RNA–Protein interactions for RNA: ENST00000544085.5

AFF1-211, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF1, Length 3,644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-211ENST00000544085 Q6ZQT0 140 aa5.01□□□□□ -1.61
AFF1-211ENST00000544085 CIRBP-AS1Q8TBR5 109 aa5.01□□□□□ -1.61
AFF1-211ENST00000544085 A0A1W2PNM2 257 aa5.01□□□□□ -1.61
AFF1-211ENST00000544085 KMT2AQ03164 3969 aa5□□□□□ -1.61
AFF1-211ENST00000544085 ZNF861PO60384 105 aa5□□□□□ -1.61
AFF1-211ENST00000544085 LINC00208Q96KT6 92 aa4.99□□□□□ -1.61
AFF1-211ENST00000544085 A0A1B0GW54 56 aa4.99□□□□□ -1.61
AFF1-211ENST00000544085 IGLV7-43P04211 117 aa4.98□□□□□ -1.61
AFF1-211ENST00000544085 ZCCHC13Q8WW36 166 aaKnown RBP4.98□□□□□ -1.61
AFF1-211ENST00000544085 A0A1B0GVY2 172 aa4.98□□□□□ -1.61
AFF1-211ENST00000544085 P0C880 135 aa4.98□□□□□ -1.61
AFF1-211ENST00000544085 HECTD4Q9Y4D8 3996 aa4.97□□□□□ -1.61
AFF1-211ENST00000544085 IGLV8-61A0A075B6I0 122 aa4.97□□□□□ -1.61
AFF1-211ENST00000544085 MIR22HGQ0VDD5 57 aa4.97□□□□□ -1.61
AFF1-211ENST00000544085 SMIM29Q86T20 159 aa4.97□□□□□ -1.61
AFF1-211ENST00000544085 SPRR4Q96PI1 79 aa4.97□□□□□ -1.61
AFF1-211ENST00000544085 FRAS1Q86XX4 4008 aa4.96□□□□□ -1.62
AFF1-211ENST00000544085 ASB16-AS1Q495Z4 193 aa4.96□□□□□ -1.62
AFF1-211ENST00000544085 DNAH11Q96DT5 4516 aa4.96□□□□□ -1.62
AFF1-211ENST00000544085 DNAH8Q96JB1 4490 aa4.95□□□□□ -1.62
AFF1-211ENST00000544085 CDK2AP2O75956 126 aa4.95□□□□□ -1.62
AFF1-211ENST00000544085 LINC00483Q53H64 154 aa4.95□□□□□ -1.62
AFF1-211ENST00000544085 IGKV4-1P06312 121 aa4.95□□□□□ -1.62
AFF1-211ENST00000544085 RPL37AP61513 92 aaKnown RBP4.95□□□□□ -1.62
AFF1-211ENST00000544085 SACSQ9NZJ4 4579 aa4.95□□□□□ -1.62
AFF1-211ENST00000544085 IGLV9-49A0A0B4J1Y8 123 aa4.95□□□□□ -1.62
AFF1-211ENST00000544085 SEC61BP60468 96 aaKnown RBP4.94□□□□□ -1.62
AFF1-211ENST00000544085 NOTCH2NLQ7Z3S9 236 aa4.94□□□□□ -1.62
AFF1-211ENST00000544085 Q8NBF4 154 aa4.94□□□□□ -1.62
AFF1-211ENST00000544085 SPAG11AQ6PDA7 123 aa4.92□□□□□ -1.62
AFF1-211ENST00000544085 IGFL1Q6UW32 110 aa4.91□□□□□ -1.62
AFF1-211ENST00000544085 KRTAP3-3Q9BYR6 98 aa4.91□□□□□ -1.62
AFF1-211ENST00000544085 KRTAP3-2Q9BYR7 98 aa4.91□□□□□ -1.62
AFF1-211ENST00000544085 HYDINQ4G0P3 5121 aa4.91□□□□□ -1.62
AFF1-211ENST00000544085 DNAH5Q8TE73 4624 aa4.91□□□□□ -1.62
AFF1-211ENST00000544085 FAT2Q9NYQ8 4349 aa4.91□□□□□ -1.62
AFF1-211ENST00000544085 LINC01558Q9Y6Z2 57 aa4.9□□□□□ -1.63
AFF1-211ENST00000544085 RYR2Q92736 4967 aa4.89□□□□□ -1.63
AFF1-211ENST00000544085 NDUFB1O75438 58 aa4.89□□□□□ -1.63
AFF1-211ENST00000544085 PKD1P98161 4303 aa4.88□□□□□ -1.63
AFF1-211ENST00000544085 SPINK6Q6UWN8 80 aa4.87□□□□□ -1.63
AFF1-211ENST00000544085 SSBP3-AS1Q7Z2R9 100 aa4.87□□□□□ -1.63
AFF1-211ENST00000544085 COA5Q86WW8 74 aa4.87□□□□□ -1.63
AFF1-211ENST00000544085 A0A087X002 238 aa4.86□□□□□ -1.63
AFF1-211ENST00000544085 A8MWP4 228 aa4.85□□□□□ -1.63
AFF1-211ENST00000544085 LUZP6Q538Z0 58 aa4.85□□□□□ -1.63
AFF1-211ENST00000544085 A0A087WSZ3 146 aa4.84□□□□□ -1.63
AFF1-211ENST00000544085 NDUFAF8A1L188 74 aa4.84□□□□□ -1.63
AFF1-211ENST00000544085 C8orf17Q9NRJ1 99 aa4.84□□□□□ -1.63
AFF1-211ENST00000544085 DYNC1H1Q14204 4646 aaKnown RBP4.84□□□□□ -1.63
AFF1-211ENST00000544085 ANAPC11Q9NYG5 84 aa4.83□□□□□ -1.64
AFF1-211ENST00000544085 FAM229AH3BQW9 127 aa4.83□□□□□ -1.64
AFF1-211ENST00000544085 SMR3BP02814 79 aaPredicted RBP4.83□□□□□ -1.64
AFF1-211ENST00000544085 A0A0G2JQZ4 141 aa4.82□□□□□ -1.64
AFF1-211ENST00000544085 SPANXA2-OT1Q8N9U9 137 aa4.82□□□□□ -1.64
AFF1-211ENST00000544085 H0Y9P7 68 aa4.8□□□□□ -1.64
AFF1-211ENST00000544085 C20orf166-AS1Q96NR2 134 aa4.8□□□□□ -1.64
AFF1-211ENST00000544085 LRP1BQ9NZR2 4599 aa4.8□□□□□ -1.64
AFF1-211ENST00000544085 SRRM2Q9UQ35 2752 aaKnown RBP4.79□□□□□ -1.64
AFF1-211ENST00000544085 KRTAP1-4P0C5Y4 121 aa4.79□□□□□ -1.64
AFF1-211ENST00000544085 TYMSOSQ8TAI1 123 aa4.78□□□□□ -1.64
AFF1-211ENST00000544085 KRTAP13-2Q52LG2 175 aa4.78□□□□□ -1.64
AFF1-211ENST00000544085 LINC00472Q9H8W2 130 aa4.77□□□□□ -1.65
AFF1-211ENST00000544085 KRTAP10-4P60372 401 aaPredicted RBP4.76□□□□□ -1.65
AFF1-211ENST00000544085 KRTAP25-1Q3LHN0 102 aa4.76□□□□□ -1.65
AFF1-211ENST00000544085 KMT2CQ8NEZ4 4911 aaKnown RBP4.76□□□□□ -1.65
AFF1-211ENST00000544085 DSCR10P59022 87 aa4.75□□□□□ -1.65
AFF1-211ENST00000544085 DEFB116Q30KQ4 102 aa4.74□□□□□ -1.65
AFF1-211ENST00000544085 SPINK1P00995 79 aa4.74□□□□□ -1.65
AFF1-211ENST00000544085 Q5VSD8 79 aa4.74□□□□□ -1.65
AFF1-211ENST00000544085 APOBP04114 4563 aaKnown RBP4.73□□□□□ -1.65
AFF1-211ENST00000544085 RPS29P62273 56 aaKnown RBP4.73□□□□□ -1.65
AFF1-211ENST00000544085 LINC00304Q8N9R0 145 aa4.73□□□□□ -1.65
AFF1-211ENST00000544085 K7EQZ3 153 aa4.72□□□□□ -1.65
AFF1-211ENST00000544085 A8MUU9 505 aa4.72□□□□□ -1.65
AFF1-211ENST00000544085 Q96NJ1 140 aa4.72□□□□□ -1.65
AFF1-211ENST00000544085 PKHD1P08F94 4074 aa4.71□□□□□ -1.66
AFF1-211ENST00000544085 SPATA8Q6RVD6 105 aa4.7□□□□□ -1.66
AFF1-211ENST00000544085 Q8N1X5 172 aa4.7□□□□□ -1.66
AFF1-211ENST00000544085 A0A1B0GVX0 72 aa4.69□□□□□ -1.66
AFF1-211ENST00000544085 VPS13BQ7Z7G8 4022 aa4.68□□□□□ -1.66
AFF1-211ENST00000544085 IGLV7-46A0A075B6I9 117 aa4.68□□□□□ -1.66
AFF1-211ENST00000544085 RYR3Q15413 4870 aa4.68□□□□□ -1.66
AFF1-211ENST00000544085 K7ERS5 55 aa4.67□□□□□ -1.66
AFF1-211ENST00000544085 PKHD1L1Q86WI1 4243 aa4.66□□□□□ -1.66
AFF1-211ENST00000544085 WFDC13Q8IUB5 93 aa4.66□□□□□ -1.66
AFF1-211ENST00000544085 MMP24-AS1A0A0U1RRL7 71 aa4.65□□□□□ -1.67
AFF1-211ENST00000544085 KRTAP29-1A8MX34 341 aaPredicted RBP4.64□□□□□ -1.67
AFF1-211ENST00000544085 RYR1P21817 5038 aa4.64□□□□□ -1.67
AFF1-211ENST00000544085 HRES1P13985 223 aa4.63□□□□□ -1.67
AFF1-211ENST00000544085 PCOTHQ58A44 107 aa4.63□□□□□ -1.67
AFF1-211ENST00000544085 KRTAP10-8P60410 259 aa4.63□□□□□ -1.67
AFF1-211ENST00000544085 SPINT4Q6UDR6 99 aa4.63□□□□□ -1.67
AFF1-211ENST00000544085 TP53AIP1Q9HCN2 124 aa4.62□□□□□ -1.67
AFF1-211ENST00000544085 H3BPC8 53 aa4.61□□□□□ -1.67
AFF1-211ENST00000544085 MRPL34Q9BQ48 92 aaKnown RBP4.61□□□□□ -1.67
AFF1-211ENST00000544085 FLG2Q5D862 2391 aaPredicted RBP4.61□□□□□ -1.67
AFF1-211ENST00000544085 FAT1Q14517 4588 aa4.61□□□□□ -1.67
AFF1-211ENST00000544085 CRIPTQ9P021 101 aa4.61□□□□□ -1.67
AFF1-211ENST00000544085 A0A1B0GU69 56 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms