RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-233ENST00000552433 TRRAPQ9Y4A5 3859 aa3.45□□□□□ -1.86
LETMD1-233ENST00000552433 TENM1Q9UKZ4 2725 aa3.44□□□□□ -1.86
LETMD1-233ENST00000552433 DEFB131BA0A096LNP1 70 aa3.44□□□□□ -1.86
LETMD1-233ENST00000552433 CPSF4LA6NMK7 179 aaKnown RBP3.44□□□□□ -1.86
LETMD1-233ENST00000552433 ARHGAP5-AS1Q96IT6 56 aa3.44□□□□□ -1.86
LETMD1-233ENST00000552433 CADP27708 2225 aa3.44□□□□□ -1.86
LETMD1-233ENST00000552433 M0R2N4 97 aa3.43□□□□□ -1.86
LETMD1-233ENST00000552433 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
LETMD1-233ENST00000552433 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
LETMD1-233ENST00000552433 KMT2CQ8NEZ4 4911 aaKnown RBP3.42□□□□□ -1.86
LETMD1-233ENST00000552433 PRB2P02812 416 aaPredicted RBP3.42□□□□□ -1.86
LETMD1-233ENST00000552433 DEFB106AQ8N104 65 aa3.42□□□□□ -1.86
LETMD1-233ENST00000552433 LINC00308Q8TCZ7 52 aa3.42□□□□□ -1.86
LETMD1-233ENST00000552433 CCL19Q99731 98 aa3.42□□□□□ -1.86
LETMD1-233ENST00000552433 H3BRN7 92 aa3.4□□□□□ -1.87
LETMD1-233ENST00000552433 STATHP02808 62 aa3.4□□□□□ -1.87
LETMD1-233ENST00000552433 RYR3Q15413 4870 aa3.4□□□□□ -1.87
LETMD1-233ENST00000552433 Q6ZQY7 126 aa3.4□□□□□ -1.87
LETMD1-233ENST00000552433 COX14Q96I36 57 aa3.4□□□□□ -1.87
LETMD1-233ENST00000552433 NDUFA1O15239 70 aa3.39□□□□□ -1.87
LETMD1-233ENST00000552433 DEFB110Q30KQ9 67 aa3.38□□□□□ -1.87
LETMD1-233ENST00000552433 LINC01590Q5TEZ4 76 aa3.38□□□□□ -1.87
LETMD1-233ENST00000552433 VWFP04275 2813 aa3.38□□□□□ -1.87
LETMD1-233ENST00000552433 BIRC6Q9NR09 4857 aa3.37□□□□□ -1.87
LETMD1-233ENST00000552433 LY6G6CO95867 125 aa3.37□□□□□ -1.87
LETMD1-233ENST00000552433 LINC00158P58513 81 aa3.37□□□□□ -1.87
LETMD1-233ENST00000552433 LINC00315P59091 139 aa3.36□□□□□ -1.87
LETMD1-233ENST00000552433 CRIP1P50238 77 aa3.35□□□□□ -1.87
LETMD1-233ENST00000552433 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.35□□□□□ -1.87
LETMD1-233ENST00000552433 CMYA5Q8N3K9 4069 aa3.34□□□□□ -1.88
LETMD1-233ENST00000552433 PLCE1Q9P212 2302 aa3.33□□□□□ -1.88
LETMD1-233ENST00000552433 SMIM11BQ8TCY0 68 aa3.33□□□□□ -1.88
LETMD1-233ENST00000552433 TTTY10Q9BZA0 68 aa3.33□□□□□ -1.88
LETMD1-233ENST00000552433 SSBP3-AS1Q7Z2R9 100 aa3.32□□□□□ -1.88
LETMD1-233ENST00000552433 Q8IZM0 81 aa3.32□□□□□ -1.88
LETMD1-233ENST00000552433 PLAC4Q8WY50 150 aa3.32□□□□□ -1.88
LETMD1-233ENST00000552433 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
LETMD1-233ENST00000552433 TENM3Q9P273 2699 aa3.31□□□□□ -1.88
LETMD1-233ENST00000552433 DEFB108AA8MXU0 73 aa3.31□□□□□ -1.88
LETMD1-233ENST00000552433 ANGP03950 147 aaKnown RBP3.31□□□□□ -1.88
LETMD1-233ENST00000552433 C10orf99Q6UWK7 81 aa3.31□□□□□ -1.88
LETMD1-233ENST00000552433 Q6ZRX8 168 aa3.31□□□□□ -1.88
LETMD1-233ENST00000552433 EPPK1P58107 5090 aaKnown RBP3.3□□□□□ -1.88
LETMD1-233ENST00000552433 WNK2Q9Y3S1 2297 aa3.3□□□□□ -1.88
LETMD1-233ENST00000552433 A0A096LNT2 108 aa3.29□□□□□ -1.88
LETMD1-233ENST00000552433 G3V318 75 aa3.29□□□□□ -1.88
LETMD1-233ENST00000552433 CDKN2A-AS1Q9UH64 79 aa3.29□□□□□ -1.88
LETMD1-233ENST00000552433 IGKV2D-24A0A075B6R9 120 aa3.28□□□□□ -1.88
LETMD1-233ENST00000552433 Q8N9L7 120 aa3.28□□□□□ -1.88
LETMD1-233ENST00000552433 GVQW2A0A096LPI5 108 aaPredicted RBP3.26□□□□□ -1.89
LETMD1-233ENST00000552433 PP632Q6XCG6 107 aa3.26□□□□□ -1.89
LETMD1-233ENST00000552433 PCLOQ9Y6V0 5065 aa3.24□□□□□ -1.89
LETMD1-233ENST00000552433 IGKV2-28A0A075B6P5 120 aa3.24□□□□□ -1.89
LETMD1-233ENST00000552433 LYNX1G3V0Z9 82 aa3.24□□□□□ -1.89
LETMD1-233ENST00000552433 IGKV2D-28P01615 120 aa3.24□□□□□ -1.89
LETMD1-233ENST00000552433 COL7A1Q02388 2944 aa3.24□□□□□ -1.89
LETMD1-233ENST00000552433 H0YGG7 62 aa3.23□□□□□ -1.89
LETMD1-233ENST00000552433 POLR2KP53803 58 aaKnown RBP3.23□□□□□ -1.89
LETMD1-233ENST00000552433 RYR2Q92736 4967 aa3.23□□□□□ -1.89
LETMD1-233ENST00000552433 TENM2Q9NT68 2774 aa3.23□□□□□ -1.89
LETMD1-233ENST00000552433 HYDINQ4G0P3 5121 aa3.22□□□□□ -1.89
LETMD1-233ENST00000552433 STAB2Q8WWQ8 2551 aa3.22□□□□□ -1.89
LETMD1-233ENST00000552433 LINC00575Q6W349 94 aa3.22□□□□□ -1.89
LETMD1-233ENST00000552433 TP53AIP1Q9HCN2 124 aa3.22□□□□□ -1.89
LETMD1-233ENST00000552433 DYNC2H1Q8NCM8 4307 aaKnown RBP3.21□□□□□ -1.9
LETMD1-233ENST00000552433 RYR1P21817 5038 aa3.21□□□□□ -1.9
LETMD1-233ENST00000552433 Q6ZRN7 208 aaPredicted RBP3.2□□□□□ -1.9
LETMD1-233ENST00000552433 SPINK13Q1W4C9 94 aa3.18□□□□□ -1.9
LETMD1-233ENST00000552433 COX6B2Q6YFQ2 88 aa3.18□□□□□ -1.9
LETMD1-233ENST00000552433 CRIPTQ9P021 101 aa3.18□□□□□ -1.9
LETMD1-233ENST00000552433 IGKV2-24A0A0C4DH68 120 aa3.17□□□□□ -1.9
LETMD1-233ENST00000552433 LYSTQ99698 3801 aa3.16□□□□□ -1.9
LETMD1-233ENST00000552433 H3BSH0 61 aa3.16□□□□□ -1.9
LETMD1-233ENST00000552433 KRTAP13-2Q52LG2 175 aa3.16□□□□□ -1.9
LETMD1-233ENST00000552433 HERC2O95714 4834 aa3.15□□□□□ -1.9
LETMD1-233ENST00000552433 SORL1Q92673 2214 aa3.15□□□□□ -1.9
LETMD1-233ENST00000552433 CCL22O00626 93 aa3.15□□□□□ -1.91
LETMD1-233ENST00000552433 PRR9Q5T870 116 aa3.15□□□□□ -1.91
LETMD1-233ENST00000552433 DNAH3Q8TD57 4116 aa3.15□□□□□ -1.91
LETMD1-233ENST00000552433 DNAH1Q9P2D7 4330 aa3.15□□□□□ -1.91
LETMD1-233ENST00000552433 K7EQZ3 153 aa3.14□□□□□ -1.91
LETMD1-233ENST00000552433 PRB3Q04118 309 aaPredicted RBP3.13□□□□□ -1.91
LETMD1-233ENST00000552433 SACSQ9NZJ4 4579 aa3.13□□□□□ -1.91
LETMD1-233ENST00000552433 DNAH7Q8WXX0 4024 aa3.12□□□□□ -1.91
LETMD1-233ENST00000552433 RPL39P62891 51 aaKnown RBP3.12□□□□□ -1.91
LETMD1-233ENST00000552433 MINOS1Q5TGZ0 78 aa3.12□□□□□ -1.91
LETMD1-233ENST00000552433 CSMD3Q7Z407 3707 aa3.11□□□□□ -1.91
LETMD1-233ENST00000552433 PRCDQ00LT1 54 aa3.11□□□□□ -1.91
LETMD1-233ENST00000552433 USMG5Q96IX5 58 aa3.11□□□□□ -1.91
LETMD1-233ENST00000552433 C6orf48Q9UBA6 75 aa3.11□□□□□ -1.91
LETMD1-233ENST00000552433 FRAS1Q86XX4 4008 aa3.1□□□□□ -1.91
LETMD1-233ENST00000552433 K7EIL1 84 aa3.1□□□□□ -1.91
LETMD1-233ENST00000552433 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
LETMD1-233ENST00000552433 UBE2DNLQ8IWF7 75 aa3.1□□□□□ -1.91
LETMD1-233ENST00000552433 DNAH9Q9NYC9 4486 aa3.09□□□□□ -1.91
LETMD1-233ENST00000552433 IGLV5-48A0A075B6I7 105 aa3.09□□□□□ -1.91
LETMD1-233ENST00000552433 IGFL1Q6UW32 110 aa3.09□□□□□ -1.91
LETMD1-233ENST00000552433 RPL39LQ96EH5 51 aaKnown RBP3.09□□□□□ -1.91
LETMD1-233ENST00000552433 HECTD4Q9Y4D8 3996 aa3.09□□□□□ -1.92
LETMD1-233ENST00000552433 RPL37P61927 97 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms