RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 MAST1Q9Y2H9 1570 aa-1.48□□□□□ -2.65
SCAF11-215ENST00000551391 CEP162Q5TB80 1403 aa-1.49□□□□□ -2.65
SCAF11-215ENST00000551391 CEP290O15078 2479 aa-1.49□□□□□ -2.65
SCAF11-215ENST00000551391 CEBPZOSA8MTT3 80 aa-1.49□□□□□ -2.65
SCAF11-215ENST00000551391 H3BUA1 57 aa-1.49□□□□□ -2.65
SCAF11-215ENST00000551391 HMGA1P17096 107 aaKnown RBP-1.49□□□□□ -2.65
SCAF11-215ENST00000551391 S100PP25815 95 aa-1.49□□□□□ -2.65
SCAF11-215ENST00000551391 ACBD7Q8N6N7 88 aa-1.49□□□□□ -2.65
SCAF11-215ENST00000551391 ITSN2Q9NZM3 1697 aa-1.5□□□□□ -2.65
SCAF11-215ENST00000551391 TLN2Q9Y4G6 2542 aa-1.5□□□□□ -2.65
SCAF11-215ENST00000551391 C14orf144Q96I85 54 aa-1.5□□□□□ -2.65
SCAF11-215ENST00000551391 SUPT6HQ7KZ85 1726 aaKnown RBP-1.5□□□□□ -2.65
SCAF11-215ENST00000551391 DOT1LQ8TEK3 1739 aa-1.51□□□□□ -2.65
SCAF11-215ENST00000551391 M0QZ58 72 aa-1.51□□□□□ -2.65
SCAF11-215ENST00000551391 LINC00643Q86TS7 51 aa-1.51□□□□□ -2.65
SCAF11-215ENST00000551391 C20orf78Q9BR46 151 aa-1.51□□□□□ -2.65
SCAF11-215ENST00000551391 MYO3AQ8NEV4 1616 aa-1.51□□□□□ -2.65
SCAF11-215ENST00000551391 RBP2P50120 134 aa-1.52□□□□□ -2.65
SCAF11-215ENST00000551391 TCEAL7Q9BRU2 100 aa-1.52□□□□□ -2.65
SCAF11-215ENST00000551391 CSMD2Q7Z408 3487 aa-1.53□□□□□ -2.65
SCAF11-215ENST00000551391 DEFB4AO15263 64 aa-1.53□□□□□ -2.65
SCAF11-215ENST00000551391 SNRPFP62306 86 aaKnown RBP-1.53□□□□□ -2.65
SCAF11-215ENST00000551391 NREPQ16612 68 aa-1.53□□□□□ -2.65
SCAF11-215ENST00000551391 MINOS1Q5TGZ0 78 aa-1.53□□□□□ -2.65
SCAF11-215ENST00000551391 DMXL2Q8TDJ6 3036 aa-1.53□□□□□ -2.65
SCAF11-215ENST00000551391 KCNQ1DNQ9H478 68 aa-1.53□□□□□ -2.65
SCAF11-215ENST00000551391 PARP4Q9UKK3 1724 aaKnown RBP-1.53□□□□□ -2.65
SCAF11-215ENST00000551391 ADGRG4Q8IZF6 3080 aa-1.53□□□□□ -2.66
SCAF11-215ENST00000551391 RGPD3A6NKT7 1758 aaPredicted RBP-1.54□□□□□ -2.66
SCAF11-215ENST00000551391 RGPD4Q7Z3J3 1758 aa-1.54□□□□□ -2.66
SCAF11-215ENST00000551391 HFM1A2PYH4 1435 aa-1.54□□□□□ -2.66
SCAF11-215ENST00000551391 CNTLNQ9NXG0 1405 aa-1.54□□□□□ -2.66
SCAF11-215ENST00000551391 CFAP46Q8IYW2 2715 aa-1.54□□□□□ -2.66
SCAF11-215ENST00000551391 M0QY20 66 aa-1.54□□□□□ -2.66
SCAF11-215ENST00000551391 CRIP1P50238 77 aa-1.54□□□□□ -2.66
SCAF11-215ENST00000551391 MYO9AB2RTY4 2548 aa-1.54□□□□□ -2.66
SCAF11-215ENST00000551391 KIF1AQ12756 1690 aa-1.55□□□□□ -2.66
SCAF11-215ENST00000551391 ZC3H13Q5T200 1668 aaKnown RBP-1.55□□□□□ -2.66
SCAF11-215ENST00000551391 MYH4Q9Y623 1939 aa-1.55□□□□□ -2.66
SCAF11-215ENST00000551391 NCMAPQ5T1S8 102 aa-1.55□□□□□ -2.66
SCAF11-215ENST00000551391 UBL5Q9BZL1 73 aa-1.55□□□□□ -2.66
SCAF11-215ENST00000551391 TMEM131LA2VDJ0 1609 aa-1.55□□□□□ -2.66
SCAF11-215ENST00000551391 INO80Q9ULG1 1556 aaPredicted RBP-1.55□□□□□ -2.66
SCAF11-215ENST00000551391 ARHGAP35Q9NRY4 1499 aa-1.56□□□□□ -2.66
SCAF11-215ENST00000551391 ANKRD36CQ5JPF3 1778 aa-1.56□□□□□ -2.66
SCAF11-215ENST00000551391 PVALEFA0A1B0GWK0 134 aa-1.56□□□□□ -2.66
SCAF11-215ENST00000551391 ATP5EP2Q5VTU8 51 aa-1.56□□□□□ -2.66
SCAF11-215ENST00000551391 C6orf48Q9UBA6 75 aa-1.56□□□□□ -2.66
SCAF11-215ENST00000551391 SMARCA2P51531 1590 aa-1.56□□□□□ -2.66
SCAF11-215ENST00000551391 A8MTW9 85 aa-1.57□□□□□ -2.66
SCAF11-215ENST00000551391 LTN1O94822 1766 aa-1.57□□□□□ -2.66
SCAF11-215ENST00000551391 RALGAPBQ86X10 1494 aa-1.57□□□□□ -2.66
SCAF11-215ENST00000551391 CD163L1Q9NR16 1453 aa-1.57□□□□□ -2.66
SCAF11-215ENST00000551391 LY75O60449 1722 aa-1.57□□□□□ -2.66
SCAF11-215ENST00000551391 SPART-AS1P0CW21 52 aa-1.58□□□□□ -2.66
SCAF11-215ENST00000551391 NCBP2-AS2Q69YL0 99 aa-1.58□□□□□ -2.66
SCAF11-215ENST00000551391 RNF17Q9BXT8 1623 aaKnown RBP-1.58□□□□□ -2.66
SCAF11-215ENST00000551391 ITSN1Q15811 1721 aa-1.59□□□□□ -2.66
SCAF11-215ENST00000551391 FCER1GP30273 86 aa-1.59□□□□□ -2.66
SCAF11-215ENST00000551391 PYY3Q5JQD4 70 aa-1.59□□□□□ -2.66
SCAF11-215ENST00000551391 MED14O60244 1454 aa-1.59□□□□□ -2.66
SCAF11-215ENST00000551391 DDX60LQ5H9U9 1706 aaKnown RBP-1.6□□□□□ -2.67
SCAF11-215ENST00000551391 M0R143 59 aa-1.6□□□□□ -2.67
SCAF11-215ENST00000551391 SFTA3P0C7M3 94 aa-1.6□□□□□ -2.67
SCAF11-215ENST00000551391 PIK3C2BO00750 1634 aa-1.6□□□□□ -2.67
SCAF11-215ENST00000551391 ARFGEF2Q9Y6D5 1785 aa-1.6□□□□□ -2.67
SCAF11-215ENST00000551391 ITPR2Q14571 2701 aa-1.6□□□□□ -2.67
SCAF11-215ENST00000551391 ETDCA0A1B0GVM5 59 aa-1.61□□□□□ -2.67
SCAF11-215ENST00000551391 ATP6V1G2-DDX39BF2Z307 99 aa-1.61□□□□□ -2.67
SCAF11-215ENST00000551391 S100A16Q96FQ6 103 aaKnown RBP-1.61□□□□□ -2.67
SCAF11-215ENST00000551391 DNMBPQ6XZF7 1577 aa-1.61□□□□□ -2.67
SCAF11-215ENST00000551391 LRRIQ1Q96JM4 1722 aa-1.61□□□□□ -2.67
SCAF11-215ENST00000551391 ERVK-7P63135 1459 aa-1.62□□□□□ -2.67
SCAF11-215ENST00000551391 SNHG12Q9BXW3 62 aa-1.62□□□□□ -2.67
SCAF11-215ENST00000551391 PLCH1Q4KWH8 1693 aa-1.63□□□□□ -2.67
SCAF11-215ENST00000551391 A0A087WXM4 84 aa-1.63□□□□□ -2.67
SCAF11-215ENST00000551391 DEFB121Q5J5C9 76 aa-1.63□□□□□ -2.67
SCAF11-215ENST00000551391 KDM5DQ9BY66 1539 aa-1.63□□□□□ -2.67
SCAF11-215ENST00000551391 MYO15AQ9UKN7 3530 aa-1.63□□□□□ -2.67
SCAF11-215ENST00000551391 UBR1Q8IWV7 1749 aa-1.63□□□□□ -2.67
SCAF11-215ENST00000551391 FREM2Q5SZK8 3169 aa-1.63□□□□□ -2.67
SCAF11-215ENST00000551391 PEG3Q9GZU2 1588 aa-1.64□□□□□ -2.67
SCAF11-215ENST00000551391 ATMQ13315 3056 aa-1.64□□□□□ -2.67
SCAF11-215ENST00000551391 SPTAN1Q13813 2472 aaKnown RBP-1.64□□□□□ -2.67
SCAF11-215ENST00000551391 KANTRA0A1W2PQU2 76 aa-1.64□□□□□ -2.67
SCAF11-215ENST00000551391 MT1FP04733 61 aa-1.64□□□□□ -2.67
SCAF11-215ENST00000551391 SMIM13P0DJ93 91 aa-1.64□□□□□ -2.67
SCAF11-215ENST00000551391 RPS29P62273 56 aaKnown RBP-1.64□□□□□ -2.67
SCAF11-215ENST00000551391 TLN1Q9Y490 2541 aaKnown RBP-1.65□□□□□ -2.67
SCAF11-215ENST00000551391 VPS8Q8N3P4 1428 aa-1.65□□□□□ -2.67
SCAF11-215ENST00000551391 DEFB136Q30KP8 78 aa-1.65□□□□□ -2.67
SCAF11-215ENST00000551391 CLASP1Q7Z460 1538 aa-1.66□□□□□ -2.67
SCAF11-215ENST00000551391 NRAPQ86VF7 1730 aa-1.66□□□□□ -2.67
SCAF11-215ENST00000551391 ANKRD26Q9UPS8 1709 aa-1.66□□□□□ -2.67
SCAF11-215ENST00000551391 BOD1L1Q8NFC6 3051 aa-1.66□□□□□ -2.67
SCAF11-215ENST00000551391 TTC37Q6PGP7 1564 aa-1.66□□□□□ -2.68
SCAF11-215ENST00000551391 DEFB114Q30KQ6 69 aa-1.66□□□□□ -2.68
SCAF11-215ENST00000551391 ENHOQ6UWT2 76 aa-1.66□□□□□ -2.68
SCAF11-215ENST00000551391 RICTORQ6R327 1708 aa-1.66□□□□□ -2.68
SCAF11-215ENST00000551391 MAP3K4Q9Y6R4 1608 aa-1.66□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms