RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 C8orf17Q9NRJ1 99 aa8.26□□□□□ -1.09
SLC38A1-204ENST00000546893 A0A087WTM6 91 aa8.26□□□□□ -1.09
SLC38A1-204ENST00000546893 IGLV5-52A0A0A0MRZ9 124 aa8.25□□□□□ -1.09
SLC38A1-204ENST00000546893 A0A1B0GVX0 72 aa8.25□□□□□ -1.09
SLC38A1-204ENST00000546893 DNAH9Q9NYC9 4486 aa8.25□□□□□ -1.09
SLC38A1-204ENST00000546893 IGLV9-49A0A0B4J1Y8 123 aa8.24□□□□□ -1.09
SLC38A1-204ENST00000546893 PANO1I0J062 215 aa8.24□□□□□ -1.09
SLC38A1-204ENST00000546893 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.24□□□□□ -1.09
SLC38A1-204ENST00000546893 A0A087X002 238 aa8.24□□□□□ -1.09
SLC38A1-204ENST00000546893 WWC2-AS2Q96NR7 200 aa8.24□□□□□ -1.09
SLC38A1-204ENST00000546893 ZNF861PO60384 105 aa8.23□□□□□ -1.09
SLC38A1-204ENST00000546893 ALMS1Q8TCU4 4167 aa8.23□□□□□ -1.09
SLC38A1-204ENST00000546893 CSAG1Q6PB30 78 aa8.23□□□□□ -1.09
SLC38A1-204ENST00000546893 MRPL34Q9BQ48 92 aaKnown RBP8.2□□□□□ -1.1
SLC38A1-204ENST00000546893 PSORS1C2Q9UIG4 136 aa8.19□□□□□ -1.1
SLC38A1-204ENST00000546893 TENM2Q9NT68 2774 aa8.18□□□□□ -1.1
SLC38A1-204ENST00000546893 COL7A1Q02388 2944 aa8.16□□□□□ -1.1
SLC38A1-204ENST00000546893 DNAH10Q8IVF4 4471 aa8.16□□□□□ -1.1
SLC38A1-204ENST00000546893 SPATA8Q6RVD6 105 aa8.16□□□□□ -1.1
SLC38A1-204ENST00000546893 IGHV6-1A0A0B4J1U7 121 aa8.15□□□□□ -1.1
SLC38A1-204ENST00000546893 SSBP3-AS1Q7Z2R9 100 aa8.13□□□□□ -1.11
SLC38A1-204ENST00000546893 PRKDCP78527 4128 aaKnown RBP8.12□□□□□ -1.11
SLC38A1-204ENST00000546893 CSMD3Q7Z407 3707 aa8.11□□□□□ -1.11
SLC38A1-204ENST00000546893 IGLV7-43P04211 117 aa8.11□□□□□ -1.11
SLC38A1-204ENST00000546893 MEGF8Q7Z7M0 2845 aa8.1□□□□□ -1.11
SLC38A1-204ENST00000546893 STAB2Q8WWQ8 2551 aa8.1□□□□□ -1.11
SLC38A1-204ENST00000546893 C1orf134Q5TEV5 83 aa8.1□□□□□ -1.11
SLC38A1-204ENST00000546893 MIR22HGQ0VDD5 57 aa8.05□□□□□ -1.12
SLC38A1-204ENST00000546893 VPS13DQ5THJ4 4388 aa8.04□□□□□ -1.12
SLC38A1-204ENST00000546893 SRRM2Q9UQ35 2752 aaKnown RBP8.04□□□□□ -1.12
SLC38A1-204ENST00000546893 A0A1B0GU69 56 aa8.03□□□□□ -1.12
SLC38A1-204ENST00000546893 LYSTQ99698 3801 aa8.03□□□□□ -1.12
SLC38A1-204ENST00000546893 PLECQ15149 4684 aaKnown RBP8.02□□□□□ -1.13
SLC38A1-204ENST00000546893 KRTAP13-3Q3SY46 172 aa8.01□□□□□ -1.13
SLC38A1-204ENST00000546893 ROMO1P60602 79 aa8.01□□□□□ -1.13
SLC38A1-204ENST00000546893 DNAH7Q8WXX0 4024 aa8□□□□□ -1.13
SLC38A1-204ENST00000546893 FAM229AH3BQW9 127 aa7.99□□□□□ -1.13
SLC38A1-204ENST00000546893 CIRBP-AS1Q8TBR5 109 aa7.99□□□□□ -1.13
SLC38A1-204ENST00000546893 UQCR11O14957 56 aa7.98□□□□□ -1.13
SLC38A1-204ENST00000546893 ACYP2P14621 99 aa7.98□□□□□ -1.13
SLC38A1-204ENST00000546893 ANAPC11Q9NYG5 84 aa7.98□□□□□ -1.13
SLC38A1-204ENST00000546893 STARD9Q9P2P6 4700 aa7.97□□□□□ -1.13
SLC38A1-204ENST00000546893 NOTCH2NLQ7Z3S9 236 aa7.97□□□□□ -1.13
SLC38A1-204ENST00000546893 FBN3Q75N90 2809 aa7.97□□□□□ -1.13
SLC38A1-204ENST00000546893 SPINK6Q6UWN8 80 aa7.96□□□□□ -1.13
SLC38A1-204ENST00000546893 DNAH17Q9UFH2 4485 aa7.95□□□□□ -1.14
SLC38A1-204ENST00000546893 Q5W150 140 aa7.92□□□□□ -1.14
SLC38A1-204ENST00000546893 DMAC1Q96GE9 116 aa7.92□□□□□ -1.14
SLC38A1-204ENST00000546893 KRTAP25-1Q3LHN0 102 aa7.89□□□□□ -1.15
SLC38A1-204ENST00000546893 Q6ZSA8 131 aa7.89□□□□□ -1.15
SLC38A1-204ENST00000546893 DNAH8Q96JB1 4490 aa7.88□□□□□ -1.15
SLC38A1-204ENST00000546893 LY6G6CO95867 125 aa7.87□□□□□ -1.15
SLC38A1-204ENST00000546893 IGKV2-30P06310 120 aa7.87□□□□□ -1.15
SLC38A1-204ENST00000546893 HECTD4Q9Y4D8 3996 aa7.87□□□□□ -1.15
SLC38A1-204ENST00000546893 P0C880 135 aa7.86□□□□□ -1.15
SLC38A1-204ENST00000546893 TGP01266 2768 aa7.83□□□□□ -1.16
SLC38A1-204ENST00000546893 KRTAP13-2Q52LG2 175 aa7.83□□□□□ -1.16
SLC38A1-204ENST00000546893 DNAH6Q9C0G6 4158 aa7.82□□□□□ -1.16
SLC38A1-204ENST00000546893 DNAH2Q9P225 4427 aa7.82□□□□□ -1.16
SLC38A1-204ENST00000546893 KRTAP16-1A8MUX0 517 aa7.8□□□□□ -1.16
SLC38A1-204ENST00000546893 KRTAP10-2P60368 255 aa7.8□□□□□ -1.16
SLC38A1-204ENST00000546893 SPINK1P00995 79 aa7.79□□□□□ -1.16
SLC38A1-204ENST00000546893 RPS29P62273 56 aaKnown RBP7.79□□□□□ -1.16
SLC38A1-204ENST00000546893 KMT2AQ03164 3969 aa7.79□□□□□ -1.16
SLC38A1-204ENST00000546893 A8MUU9 505 aa7.76□□□□□ -1.17
SLC38A1-204ENST00000546893 KRTAP1-4P0C5Y4 121 aa7.76□□□□□ -1.17
SLC38A1-204ENST00000546893 KRTAP10-1P60331 282 aa7.74□□□□□ -1.17
SLC38A1-204ENST00000546893 LINC00304Q8N9R0 145 aa7.72□□□□□ -1.17
SLC38A1-204ENST00000546893 TYMSOSQ8TAI1 123 aa7.71□□□□□ -1.18
SLC38A1-204ENST00000546893 FRAS1Q86XX4 4008 aa7.7□□□□□ -1.18
SLC38A1-204ENST00000546893 IGKV2D-30A0A075B6S6 120 aa7.7□□□□□ -1.18
SLC38A1-204ENST00000546893 A0A0A0MQY5 61 aa7.66□□□□□ -1.18
SLC38A1-204ENST00000546893 DNAH11Q96DT5 4516 aa7.66□□□□□ -1.18
SLC38A1-204ENST00000546893 H0YAA0 97 aa7.64□□□□□ -1.19
SLC38A1-204ENST00000546893 DNAH5Q8TE73 4624 aa7.63□□□□□ -1.19
SLC38A1-204ENST00000546893 HYDINQ4G0P3 5121 aa7.63□□□□□ -1.19
SLC38A1-204ENST00000546893 CRIPTQ9P021 101 aa7.62□□□□□ -1.19
SLC38A1-204ENST00000546893 FLG2Q5D862 2391 aaPredicted RBP7.62□□□□□ -1.19
SLC38A1-204ENST00000546893 SACSQ9NZJ4 4579 aa7.56□□□□□ -1.2
SLC38A1-204ENST00000546893 C20orf166-AS1Q96NR2 134 aa7.52□□□□□ -1.21
SLC38A1-204ENST00000546893 PKD1P98161 4303 aa7.51□□□□□ -1.21
SLC38A1-204ENST00000546893 FAT2Q9NYQ8 4349 aa7.51□□□□□ -1.21
SLC38A1-204ENST00000546893 NDUFAF8A1L188 74 aa7.51□□□□□ -1.21
SLC38A1-204ENST00000546893 LRP1BQ9NZR2 4599 aa7.5□□□□□ -1.21
SLC38A1-204ENST00000546893 SPINT4Q6UDR6 99 aa7.44□□□□□ -1.22
SLC38A1-204ENST00000546893 KRTAP15-1Q3LI76 137 aa7.41□□□□□ -1.22
SLC38A1-204ENST00000546893 Q8N1X5 172 aa7.41□□□□□ -1.22
SLC38A1-204ENST00000546893 RYR2Q92736 4967 aa7.41□□□□□ -1.22
SLC38A1-204ENST00000546893 KMT2CQ8NEZ4 4911 aaKnown RBP7.41□□□□□ -1.22
SLC38A1-204ENST00000546893 A0A1B0GU33 70 aa7.4□□□□□ -1.22
SLC38A1-204ENST00000546893 VPS13BQ7Z7G8 4022 aa7.39□□□□□ -1.23
SLC38A1-204ENST00000546893 A0A1B0GVY2 172 aa7.39□□□□□ -1.23
SLC38A1-204ENST00000546893 H1FX-AS1Q4G0G2 97 aa7.36□□□□□ -1.23
SLC38A1-204ENST00000546893 TPRXLQ17RH7 258 aa7.35□□□□□ -1.23
SLC38A1-204ENST00000546893 KRTAP10-4P60372 401 aaPredicted RBP7.33□□□□□ -1.24
SLC38A1-204ENST00000546893 C9orf92A6NGG3 77 aa7.32□□□□□ -1.24
SLC38A1-204ENST00000546893 PKHD1P08F94 4074 aa7.3□□□□□ -1.24
SLC38A1-204ENST00000546893 COX6B2Q6YFQ2 88 aa7.3□□□□□ -1.24
SLC38A1-204ENST00000546893 K7ERS5 55 aa7.29□□□□□ -1.24
SLC38A1-204ENST00000546893 DYNC1H1Q14204 4646 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms