RNA–Protein interactions for RNA: ENST00000538418.1

CD9-207, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-207ENST00000538418 UNQ6190/PRO20217Q6UXQ8 127 aa4.02□□□□□ -1.77
CD9-207ENST00000538418 GTF2H5Q6ZYL4 71 aa4.02□□□□□ -1.77
CD9-207ENST00000538418 C6orf48Q9UBA6 75 aa4.02□□□□□ -1.77
CD9-207ENST00000538418 SEC11AP67812 179 aa4.01□□□□□ -1.77
CD9-207ENST00000538418 Q6ZUT4 128 aa4.01□□□□□ -1.77
CD9-207ENST00000538418 SMIM2Q9BVW6 85 aa4.01□□□□□ -1.77
CD9-207ENST00000538418 RPL39P62891 51 aaKnown RBP4□□□□□ -1.77
CD9-207ENST00000538418 TMEM141Q96I45 108 aa4□□□□□ -1.77
CD9-207ENST00000538418 ADCYAP1P18509 176 aa3.99□□□□□ -1.77
CD9-207ENST00000538418 KRTAP5-11Q6L8G4 156 aa3.99□□□□□ -1.77
CD9-207ENST00000538418 UQCR10Q9UDW1 63 aa3.99□□□□□ -1.77
CD9-207ENST00000538418 ERG28Q9UKR5 140 aa3.99□□□□□ -1.77
CD9-207ENST00000538418 D6R8Y8 96 aa3.98□□□□□ -1.77
CD9-207ENST00000538418 Q8IZM0 81 aa3.98□□□□□ -1.77
CD9-207ENST00000538418 VAMP8Q9BV40 100 aa3.98□□□□□ -1.77
CD9-207ENST00000538418 C22orf24Q9Y442 160 aa3.98□□□□□ -1.77
CD9-207ENST00000538418 LINC01549A6NIU2 74 aa3.97□□□□□ -1.77
CD9-207ENST00000538418 ADIRFQ15847 76 aa3.97□□□□□ -1.77
CD9-207ENST00000538418 AMELXQ99217 191 aa3.97□□□□□ -1.77
CD9-207ENST00000538418 FAT4Q6V0I7 4981 aa3.96□□□□□ -1.78
CD9-207ENST00000538418 F8VRH5 84 aa3.96□□□□□ -1.78
CD9-207ENST00000538418 BCE1O60756 84 aa3.96□□□□□ -1.78
CD9-207ENST00000538418 TEN1Q86WV5 123 aa3.96□□□□□ -1.78
CD9-207ENST00000538418 Q8N8P6 123 aa3.95□□□□□ -1.78
CD9-207ENST00000538418 IGIPA6NJ69 53 aa3.94□□□□□ -1.78
CD9-207ENST00000538418 MRPL54Q6P161 138 aaKnown RBP3.94□□□□□ -1.78
CD9-207ENST00000538418 NXT2Q9NPJ8 142 aaKnown RBP3.94□□□□□ -1.78
CD9-207ENST00000538418 HSD52Q0P140 79 aa3.93□□□□□ -1.78
CD9-207ENST00000538418 KRTAP13-4Q3LI77 160 aa3.93□□□□□ -1.78
CD9-207ENST00000538418 FAM19A2Q8N3H0 131 aa3.93□□□□□ -1.78
CD9-207ENST00000538418 ZCCHC13Q8WW36 166 aaKnown RBP3.93□□□□□ -1.78
CD9-207ENST00000538418 TOMM7Q9P0U1 55 aa3.93□□□□□ -1.78
CD9-207ENST00000538418 SPAG11AQ6PDA7 123 aa3.92□□□□□ -1.78
CD9-207ENST00000538418 SPANXDQ9BXN6 97 aa3.92□□□□□ -1.78
CD9-207ENST00000538418 CDKN2A-AS1Q9UH64 79 aa3.92□□□□□ -1.78
CD9-207ENST00000538418 KRTAP13-1Q8IUC0 172 aa3.91□□□□□ -1.78
CD9-207ENST00000538418 MUC17Q685J3 4493 aa3.9□□□□□ -1.79
CD9-207ENST00000538418 FAM236AA0A1B0GUQ0 79 aa3.9□□□□□ -1.79
CD9-207ENST00000538418 FAM236BA0A1B0GV22 79 aa3.9□□□□□ -1.79
CD9-207ENST00000538418 COX17Q14061 63 aa3.9□□□□□ -1.79
CD9-207ENST00000538418 PMCHL1Q16048 86 aa3.9□□□□□ -1.79
CD9-207ENST00000538418 ASB16-AS1Q495Z4 193 aa3.9□□□□□ -1.79
CD9-207ENST00000538418 SFTA2Q6UW10 78 aa3.9□□□□□ -1.79
CD9-207ENST00000538418 ZNF625Q96I27 306 aaPredicted RBP3.9□□□□□ -1.79
CD9-207ENST00000538418 H3BRM9 83 aa3.89□□□□□ -1.79
CD9-207ENST00000538418 MIR22HGQ0VDD5 57 aa3.89□□□□□ -1.79
CD9-207ENST00000538418 CASC2Q6XLA1 102 aa3.89□□□□□ -1.79
CD9-207ENST00000538418 COX7B2Q8TF08 81 aa3.89□□□□□ -1.79
CD9-207ENST00000538418 LOC107984156A0A0G2JMH3 177 aa3.88□□□□□ -1.79
CD9-207ENST00000538418 SPATA45Q537H7 98 aa3.88□□□□□ -1.79
CD9-207ENST00000538418 ARL17AQ8IVW1 177 aa3.88□□□□□ -1.79
CD9-207ENST00000538418 ORMDL1Q9P0S3 153 aa3.88□□□□□ -1.79
CD9-207ENST00000538418 LINC01546A6NGU7 62 aa3.87□□□□□ -1.79
CD9-207ENST00000538418 IGLC3P0DOY3 106 aa3.87□□□□□ -1.79
CD9-207ENST00000538418 PMCHL2Q9BQD1 86 aa3.87□□□□□ -1.79
CD9-207ENST00000538418 K7EP34 96 aa3.86□□□□□ -1.79
CD9-207ENST00000538418 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.86□□□□□ -1.79
CD9-207ENST00000538418 SPINK1P00995 79 aa3.85□□□□□ -1.79
CD9-207ENST00000538418 SPINK8P0C7L1 97 aa3.85□□□□□ -1.79
CD9-207ENST00000538418 KRTAP6-3Q3LI67 103 aa3.85□□□□□ -1.79
CD9-207ENST00000538418 PCOTHQ58A44 107 aa3.85□□□□□ -1.79
CD9-207ENST00000538418 F8W1H4 67 aa3.84□□□□□ -1.79
CD9-207ENST00000538418 RPS29P62273 56 aaKnown RBP3.84□□□□□ -1.79
CD9-207ENST00000538418 A6NN06 94 aa3.83□□□□□ -1.8
CD9-207ENST00000538418 COX7CP15954 63 aa3.83□□□□□ -1.8
CD9-207ENST00000538418 NDUFA12Q9UI09 145 aa3.83□□□□□ -1.8
CD9-207ENST00000538418 CDC42SE1Q9NRR8 79 aa3.82□□□□□ -1.8
CD9-207ENST00000538418 FSIP2Q5CZC0 6907 aa3.82□□□□□ -1.8
CD9-207ENST00000538418 PRLHP81277 87 aa3.81□□□□□ -1.8
CD9-207ENST00000538418 PP632Q6XCG6 107 aa3.81□□□□□ -1.8
CD9-207ENST00000538418 SSBP3-AS1Q7Z2R9 100 aa3.81□□□□□ -1.8
CD9-207ENST00000538418 SPRR4Q96PI1 79 aa3.81□□□□□ -1.8
CD9-207ENST00000538418 KCNQ1DNQ9H478 68 aa3.81□□□□□ -1.8
CD9-207ENST00000538418 TRBV20-1A0A075B6N2 111 aa3.8□□□□□ -1.8
CD9-207ENST00000538418 IFITM1P13164 125 aa3.8□□□□□ -1.8
CD9-207ENST00000538418 BVES-AS1Q5T3Y7 98 aa3.8□□□□□ -1.8
CD9-207ENST00000538418 NAA38Q9BRA0 125 aaKnown RBP3.8□□□□□ -1.8
CD9-207ENST00000538418 SPCS1Q9Y6A9 102 aa3.8□□□□□ -1.8
CD9-207ENST00000538418 SPRR1AP35321 89 aa3.79□□□□□ -1.8
CD9-207ENST00000538418 KRTDAPP60985 99 aa3.79□□□□□ -1.8
CD9-207ENST00000538418 MEIG1Q5JSS6 88 aa3.79□□□□□ -1.8
CD9-207ENST00000538418 A0A1W2PPM0 123 aa3.78□□□□□ -1.8
CD9-207ENST00000538418 SNCGO76070 127 aa3.78□□□□□ -1.8
CD9-207ENST00000538418 LINC00158P58513 81 aa3.78□□□□□ -1.8
CD9-207ENST00000538418 BAGE3Q86Y29 109 aa3.78□□□□□ -1.8
CD9-207ENST00000538418 KRTAP12-1P59990 96 aa3.77□□□□□ -1.81
CD9-207ENST00000538418 ETDCA0A1B0GVM5 59 aa3.76□□□□□ -1.81
CD9-207ENST00000538418 TMEM170BQ5T4T1 132 aa3.76□□□□□ -1.81
CD9-207ENST00000538418 ATOH7Q8N100 152 aa3.76□□□□□ -1.81
CD9-207ENST00000538418 C18orf32Q8TCD1 76 aa3.76□□□□□ -1.81
CD9-207ENST00000538418 H3BUT2 72 aa3.75□□□□□ -1.81
CD9-207ENST00000538418 SMIM13P0DJ93 91 aa3.74□□□□□ -1.81
CD9-207ENST00000538418 SNURFQ9Y675 71 aa3.74□□□□□ -1.81
CD9-207ENST00000538418 MYMXA0A1B0GTQ4 84 aa3.73□□□□□ -1.81
CD9-207ENST00000538418 CCDC179H3BU77 68 aa3.73□□□□□ -1.81
CD9-207ENST00000538418 PPDPFLQ8WWR9 84 aa3.73□□□□□ -1.81
CD9-207ENST00000538418 CRCT1Q9UGL9 99 aa3.73□□□□□ -1.81
CD9-207ENST00000538418 TRBV10-3A0A0K0K1G6 114 aa3.72□□□□□ -1.81
CD9-207ENST00000538418 SYS1-DBNDD2H3BUS1 97 aa3.72□□□□□ -1.81
CD9-207ENST00000538418 C3orf79P0CE67 100 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms