RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 A0A0G2JQZ4 141 aa5.98□□□□□ -1.45
CLSTN3-209ENST00000539982 OBSCN-AS1Q96MR7 158 aa5.98□□□□□ -1.45
CLSTN3-209ENST00000539982 A0A1B0GV72 72 aa5.96□□□□□ -1.46
CLSTN3-209ENST00000539982 LCE2BO14633 110 aa5.96□□□□□ -1.46
CLSTN3-209ENST00000539982 RBM3P98179 157 aaKnown RBP5.96□□□□□ -1.46
CLSTN3-209ENST00000539982 F8WEM9 126 aa5.95□□□□□ -1.46
CLSTN3-209ENST00000539982 Q75L30 129 aa5.95□□□□□ -1.46
CLSTN3-209ENST00000539982 C14orf132Q9NPU4 83 aa5.95□□□□□ -1.46
CLSTN3-209ENST00000539982 MT2AP02795 61 aa5.94□□□□□ -1.46
CLSTN3-209ENST00000539982 DSCR8Q96T75 97 aa5.94□□□□□ -1.46
CLSTN3-209ENST00000539982 LOC110117498A0A087WWA1 95 aa5.93□□□□□ -1.46
CLSTN3-209ENST00000539982 J3QR89 54 aa5.93□□□□□ -1.46
CLSTN3-209ENST00000539982 TRBV7-4A0A0J9YYF1 115 aa5.92□□□□□ -1.46
CLSTN3-209ENST00000539982 PDE6GP18545 87 aa5.92□□□□□ -1.46
CLSTN3-209ENST00000539982 C21orf62-AS1Q17RA5 79 aa5.91□□□□□ -1.46
CLSTN3-209ENST00000539982 K7ERU9 68 aa5.9□□□□□ -1.46
CLSTN3-209ENST00000539982 CCKP06307 115 aa5.9□□□□□ -1.46
CLSTN3-209ENST00000539982 Q6ZQT0 140 aa5.9□□□□□ -1.46
CLSTN3-209ENST00000539982 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.46
CLSTN3-209ENST00000539982 MT1FP04733 61 aa5.89□□□□□ -1.47
CLSTN3-209ENST00000539982 Q6JHZ5 121 aa5.89□□□□□ -1.47
CLSTN3-209ENST00000539982 LINC00846Q9NV44 126 aa5.88□□□□□ -1.47
CLSTN3-209ENST00000539982 IGFL1Q6UW32 110 aa5.87□□□□□ -1.47
CLSTN3-209ENST00000539982 FAM240AA0A1B0GVK7 77 aa5.86□□□□□ -1.47
CLSTN3-209ENST00000539982 ACYP1P07311 99 aa5.86□□□□□ -1.47
CLSTN3-209ENST00000539982 KRTAP10-10P60014 251 aa5.86□□□□□ -1.47
CLSTN3-209ENST00000539982 VPS25Q9BRG1 176 aa5.86□□□□□ -1.47
CLSTN3-209ENST00000539982 Q96NJ1 140 aa5.85□□□□□ -1.47
CLSTN3-209ENST00000539982 A0A1W2PNM2 257 aa5.84□□□□□ -1.47
CLSTN3-209ENST00000539982 TRBV7-7A0A0K0K1E9 115 aa5.83□□□□□ -1.48
CLSTN3-209ENST00000539982 A0A1B0GW54 56 aa5.83□□□□□ -1.48
CLSTN3-209ENST00000539982 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
CLSTN3-209ENST00000539982 C20orf166-AS1Q96NR2 134 aa5.82□□□□□ -1.48
CLSTN3-209ENST00000539982 A8MUU9 505 aa5.8□□□□□ -1.48
CLSTN3-209ENST00000539982 KRTAP6-3Q3LI67 103 aa5.8□□□□□ -1.48
CLSTN3-209ENST00000539982 FAM236DA0A1B0GTK5 79 aa5.78□□□□□ -1.48
CLSTN3-209ENST00000539982 FAM236CP0DP71 79 aa5.78□□□□□ -1.48
CLSTN3-209ENST00000539982 UBL5Q9BZL1 73 aa5.78□□□□□ -1.48
CLSTN3-209ENST00000539982 A0A087WSZ3 146 aa5.77□□□□□ -1.49
CLSTN3-209ENST00000539982 Q6ZVQ6 151 aa5.76□□□□□ -1.49
CLSTN3-209ENST00000539982 NREPQ16612 68 aa5.75□□□□□ -1.49
CLSTN3-209ENST00000539982 LINC00643Q86TS7 51 aa5.75□□□□□ -1.49
CLSTN3-209ENST00000539982 RBM12B-AS1Q9P1G2 102 aa5.74□□□□□ -1.49
CLSTN3-209ENST00000539982 KRTAP16-1A8MUX0 517 aa5.73□□□□□ -1.49
CLSTN3-209ENST00000539982 MPLKIPQ8TAP9 179 aa5.73□□□□□ -1.49
CLSTN3-209ENST00000539982 SS18L2Q9UHA2 77 aa5.73□□□□□ -1.49
CLSTN3-209ENST00000539982 NEBP20929 6669 aa5.73□□□□□ -1.49
CLSTN3-209ENST00000539982 ATP5EP2Q5VTU8 51 aa5.71□□□□□ -1.5
CLSTN3-209ENST00000539982 HRES1P13985 223 aa5.7□□□□□ -1.5
CLSTN3-209ENST00000539982 IGKV3D-7A0A0C4DH55 119 aa5.69□□□□□ -1.5
CLSTN3-209ENST00000539982 BPY2O14599 106 aa5.69□□□□□ -1.5
CLSTN3-209ENST00000539982 MT-ATP8P03928 68 aa5.69□□□□□ -1.5
CLSTN3-209ENST00000539982 CXCL6P80162 114 aa5.69□□□□□ -1.5
CLSTN3-209ENST00000539982 LINC00472Q9H8W2 130 aa5.69□□□□□ -1.5
CLSTN3-209ENST00000539982 SIGMAR1Q99720 223 aa5.68□□□□□ -1.5
CLSTN3-209ENST00000539982 J3KT08 172 aa5.67□□□□□ -1.5
CLSTN3-209ENST00000539982 DSCR10P59022 87 aa5.67□□□□□ -1.5
CLSTN3-209ENST00000539982 DEFB116Q30KQ4 102 aa5.66□□□□□ -1.5
CLSTN3-209ENST00000539982 NOTCH2NLQ7Z3S9 236 aa5.66□□□□□ -1.5
CLSTN3-209ENST00000539982 IGKV4-1P06312 121 aa5.64□□□□□ -1.51
CLSTN3-209ENST00000539982 IMUPQ9GZP8 106 aa5.64□□□□□ -1.51
CLSTN3-209ENST00000539982 LINC00313P59037 77 aa5.63□□□□□ -1.51
CLSTN3-209ENST00000539982 A8MWP4 228 aa5.62□□□□□ -1.51
CLSTN3-209ENST00000539982 HIST1H4AP62805 103 aaKnown RBP5.62□□□□□ -1.51
CLSTN3-209ENST00000539982 NDUFB1O75438 58 aa5.61□□□□□ -1.51
CLSTN3-209ENST00000539982 Q8N9L7 120 aa5.61□□□□□ -1.51
CLSTN3-209ENST00000539982 K7EQZ3 153 aa5.6□□□□□ -1.51
CLSTN3-209ENST00000539982 PRR15Q8IV56 129 aa5.59□□□□□ -1.51
CLSTN3-209ENST00000539982 A0A087WVE0 104 aa5.57□□□□□ -1.52
CLSTN3-209ENST00000539982 A0A1B0GVX0 72 aa5.57□□□□□ -1.52
CLSTN3-209ENST00000539982 Q8N9P0 234 aaPredicted RBP5.56□□□□□ -1.52
CLSTN3-209ENST00000539982 IGHV6-1A0A0B4J1U7 121 aa5.55□□□□□ -1.52
CLSTN3-209ENST00000539982 HCG22E2RYF7 251 aa5.54□□□□□ -1.52
CLSTN3-209ENST00000539982 KRTAP20-1Q3LI63 56 aa5.54□□□□□ -1.52
CLSTN3-209ENST00000539982 FAM236AA0A1B0GUQ0 79 aa5.53□□□□□ -1.52
CLSTN3-209ENST00000539982 FAM236BA0A1B0GV22 79 aa5.53□□□□□ -1.52
CLSTN3-209ENST00000539982 C8orf87E5RJ46 101 aa5.53□□□□□ -1.52
CLSTN3-209ENST00000539982 SCGB1A1P11684 91 aa5.53□□□□□ -1.52
CLSTN3-209ENST00000539982 C8orf17Q9NRJ1 99 aa5.53□□□□□ -1.52
CLSTN3-209ENST00000539982 MMP24-AS1A0A0U1RRL7 71 aa5.52□□□□□ -1.53
CLSTN3-209ENST00000539982 CASC2Q6XLA1 102 aa5.51□□□□□ -1.53
CLSTN3-209ENST00000539982 MUC12Q9UKN1 5478 aa5.51□□□□□ -1.53
CLSTN3-209ENST00000539982 hDV103S1A0JD37 113 aa5.5□□□□□ -1.53
CLSTN3-209ENST00000539982 SPINK7P58062 85 aa5.5□□□□□ -1.53
CLSTN3-209ENST00000539982 WFDC13Q8IUB5 93 aa5.5□□□□□ -1.53
CLSTN3-209ENST00000539982 TMEM254Q8TBM7 123 aa5.48□□□□□ -1.53
CLSTN3-209ENST00000539982 ATOX1O00244 68 aa5.47□□□□□ -1.53
CLSTN3-209ENST00000539982 ZCCHC13Q8WW36 166 aaKnown RBP5.46□□□□□ -1.54
CLSTN3-209ENST00000539982 MRPL34Q9BQ48 92 aaKnown RBP5.46□□□□□ -1.54
CLSTN3-209ENST00000539982 SMIM20Q8N5G0 67 aa5.44□□□□□ -1.54
CLSTN3-209ENST00000539982 NDUFS5O43920 106 aa5.42□□□□□ -1.54
CLSTN3-209ENST00000539982 ANAPC13Q9BS18 74 aa5.42□□□□□ -1.54
CLSTN3-209ENST00000539982 OCR1Q9BZK8 76 aa5.42□□□□□ -1.54
CLSTN3-209ENST00000539982 TRAV7A0A075B6U4 112 aa5.41□□□□□ -1.54
CLSTN3-209ENST00000539982 A6NN06 94 aa5.4□□□□□ -1.54
CLSTN3-209ENST00000539982 UQCRQO14949 82 aa5.4□□□□□ -1.54
CLSTN3-209ENST00000539982 TP53AIP1Q9HCN2 124 aa5.4□□□□□ -1.54
CLSTN3-209ENST00000539982 SERP2Q8N6R1 65 aa5.39□□□□□ -1.55
CLSTN3-209ENST00000539982 KRTAP5-9P26371 169 aa5.36□□□□□ -1.55
CLSTN3-209ENST00000539982 COX7CP15954 63 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms