RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 Q8N814 137 aa2.93□□□□□ -1.94
ATXN3-218ENST00000553309 Q9BRP9 147 aa2.93□□□□□ -1.94
ATXN3-218ENST00000553309 LINC00467Q9BRT7 94 aa2.93□□□□□ -1.94
ATXN3-218ENST00000553309 PRR15LQ9BU68 103 aa2.93□□□□□ -1.94
ATXN3-218ENST00000553309 ORMDL1Q9P0S3 153 aa2.93□□□□□ -1.94
ATXN3-218ENST00000553309 IGHV3OR16-8A0A075B7F1 116 aa2.92□□□□□ -1.94
ATXN3-218ENST00000553309 A0A087WTM6 91 aa2.92□□□□□ -1.94
ATXN3-218ENST00000553309 H3BRN7 92 aa2.92□□□□□ -1.94
ATXN3-218ENST00000553309 CCL18P55774 89 aa2.92□□□□□ -1.94
ATXN3-218ENST00000553309 PP632Q6XCG6 107 aa2.92□□□□□ -1.94
ATXN3-218ENST00000553309 LOC110117498A0A087WWA1 95 aa2.91□□□□□ -1.94
ATXN3-218ENST00000553309 LRCOL1A6NCL2 159 aa2.91□□□□□ -1.94
ATXN3-218ENST00000553309 H3BQ85 93 aa2.91□□□□□ -1.94
ATXN3-218ENST00000553309 IGKV1-17P01599 117 aa2.91□□□□□ -1.94
ATXN3-218ENST00000553309 SPART-AS1P0CW21 52 aa2.91□□□□□ -1.94
ATXN3-218ENST00000553309 KRTAP5-2Q701N4 177 aa2.91□□□□□ -1.94
ATXN3-218ENST00000553309 MIR7-3HGQ8N6C7 128 aa2.91□□□□□ -1.94
ATXN3-218ENST00000553309 ZCCHC13Q8WW36 166 aaKnown RBP2.91□□□□□ -1.94
ATXN3-218ENST00000553309 IGLV11-55A0A075B6I3 123 aa2.9□□□□□ -1.95
ATXN3-218ENST00000553309 IGHV1OR15-1A0A075B7D0 117 aa2.9□□□□□ -1.95
ATXN3-218ENST00000553309 IGHV3-49A0A0A0MS15 119 aa2.9□□□□□ -1.95
ATXN3-218ENST00000553309 TRBV6-5A0A0K0K1A5 114 aa2.9□□□□□ -1.95
ATXN3-218ENST00000553309 K7EIM0 57 aa2.9□□□□□ -1.95
ATXN3-218ENST00000553309 NCR3O14931 201 aa2.9□□□□□ -1.95
ATXN3-218ENST00000553309 IGHV3-30-3P0DP02 117 aa2.9□□□□□ -1.95
ATXN3-218ENST00000553309 DEFB131AP59861 70 aa2.9□□□□□ -1.95
ATXN3-218ENST00000553309 C10orf55Q5SWW7 151 aa2.9□□□□□ -1.95
ATXN3-218ENST00000553309 SPANXA2-OT1Q8N9U9 137 aa2.9□□□□□ -1.95
ATXN3-218ENST00000553309 C20orf203Q8NBC4 194 aa2.9□□□□□ -1.95
ATXN3-218ENST00000553309 LINC00308Q8TCZ7 52 aa2.9□□□□□ -1.95
ATXN3-218ENST00000553309 LENEPQ9Y5L5 61 aa2.9□□□□□ -1.95
ATXN3-218ENST00000553309 TRBV10-1A0A0K0K1A3 114 aa2.89□□□□□ -1.95
ATXN3-218ENST00000553309 NDUFA1O15239 70 aa2.89□□□□□ -1.95
ATXN3-218ENST00000553309 IGHV3-48P01763 117 aa2.89□□□□□ -1.95
ATXN3-218ENST00000553309 ROMO1P60602 79 aa2.89□□□□□ -1.95
ATXN3-218ENST00000553309 HIGD2AQ9BW72 106 aa2.89□□□□□ -1.95
ATXN3-218ENST00000553309 LINC01558Q9Y6Z2 57 aa2.89□□□□□ -1.95
ATXN3-218ENST00000553309 IGHV3-74A0A0B4J1X5 117 aa2.88□□□□□ -1.95
ATXN3-218ENST00000553309 LINC00208Q96KT6 92 aa2.88□□□□□ -1.95
ATXN3-218ENST00000553309 IGHV3-73A0A0B4J1V6 119 aa2.87□□□□□ -1.95
ATXN3-218ENST00000553309 CRPP02741 224 aa2.87□□□□□ -1.95
ATXN3-218ENST00000553309 CNBPP62633 177 aaKnown RBP2.87□□□□□ -1.95
ATXN3-218ENST00000553309 RNASE13Q5GAN3 156 aaKnown RBP2.87□□□□□ -1.95
ATXN3-218ENST00000553309 Q6ZQT0 140 aa2.87□□□□□ -1.95
ATXN3-218ENST00000553309 ZFAND2AQ8N6M9 145 aa2.87□□□□□ -1.95
ATXN3-218ENST00000553309 PLAC8Q9NZF1 115 aa2.87□□□□□ -1.95
ATXN3-218ENST00000553309 IGKV2-29A2NJV5 120 aaPredicted RBP2.86□□□□□ -1.95
ATXN3-218ENST00000553309 POLR2KP53803 58 aaKnown RBP2.86□□□□□ -1.95
ATXN3-218ENST00000553309 CMC4P56277 68 aaPredicted RBP2.86□□□□□ -1.95
ATXN3-218ENST00000553309 RPL37AP61513 92 aaKnown RBP2.86□□□□□ -1.95
ATXN3-218ENST00000553309 Q6ZSA8 131 aa2.86□□□□□ -1.95
ATXN3-218ENST00000553309 IGHV3-21A0A0B4J1V1 117 aa2.85□□□□□ -1.95
ATXN3-218ENST00000553309 LECT2O14960 151 aa2.85□□□□□ -1.95
ATXN3-218ENST00000553309 RHPN1-AS1Q9BWJ2 59 aa2.85□□□□□ -1.95
ATXN3-218ENST00000553309 IGHV3-66A0A0C4DH42 116 aa2.84□□□□□ -1.95
ATXN3-218ENST00000553309 IGHV7-4-1A0A0J9YVY3 117 aa2.84□□□□□ -1.95
ATXN3-218ENST00000553309 H3BPC8 53 aa2.84□□□□□ -1.95
ATXN3-218ENST00000553309 CHTF8P0CG12 524 aa2.84□□□□□ -1.95
ATXN3-218ENST00000553309 DEFB130BP0DP73 79 aa2.84□□□□□ -1.95
ATXN3-218ENST00000553309 DEFB130AP0DP74 79 aa2.84□□□□□ -1.95
ATXN3-218ENST00000553309 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.84□□□□□ -1.95
ATXN3-218ENST00000553309 Q8NDZ9 215 aa2.84□□□□□ -1.95
ATXN3-218ENST00000553309 COX7B2Q8TF08 81 aa2.84□□□□□ -1.95
ATXN3-218ENST00000553309 IGKV2-40A0A087WW87 121 aaPredicted RBP2.83□□□□□ -1.96
ATXN3-218ENST00000553309 A0A1W2PNM2 257 aa2.83□□□□□ -1.96
ATXN3-218ENST00000553309 NDUFA4O00483 81 aa2.83□□□□□ -1.96
ATXN3-218ENST00000553309 IGKV2D-40P01614 121 aaPredicted RBP2.83□□□□□ -1.96
ATXN3-218ENST00000553309 SPAG11BQ08648 103 aa2.83□□□□□ -1.96
ATXN3-218ENST00000553309 SPAG11AQ6PDA7 123 aa2.83□□□□□ -1.96
ATXN3-218ENST00000553309 CIRBP-AS1Q8TBR5 109 aa2.83□□□□□ -1.96
ATXN3-218ENST00000553309 SMIM11BQ8TCY0 68 aa2.83□□□□□ -1.96
ATXN3-218ENST00000553309 IGHV3-64A0A075B6Q5 118 aa2.82□□□□□ -1.96
ATXN3-218ENST00000553309 A0A087WSZ3 146 aa2.82□□□□□ -1.96
ATXN3-218ENST00000553309 ETDCA0A1B0GVM5 59 aa2.82□□□□□ -1.96
ATXN3-218ENST00000553309 IGHV3-53P01767 116 aa2.82□□□□□ -1.96
ATXN3-218ENST00000553309 MIR22HGQ0VDD5 57 aa2.82□□□□□ -1.96
ATXN3-218ENST00000553309 NTM-AS1Q6ZSK4 140 aa2.82□□□□□ -1.96
ATXN3-218ENST00000553309 Q6ZTI0 123 aa2.82□□□□□ -1.96
ATXN3-218ENST00000553309 ADM2Q7Z4H4 148 aa2.82□□□□□ -1.96
ATXN3-218ENST00000553309 C7orf33Q8WU49 177 aa2.82□□□□□ -1.96
ATXN3-218ENST00000553309 RPL39LQ96EH5 51 aaKnown RBP2.82□□□□□ -1.96
ATXN3-218ENST00000553309 K7ERS5 55 aa2.81□□□□□ -1.96
ATXN3-218ENST00000553309 IGKV4-1P06312 121 aa2.81□□□□□ -1.96
ATXN3-218ENST00000553309 RPL39P62891 51 aaKnown RBP2.81□□□□□ -1.96
ATXN3-218ENST00000553309 CSAG1Q6PB30 78 aa2.81□□□□□ -1.96
ATXN3-218ENST00000553309 Q8TAT8 98 aa2.81□□□□□ -1.96
ATXN3-218ENST00000553309 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.8□□□□□ -1.96
ATXN3-218ENST00000553309 TRGV2A0A075B6R0 118 aa2.8□□□□□ -1.96
ATXN3-218ENST00000553309 DEFB1P60022 68 aa2.8□□□□□ -1.96
ATXN3-218ENST00000553309 IGKV2D-24A0A075B6R9 120 aa2.79□□□□□ -1.96
ATXN3-218ENST00000553309 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.79□□□□□ -1.96
ATXN3-218ENST00000553309 H0Y9P7 68 aa2.79□□□□□ -1.96
ATXN3-218ENST00000553309 SPINK7P58062 85 aa2.79□□□□□ -1.96
ATXN3-218ENST00000553309 CAMK2N2Q96S95 79 aa2.79□□□□□ -1.96
ATXN3-218ENST00000553309 KCNQ1DNQ9H478 68 aa2.79□□□□□ -1.96
ATXN3-218ENST00000553309 IGLV4-60A0A075B6I1 120 aa2.78□□□□□ -1.96
ATXN3-218ENST00000553309 IGKV2-28A0A075B6P5 120 aa2.78□□□□□ -1.96
ATXN3-218ENST00000553309 IGKV2D-28P01615 120 aa2.78□□□□□ -1.96
ATXN3-218ENST00000553309 MGPP08493 103 aa2.78□□□□□ -1.96
ATXN3-218ENST00000553309 SPATA8Q6RVD6 105 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms