENST00000553488 C9JAW5 83 aa3.38□□□□□ -1.87
ATXN3-219ENST00000553488 H3BT86 120 aa3.38□□□□□ -1.87
ATXN3-219ENST00000553488 SPINK7P58062 85 aa3.38□□□□□ -1.87
ATXN3-219ENST00000553488 ZCCHC13Q8WW36 166 aaKnown RBP3.38□□□□□ -1.87
ATXN3-219ENST00000553488 LINC00472Q9H8W2 130 aa3.38□□□□□ -1.87
ATXN3-219ENST00000553488 IGHV6-1A0A0B4J1U7 121 aa3.37□□□□□ -1.87
ATXN3-219ENST00000553488 FAM240AA0A1B0GVK7 77 aa3.37□□□□□ -1.87
ATXN3-219ENST00000553488 DEFB116Q30KQ4 102 aa3.36□□□□□ -1.87
ATXN3-219ENST00000553488 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
ATXN3-219ENST00000553488 WFDC13Q8IUB5 93 aa3.36□□□□□ -1.87
ATXN3-219ENST00000553488 TRBV7-4A0A0J9YYF1 115 aa3.35□□□□□ -1.87
ATXN3-219ENST00000553488 ACYP1P07311 99 aa3.35□□□□□ -1.87
ATXN3-219ENST00000553488 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
ATXN3-219ENST00000553488 A0A1B0GVX0 72 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms