RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 TLX1NBP0CAT3 122 aa6.44□□□□□ -1.38
RTN3-208ENST00000537981 MEGF8Q7Z7M0 2845 aa6.43□□□□□ -1.38
RTN3-208ENST00000537981 KRTAP16-1A8MUX0 517 aa6.43□□□□□ -1.38
RTN3-208ENST00000537981 DNAH9Q9NYC9 4486 aa6.43□□□□□ -1.38
RTN3-208ENST00000537981 Q5W150 140 aa6.42□□□□□ -1.38
RTN3-208ENST00000537981 C1orf134Q5TEV5 83 aa6.42□□□□□ -1.38
RTN3-208ENST00000537981 SPATA8Q6RVD6 105 aa6.42□□□□□ -1.38
RTN3-208ENST00000537981 FRAS1Q86XX4 4008 aa6.41□□□□□ -1.38
RTN3-208ENST00000537981 CMYA5Q8N3K9 4069 aa6.41□□□□□ -1.38
RTN3-208ENST00000537981 C8orf17Q9NRJ1 99 aa6.41□□□□□ -1.38
RTN3-208ENST00000537981 FLG2Q5D862 2391 aaPredicted RBP6.4□□□□□ -1.38
RTN3-208ENST00000537981 DEFB131BA0A096LNP1 70 aa6.39□□□□□ -1.39
RTN3-208ENST00000537981 A0A1B0GU69 56 aa6.39□□□□□ -1.39
RTN3-208ENST00000537981 FBN3Q75N90 2809 aa6.38□□□□□ -1.39
RTN3-208ENST00000537981 MIR22HGQ0VDD5 57 aa6.38□□□□□ -1.39
RTN3-208ENST00000537981 TP53AIP1Q9HCN2 124 aa6.37□□□□□ -1.39
RTN3-208ENST00000537981 LINC01556Q5JQF7 62 aa6.36□□□□□ -1.39
RTN3-208ENST00000537981 ZNF861PO60384 105 aa6.36□□□□□ -1.39
RTN3-208ENST00000537981 MRPL34Q9BQ48 92 aaKnown RBP6.33□□□□□ -1.4
RTN3-208ENST00000537981 TGP01266 2768 aa6.32□□□□□ -1.4
RTN3-208ENST00000537981 DNAH7Q8WXX0 4024 aa6.31□□□□□ -1.4
RTN3-208ENST00000537981 A0A1B0GVX0 72 aa6.31□□□□□ -1.4
RTN3-208ENST00000537981 ACYP2P14621 99 aa6.31□□□□□ -1.4
RTN3-208ENST00000537981 KRTAP13-3Q3SY46 172 aa6.31□□□□□ -1.4
RTN3-208ENST00000537981 ROMO1P60602 79 aa6.3□□□□□ -1.4
RTN3-208ENST00000537981 UQCR11O14957 56 aa6.3□□□□□ -1.4
RTN3-208ENST00000537981 PRKDCP78527 4128 aaKnown RBP6.29□□□□□ -1.4
RTN3-208ENST00000537981 SPRR1BP22528 89 aa6.29□□□□□ -1.4
RTN3-208ENST00000537981 DNAH8Q96JB1 4490 aa6.28□□□□□ -1.4
RTN3-208ENST00000537981 CRIPTQ9P021 101 aa6.28□□□□□ -1.4
RTN3-208ENST00000537981 P0C880 135 aa6.27□□□□□ -1.41
RTN3-208ENST00000537981 DNAH10OSP0CZ25 163 aa6.27□□□□□ -1.41
RTN3-208ENST00000537981 LCE2AQ5TA79 106 aaPredicted RBP6.27□□□□□ -1.41
RTN3-208ENST00000537981 DMAC1Q96GE9 116 aa6.27□□□□□ -1.41
RTN3-208ENST00000537981 LCE2CQ5TA81 110 aa6.26□□□□□ -1.41
RTN3-208ENST00000537981 KRTAP10-11P60412 298 aa6.26□□□□□ -1.41
RTN3-208ENST00000537981 ANAPC11Q9NYG5 84 aa6.26□□□□□ -1.41
RTN3-208ENST00000537981 SPINK6Q6UWN8 80 aa6.25□□□□□ -1.41
RTN3-208ENST00000537981 H3BNG1 76 aa6.24□□□□□ -1.41
RTN3-208ENST00000537981 LUZP6Q538Z0 58 aa6.23□□□□□ -1.41
RTN3-208ENST00000537981 DNAH17Q9UFH2 4485 aa6.23□□□□□ -1.41
RTN3-208ENST00000537981 KRTAP25-1Q3LHN0 102 aa6.22□□□□□ -1.41
RTN3-208ENST00000537981 DNAH3Q8TD57 4116 aa6.21□□□□□ -1.41
RTN3-208ENST00000537981 PANO1I0J062 215 aa6.21□□□□□ -1.42
RTN3-208ENST00000537981 KRTAP1-5Q9BYS1 174 aa6.19□□□□□ -1.42
RTN3-208ENST00000537981 A8MUU9 505 aa6.18□□□□□ -1.42
RTN3-208ENST00000537981 LINC00304Q8N9R0 145 aa6.17□□□□□ -1.42
RTN3-208ENST00000537981 KRTAP13-1Q8IUC0 172 aa6.16□□□□□ -1.42
RTN3-208ENST00000537981 STAB2Q8WWQ8 2551 aa6.15□□□□□ -1.42
RTN3-208ENST00000537981 IGLV7-43P04211 117 aa6.15□□□□□ -1.42
RTN3-208ENST00000537981 SPINK1P00995 79 aa6.15□□□□□ -1.43
RTN3-208ENST00000537981 H0YAA0 97 aa6.14□□□□□ -1.43
RTN3-208ENST00000537981 KMT2AQ03164 3969 aa6.14□□□□□ -1.43
RTN3-208ENST00000537981 HUWE1Q7Z6Z7 4374 aaKnown RBP6.12□□□□□ -1.43
RTN3-208ENST00000537981 HECTD4Q9Y4D8 3996 aa6.1□□□□□ -1.43
RTN3-208ENST00000537981 Q6ZSA8 131 aa6.09□□□□□ -1.43
RTN3-208ENST00000537981 IGKV2-30P06310 120 aa6.08□□□□□ -1.44
RTN3-208ENST00000537981 LCE2BO14633 110 aa6.07□□□□□ -1.44
RTN3-208ENST00000537981 CIRBP-AS1Q8TBR5 109 aa6.07□□□□□ -1.44
RTN3-208ENST00000537981 IGKV2D-30A0A075B6S6 120 aa6.07□□□□□ -1.44
RTN3-208ENST00000537981 LINC00483Q53H64 154 aa6.06□□□□□ -1.44
RTN3-208ENST00000537981 VPS13DQ5THJ4 4388 aa6.06□□□□□ -1.44
RTN3-208ENST00000537981 K7ERS5 55 aa6.06□□□□□ -1.44
RTN3-208ENST00000537981 TYMSOSQ8TAI1 123 aa6.04□□□□□ -1.44
RTN3-208ENST00000537981 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.04□□□□□ -1.44
RTN3-208ENST00000537981 Q8N1X5 172 aa6.03□□□□□ -1.44
RTN3-208ENST00000537981 C14orf177Q52M58 125 aa6.02□□□□□ -1.45
RTN3-208ENST00000537981 PLECQ15149 4684 aaKnown RBP6.01□□□□□ -1.45
RTN3-208ENST00000537981 SSBP3-AS1Q7Z2R9 100 aa6□□□□□ -1.45
RTN3-208ENST00000537981 DMBT1Q9UGM3 2413 aaPredicted RBP6□□□□□ -1.45
RTN3-208ENST00000537981 NDUFAF8A1L188 74 aa5.99□□□□□ -1.45
RTN3-208ENST00000537981 C20orf166-AS1Q96NR2 134 aa5.99□□□□□ -1.45
RTN3-208ENST00000537981 PSORS1C2Q9UIG4 136 aa5.99□□□□□ -1.45
RTN3-208ENST00000537981 STARD9Q9P2P6 4700 aa5.98□□□□□ -1.45
RTN3-208ENST00000537981 CAMK2N1Q7Z7J9 78 aa5.98□□□□□ -1.45
RTN3-208ENST00000537981 KMT2CQ8NEZ4 4911 aaKnown RBP5.98□□□□□ -1.45
RTN3-208ENST00000537981 LY6G6CO95867 125 aa5.96□□□□□ -1.45
RTN3-208ENST00000537981 A0A087WTM6 91 aa5.93□□□□□ -1.46
RTN3-208ENST00000537981 DNAH6Q9C0G6 4158 aa5.93□□□□□ -1.46
RTN3-208ENST00000537981 DNAH2Q9P225 4427 aa5.92□□□□□ -1.46
RTN3-208ENST00000537981 SPINT4Q6UDR6 99 aa5.92□□□□□ -1.46
RTN3-208ENST00000537981 TPRXLQ17RH7 258 aa5.9□□□□□ -1.46
RTN3-208ENST00000537981 A0A1B0GU33 70 aa5.9□□□□□ -1.47
RTN3-208ENST00000537981 SPACA4Q8TDM5 124 aa5.9□□□□□ -1.47
RTN3-208ENST00000537981 C10orf95Q9H7T3 257 aa5.9□□□□□ -1.47
RTN3-208ENST00000537981 RYR3Q15413 4870 aa5.87□□□□□ -1.47
RTN3-208ENST00000537981 HYDINQ4G0P3 5121 aa5.87□□□□□ -1.47
RTN3-208ENST00000537981 H1FX-AS1Q4G0G2 97 aa5.86□□□□□ -1.47
RTN3-208ENST00000537981 DNAH11Q96DT5 4516 aa5.85□□□□□ -1.47
RTN3-208ENST00000537981 KRTAP15-1Q3LI76 137 aa5.85□□□□□ -1.47
RTN3-208ENST00000537981 UBE2DNLQ8IWF7 75 aa5.83□□□□□ -1.48
RTN3-208ENST00000537981 LORP23490 312 aaPredicted RBP5.82□□□□□ -1.48
RTN3-208ENST00000537981 DYNC2H1Q8NCM8 4307 aaKnown RBP5.82□□□□□ -1.48
RTN3-208ENST00000537981 SACSQ9NZJ4 4579 aa5.82□□□□□ -1.48
RTN3-208ENST00000537981 NUPR2A6NF83 97 aa5.79□□□□□ -1.48
RTN3-208ENST00000537981 KRTAP3-1Q9BYR8 98 aa5.79□□□□□ -1.48
RTN3-208ENST00000537981 Q6ZRN7 208 aaPredicted RBP5.79□□□□□ -1.48
RTN3-208ENST00000537981 RYR2Q92736 4967 aa5.78□□□□□ -1.48
RTN3-208ENST00000537981 COX6B2Q6YFQ2 88 aa5.78□□□□□ -1.48
RTN3-208ENST00000537981 LRP1BQ9NZR2 4599 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms