RNA–Protein interactions for RNA: ENST00000551492.5

NPAS3-210, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NPAS3, Length 2,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-210ENST00000551492 KRTAP29-1A8MX34 341 aaPredicted RBP12.96□□□□□ -0.34
NPAS3-210ENST00000551492 A0A096LNI7 61 aa12.95□□□□□ -0.34
NPAS3-210ENST00000551492 DNAH17Q9UFH2 4485 aa12.94□□□□□ -0.34
NPAS3-210ENST00000551492 H3BPC8 53 aa12.92□□□□□ -0.34
NPAS3-210ENST00000551492 HRES1P13985 223 aa12.92□□□□□ -0.34
NPAS3-210ENST00000551492 KRTAP7-1Q8IUC3 87 aa12.92□□□□□ -0.34
NPAS3-210ENST00000551492 A0A087WTM6 91 aa12.91□□□□□ -0.34
NPAS3-210ENST00000551492 FAT2Q9NYQ8 4349 aa12.91□□□□□ -0.34
NPAS3-210ENST00000551492 A0A1B0GW54 56 aa12.9□□□□□ -0.34
NPAS3-210ENST00000551492 DNAH5Q8TE73 4624 aa12.89□□□□□ -0.35
NPAS3-210ENST00000551492 RYR3Q15413 4870 aa12.89□□□□□ -0.35
NPAS3-210ENST00000551492 IGLV5-37A0A075B6J1 123 aa12.88□□□□□ -0.35
NPAS3-210ENST00000551492 KRTAP10-2P60368 255 aa12.88□□□□□ -0.35
NPAS3-210ENST00000551492 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.84□□□□□ -0.35
NPAS3-210ENST00000551492 RYR2Q92736 4967 aa12.83□□□□□ -0.36
NPAS3-210ENST00000551492 ALMS1Q8TCU4 4167 aa12.82□□□□□ -0.36
NPAS3-210ENST00000551492 A0A087WSZ3 146 aa12.82□□□□□ -0.36
NPAS3-210ENST00000551492 KRTAP11-1Q8IUC1 163 aa12.81□□□□□ -0.36
NPAS3-210ENST00000551492 PKD1P98161 4303 aa12.8□□□□□ -0.36
NPAS3-210ENST00000551492 ASB16-AS1Q495Z4 193 aa12.79□□□□□ -0.36
NPAS3-210ENST00000551492 DNAH8Q96JB1 4490 aa12.77□□□□□ -0.36
NPAS3-210ENST00000551492 IGLV5-52A0A0A0MRZ9 124 aa12.75□□□□□ -0.37
NPAS3-210ENST00000551492 ROMO1P60602 79 aa12.74□□□□□ -0.37
NPAS3-210ENST00000551492 A0A0A0MQY5 61 aa12.74□□□□□ -0.37
NPAS3-210ENST00000551492 IGFL1Q6UW32 110 aa12.71□□□□□ -0.37
NPAS3-210ENST00000551492 IGHV6-1A0A0B4J1U7 121 aa12.7□□□□□ -0.38
NPAS3-210ENST00000551492 C14orf177Q52M58 125 aa12.7□□□□□ -0.38
NPAS3-210ENST00000551492 Q6ZRX8 168 aa12.7□□□□□ -0.38
NPAS3-210ENST00000551492 LRP1BQ9NZR2 4599 aa12.69□□□□□ -0.38
NPAS3-210ENST00000551492 TLX1NBP0CAT3 122 aa12.69□□□□□ -0.38
NPAS3-210ENST00000551492 DHRS4-AS1Q9P1J3 65 aa12.66□□□□□ -0.38
NPAS3-210ENST00000551492 PRLHP81277 87 aa12.66□□□□□ -0.38
NPAS3-210ENST00000551492 SPATA8Q6RVD6 105 aa12.65□□□□□ -0.38
NPAS3-210ENST00000551492 KRTAP10-1P60331 282 aa12.63□□□□□ -0.39
NPAS3-210ENST00000551492 REG3GQ6UW15 175 aa12.63□□□□□ -0.39
NPAS3-210ENST00000551492 DYNC1H1Q14204 4646 aaKnown RBP12.6□□□□□ -0.39
NPAS3-210ENST00000551492 MIR22HGQ0VDD5 57 aa12.6□□□□□ -0.39
NPAS3-210ENST00000551492 FAT1Q14517 4588 aa12.57□□□□□ -0.4
NPAS3-210ENST00000551492 A0A087X002 238 aa12.57□□□□□ -0.4
NPAS3-210ENST00000551492 KRTAP4-16G5E9R7 235 aaPredicted RBP12.57□□□□□ -0.4
NPAS3-210ENST00000551492 P0C880 135 aa12.57□□□□□ -0.4
NPAS3-210ENST00000551492 A8MWP4 228 aa12.57□□□□□ -0.4
NPAS3-210ENST00000551492 SPACA4Q8TDM5 124 aa12.57□□□□□ -0.4
NPAS3-210ENST00000551492 MMP24-AS1A0A0U1RRL7 71 aa12.56□□□□□ -0.4
NPAS3-210ENST00000551492 A0A1B0GU69 56 aa12.54□□□□□ -0.4
NPAS3-210ENST00000551492 ZNF861PO60384 105 aa12.54□□□□□ -0.4
NPAS3-210ENST00000551492 CIRBP-AS1Q8TBR5 109 aa12.53□□□□□ -0.4
NPAS3-210ENST00000551492 SMR3BP02814 79 aaPredicted RBP12.5□□□□□ -0.41
NPAS3-210ENST00000551492 VPS13BQ7Z7G8 4022 aa12.5□□□□□ -0.41
NPAS3-210ENST00000551492 EPPK1P58107 5090 aaKnown RBP12.48□□□□□ -0.41
NPAS3-210ENST00000551492 PLA2G2DQ9UNK4 145 aa12.47□□□□□ -0.41
NPAS3-210ENST00000551492 ANAPC11Q9NYG5 84 aa12.47□□□□□ -0.41
NPAS3-210ENST00000551492 LINC00472Q9H8W2 130 aa12.46□□□□□ -0.42
NPAS3-210ENST00000551492 FLG2Q5D862 2391 aaPredicted RBP12.45□□□□□ -0.42
NPAS3-210ENST00000551492 PSORS1C2Q9UIG4 136 aa12.44□□□□□ -0.42
NPAS3-210ENST00000551492 UQCR11O14957 56 aa12.43□□□□□ -0.42
NPAS3-210ENST00000551492 SPRR1AP35321 89 aa12.42□□□□□ -0.42
NPAS3-210ENST00000551492 KRTAP25-1Q3LHN0 102 aa12.41□□□□□ -0.42
NPAS3-210ENST00000551492 IGLV8-61A0A075B6I0 122 aa12.4□□□□□ -0.42
NPAS3-210ENST00000551492 APOBP04114 4563 aaKnown RBP12.37□□□□□ -0.43
NPAS3-210ENST00000551492 KIAA1109Q2LD37 5005 aa12.37□□□□□ -0.43
NPAS3-210ENST00000551492 TP53AIP1Q9HCN2 124 aa12.34□□□□□ -0.43
NPAS3-210ENST00000551492 A0A1B0GVY2 172 aa12.32□□□□□ -0.44
NPAS3-210ENST00000551492 CRIPTQ9P021 101 aa12.32□□□□□ -0.44
NPAS3-210ENST00000551492 ACYP2P14621 99 aa12.3□□□□□ -0.44
NPAS3-210ENST00000551492 A8MUU9 505 aa12.29□□□□□ -0.44
NPAS3-210ENST00000551492 Q6ZSA8 131 aa12.25□□□□□ -0.45
NPAS3-210ENST00000551492 C8orf17Q9NRJ1 99 aa12.22□□□□□ -0.45
NPAS3-210ENST00000551492 IGLV9-49A0A0B4J1Y8 123 aa12.21□□□□□ -0.45
NPAS3-210ENST00000551492 LINC00483Q53H64 154 aa12.19□□□□□ -0.46
NPAS3-210ENST00000551492 DMAC1Q96GE9 116 aa12.19□□□□□ -0.46
NPAS3-210ENST00000551492 Q5W150 140 aa12.19□□□□□ -0.46
NPAS3-210ENST00000551492 KRTAP13-1Q8IUC0 172 aa12.18□□□□□ -0.46
NPAS3-210ENST00000551492 NOTCH2NLQ7Z3S9 236 aa12.17□□□□□ -0.46
NPAS3-210ENST00000551492 KRTAP17-1Q9BYP8 105 aa12.16□□□□□ -0.46
NPAS3-210ENST00000551492 IGLV7-43P04211 117 aa12.15□□□□□ -0.46
NPAS3-210ENST00000551492 LRP1Q07954 4544 aaKnown RBP12.14□□□□□ -0.47
NPAS3-210ENST00000551492 HSPG2P98160 4391 aa12.13□□□□□ -0.47
NPAS3-210ENST00000551492 NDUFAF8A1L188 74 aa12.13□□□□□ -0.47
NPAS3-210ENST00000551492 LINC00304Q8N9R0 145 aa12.11□□□□□ -0.47
NPAS3-210ENST00000551492 Q96NJ1 140 aa12.11□□□□□ -0.47
NPAS3-210ENST00000551492 MRPL34Q9BQ48 92 aaKnown RBP12.09□□□□□ -0.47
NPAS3-210ENST00000551492 MYCBP2O75592 4640 aa12.07□□□□□ -0.48
NPAS3-210ENST00000551492 RYR1P21817 5038 aa12.05□□□□□ -0.48
NPAS3-210ENST00000551492 DMBT1Q9UGM3 2413 aaPredicted RBP12.02□□□□□ -0.49
NPAS3-210ENST00000551492 KRTAP16-1A8MUX0 517 aa12.01□□□□□ -0.49
NPAS3-210ENST00000551492 A0A1B0GVX0 72 aa12□□□□□ -0.49
NPAS3-210ENST00000551492 KRTAP13-3Q3SY46 172 aa11.96□□□□□ -0.5
NPAS3-210ENST00000551492 C20orf166-AS1Q96NR2 134 aa11.95□□□□□ -0.5
NPAS3-210ENST00000551492 SSBP3-AS1Q7Z2R9 100 aa11.93□□□□□ -0.5
NPAS3-210ENST00000551492 SPINT4Q6UDR6 99 aa11.93□□□□□ -0.5
NPAS3-210ENST00000551492 KRTAP13-2Q52LG2 175 aa11.89□□□□□ -0.51
NPAS3-210ENST00000551492 H0YAA0 97 aa11.88□□□□□ -0.51
NPAS3-210ENST00000551492 CDK2AP2O75956 126 aa11.88□□□□□ -0.51
NPAS3-210ENST00000551492 KRTAP1-4P0C5Y4 121 aa11.87□□□□□ -0.51
NPAS3-210ENST00000551492 KRTAP10-4P60372 401 aaPredicted RBP11.87□□□□□ -0.51
NPAS3-210ENST00000551492 SPRR1BP22528 89 aa11.85□□□□□ -0.51
NPAS3-210ENST00000551492 Q5VSD8 79 aa11.85□□□□□ -0.51
NPAS3-210ENST00000551492 KRTAP4-5Q9BYR2 181 aa11.83□□□□□ -0.52
NPAS3-210ENST00000551492 SPINK1P00995 79 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms